RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 KCNAB3O43448 404 aa4.53□□□□□ -1.68
PRPF38A-203ENST00000487160 GOSR1O95249 250 aa4.53□□□□□ -1.68
PRPF38A-203ENST00000487160 FRMD6-AS1P0C7T7 363 aa4.53□□□□□ -1.68
PRPF38A-203ENST00000487160 STAG3L1P0CL83 205 aa4.53□□□□□ -1.68
PRPF38A-203ENST00000487160 TGFB3P10600 412 aa4.53□□□□□ -1.68
PRPF38A-203ENST00000487160 RPL21P46778 160 aaKnown RBP4.53□□□□□ -1.68
PRPF38A-203ENST00000487160 VAMP7P51809 220 aa4.53□□□□□ -1.68
PRPF38A-203ENST00000487160 KLC1Q07866 573 aa4.53□□□□□ -1.68
PRPF38A-203ENST00000487160 ZNF672Q499Z4 452 aaPredicted RBP4.53□□□□□ -1.68
PRPF38A-203ENST00000487160 XKR3Q5GH77 459 aa4.53□□□□□ -1.68
PRPF38A-203ENST00000487160 WDR38Q5JTN6 314 aa4.53□□□□□ -1.68
PRPF38A-203ENST00000487160 CCDC158Q5M9N0 1113 aa4.53□□□□□ -1.68
PRPF38A-203ENST00000487160 CCNYL2Q5T2Q4 361 aa4.53□□□□□ -1.68
PRPF38A-203ENST00000487160 SUSD4Q5VX71 490 aa4.53□□□□□ -1.68
PRPF38A-203ENST00000487160 AMIGO1Q86WK6 493 aa4.53□□□□□ -1.68
PRPF38A-203ENST00000487160 C4orf19Q8IY42 314 aa4.53□□□□□ -1.68
PRPF38A-203ENST00000487160 NDUFAF2Q8N183 169 aa4.53□□□□□ -1.68
PRPF38A-203ENST00000487160 ZNF383Q8NA42 475 aa4.53□□□□□ -1.68
PRPF38A-203ENST00000487160 DBF4BQ8NFT6 615 aa4.53□□□□□ -1.68
PRPF38A-203ENST00000487160 OR10Q1Q8NGQ4 319 aa4.53□□□□□ -1.68
PRPF38A-203ENST00000487160 ZMYND12Q9H0C1 365 aa4.53□□□□□ -1.68
PRPF38A-203ENST00000487160 TMEM206Q9H813 350 aa4.53□□□□□ -1.68
PRPF38A-203ENST00000487160 ZNF556Q9HAH1 456 aa4.53□□□□□ -1.68
PRPF38A-203ENST00000487160 FGF21Q9NSA1 209 aa4.53□□□□□ -1.68
PRPF38A-203ENST00000487160 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.53□□□□□ -1.68
PRPF38A-203ENST00000487160 LMO7Q8WWI1 1683 aa4.53□□□□□ -1.68
PRPF38A-203ENST00000487160 TUBGCP6Q96RT7 1819 aa4.53□□□□□ -1.68
PRPF38A-203ENST00000487160 COL24A1Q17RW2 1714 aa4.52□□□□□ -1.69
PRPF38A-203ENST00000487160 C2orf81A6NN90 581 aa4.52□□□□□ -1.69
PRPF38A-203ENST00000487160 SLC22A2O15244 555 aa4.52□□□□□ -1.69
PRPF38A-203ENST00000487160 DDHD2O94830 711 aa4.52□□□□□ -1.69
PRPF38A-203ENST00000487160 PLGP00747 810 aaPredicted RBP4.52□□□□□ -1.69
PRPF38A-203ENST00000487160 SERPING1P05155 500 aa4.52□□□□□ -1.69
PRPF38A-203ENST00000487160 ANKRD34CP0C6C1 535 aa4.52□□□□□ -1.69
PRPF38A-203ENST00000487160 EPORP19235 508 aa4.52□□□□□ -1.69
PRPF38A-203ENST00000487160 CSTF2P33240 577 aaKnown RBP eCLIP4.52□□□□□ -1.69
PRPF38A-203ENST00000487160 CDX1P47902 265 aaPredicted RBP4.52□□□□□ -1.69
PRPF38A-203ENST00000487160 GAS1P54826 345 aa4.52□□□□□ -1.69
PRPF38A-203ENST00000487160 MAZP56270 477 aaKnown RBP4.52□□□□□ -1.69
PRPF38A-203ENST00000487160 GCNT1Q02742 428 aa4.52□□□□□ -1.69
PRPF38A-203ENST00000487160 C17orf67Q0P5P2 114 aa4.52□□□□□ -1.69
PRPF38A-203ENST00000487160 HERC3Q15034 1050 aa4.52□□□□□ -1.69
PRPF38A-203ENST00000487160 ZNF718Q3SXZ3 478 aa4.52□□□□□ -1.69
PRPF38A-203ENST00000487160 ZC2HC1CQ53FD0 456 aaPredicted RBP4.52□□□□□ -1.69
PRPF38A-203ENST00000487160 SPOUT1Q5T280 376 aaKnown RBP4.52□□□□□ -1.69
PRPF38A-203ENST00000487160 OR4A47Q6IF82 309 aa4.52□□□□□ -1.69
PRPF38A-203ENST00000487160 KIAA1161Q6NSJ0 714 aa4.52□□□□□ -1.69
PRPF38A-203ENST00000487160 CASC4Q6P4E1 433 aa4.52□□□□□ -1.69
PRPF38A-203ENST00000487160 BTNL8Q6UX41 500 aa4.52□□□□□ -1.69
PRPF38A-203ENST00000487160 IL17RELQ6ZVW7 336 aa4.52□□□□□ -1.69
PRPF38A-203ENST00000487160 C9orf106Q8NAJ2 232 aa4.52□□□□□ -1.69
PRPF38A-203ENST00000487160 NOA1Q8NC60 698 aaKnown RBP4.52□□□□□ -1.69
PRPF38A-203ENST00000487160 KLHDC9Q8NEP7 349 aa4.52□□□□□ -1.69
PRPF38A-203ENST00000487160 OR52N5Q8NH56 324 aa4.52□□□□□ -1.69
PRPF38A-203ENST00000487160 FCAMRQ8WWV6 532 aa4.52□□□□□ -1.69
PRPF38A-203ENST00000487160 P2RX5Q93086 422 aa4.52□□□□□ -1.69
PRPF38A-203ENST00000487160 TMEM143Q96AN5 459 aa4.52□□□□□ -1.69
PRPF38A-203ENST00000487160 PYCR2Q96C36 320 aa4.52□□□□□ -1.69
PRPF38A-203ENST00000487160 PGM2Q96G03 612 aa4.52□□□□□ -1.69
PRPF38A-203ENST00000487160 HNRNPABQ99729 332 aaKnown RBP4.52□□□□□ -1.69
PRPF38A-203ENST00000487160 OR2B2Q9GZK3 357 aa4.52□□□□□ -1.69
PRPF38A-203ENST00000487160 TUFT1Q9NNX1 390 aa4.52□□□□□ -1.69
PRPF38A-203ENST00000487160 RAB9BQ9NP90 201 aa4.52□□□□□ -1.69
PRPF38A-203ENST00000487160 FAM207AQ9NSI2 230 aaPredicted RBP4.52□□□□□ -1.69
PRPF38A-203ENST00000487160 ABCB8Q9NUT2 735 aa4.52□□□□□ -1.69
PRPF38A-203ENST00000487160 P4HTMQ9NXG6 502 aa4.52□□□□□ -1.69
PRPF38A-203ENST00000487160 VPS18Q9P253 973 aa4.52□□□□□ -1.69
PRPF38A-203ENST00000487160 QSER1Q2KHR3 1735 aa4.52□□□□□ -1.69
PRPF38A-203ENST00000487160 RGPD5Q99666 1765 aa4.51□□□□□ -1.69
PRPF38A-203ENST00000487160 ZNF263O14978 683 aa4.51□□□□□ -1.69
PRPF38A-203ENST00000487160 ATP6V0E1O15342 81 aa4.51□□□□□ -1.69
PRPF38A-203ENST00000487160 FLRT2O43155 660 aa4.51□□□□□ -1.69
PRPF38A-203ENST00000487160 FGF17O60258 216 aa4.51□□□□□ -1.69
PRPF38A-203ENST00000487160 CIDEAO60543 219 aa4.51□□□□□ -1.69
PRPF38A-203ENST00000487160 KRT36O76013 467 aa4.51□□□□□ -1.69
PRPF38A-203ENST00000487160 IGHV4-31P0DP07 118 aa4.51□□□□□ -1.69
PRPF38A-203ENST00000487160 PAX1P15863 534 aa4.51□□□□□ -1.69
PRPF38A-203ENST00000487160 RPL36AP83881 106 aaKnown RBP4.51□□□□□ -1.69
PRPF38A-203ENST00000487160 RCN2Q14257 317 aa4.51□□□□□ -1.69
PRPF38A-203ENST00000487160 SQLEQ14534 574 aa4.51□□□□□ -1.69
PRPF38A-203ENST00000487160 RBBP5Q15291 538 aaKnown RBP4.51□□□□□ -1.69
PRPF38A-203ENST00000487160 GLRA4Q5JXX5 417 aa4.51□□□□□ -1.69
PRPF38A-203ENST00000487160 SLC10A5Q5PT55 438 aa4.51□□□□□ -1.69
PRPF38A-203ENST00000487160 FAM166AQ6J272 317 aa4.51□□□□□ -1.69
PRPF38A-203ENST00000487160 NHLRC1Q6VVB1 395 aa4.51□□□□□ -1.69
PRPF38A-203ENST00000487160 ANKRD33Q7Z3H0 272 aa4.51□□□□□ -1.69
PRPF38A-203ENST00000487160 PHLDB2Q86SQ0 1253 aa4.51□□□□□ -1.69
PRPF38A-203ENST00000487160 SMIM29Q86T20 159 aa4.51□□□□□ -1.69
PRPF38A-203ENST00000487160 ISCA2Q86U28 154 aa4.51□□□□□ -1.69
PRPF38A-203ENST00000487160 MSANTD4Q8NCY6 345 aa4.51□□□□□ -1.69
PRPF38A-203ENST00000487160 KBTBD8Q8NFY9 601 aa4.51□□□□□ -1.69
PRPF38A-203ENST00000487160 OR7G3Q8NG95 312 aa4.51□□□□□ -1.69
PRPF38A-203ENST00000487160 AFAP1L1Q8TED9 768 aa4.51□□□□□ -1.69
PRPF38A-203ENST00000487160 SGF29Q96ES7 293 aa4.51□□□□□ -1.69
PRPF38A-203ENST00000487160 PANK2Q9BZ23 570 aa4.51□□□□□ -1.69
PRPF38A-203ENST00000487160 SHARPINQ9H0F6 387 aa4.51□□□□□ -1.69
PRPF38A-203ENST00000487160 MTRRQ9UBK8 725 aa4.51□□□□□ -1.69
PRPF38A-203ENST00000487160 LEF1Q9UJU2 399 aaPredicted RBP4.51□□□□□ -1.69
PRPF38A-203ENST00000487160 KIAA1210Q9ULL0 1709 aa4.51□□□□□ -1.69
PRPF38A-203ENST00000487160 PAPPAQ13219 1627 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms