RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 ATP13A3Q9H7F0 1226 aa5.3□□□□□ -1.56
VPS50-212ENST00000476413 SDF2L1Q9HCN8 221 aa5.3□□□□□ -1.56
VPS50-212ENST00000476413 GPR173Q9NS66 373 aa5.3□□□□□ -1.56
VPS50-212ENST00000476413 DNAJC11Q9NVH1 559 aa5.3□□□□□ -1.56
VPS50-212ENST00000476413 GMEB2Q9UKD1 530 aa5.3□□□□□ -1.56
VPS50-212ENST00000476413 MAN1B1Q9UKM7 699 aa5.3□□□□□ -1.56
VPS50-212ENST00000476413 STX8Q9UNK0 236 aa5.3□□□□□ -1.56
VPS50-212ENST00000476413 KCNJ14Q9UNX9 436 aa5.3□□□□□ -1.56
VPS50-212ENST00000476413 AGTPBP1Q9UPW5 1226 aa5.3□□□□□ -1.56
VPS50-212ENST00000476413 PPP2R2CQ9Y2T4 447 aa5.3□□□□□ -1.56
VPS50-212ENST00000476413 PFASO15067 1338 aa5.29□□□□□ -1.56
VPS50-212ENST00000476413 RPGRIP1LQ68CZ1 1315 aa5.29□□□□□ -1.56
VPS50-212ENST00000476413 MSGN1A6NI15 193 aa5.29□□□□□ -1.56
VPS50-212ENST00000476413 SNURFLB1AK76 121 aa5.29□□□□□ -1.56
VPS50-212ENST00000476413 MT-ND3P03897 115 aa5.29□□□□□ -1.56
VPS50-212ENST00000476413 EDN1P05305 212 aa5.29□□□□□ -1.56
VPS50-212ENST00000476413 CD48P09326 243 aa5.29□□□□□ -1.56
VPS50-212ENST00000476413 GOT1P17174 413 aa5.29□□□□□ -1.56
VPS50-212ENST00000476413 SFTPDP35247 375 aa5.29□□□□□ -1.56
VPS50-212ENST00000476413 CDR2Q01850 454 aa5.29□□□□□ -1.56
VPS50-212ENST00000476413 AKAP17AQ02040 695 aaKnown RBP5.29□□□□□ -1.56
VPS50-212ENST00000476413 NPRL3Q12980 569 aa5.29□□□□□ -1.56
VPS50-212ENST00000476413 MEX3BQ6ZN04 569 aaKnown RBP5.29□□□□□ -1.56
VPS50-212ENST00000476413 G2E3Q7L622 706 aa5.29□□□□□ -1.56
VPS50-212ENST00000476413 C5orf24Q7Z6I8 188 aa5.29□□□□□ -1.56
VPS50-212ENST00000476413 PRUNE1Q86TP1 453 aa5.29□□□□□ -1.56
VPS50-212ENST00000476413 APLFQ8IW19 511 aaPredicted RBP5.29□□□□□ -1.56
VPS50-212ENST00000476413 MARVELD2Q8N4S9 558 aa5.29□□□□□ -1.56
VPS50-212ENST00000476413 LPCAT1Q8NF37 534 aa5.29□□□□□ -1.56
VPS50-212ENST00000476413 OR7A2PQ8NGA2 310 aa5.29□□□□□ -1.56
VPS50-212ENST00000476413 OR10V1Q8NGI7 309 aa5.29□□□□□ -1.56
VPS50-212ENST00000476413 AP2M1Q96CW1 435 aa5.29□□□□□ -1.56
VPS50-212ENST00000476413 PRMT1Q99873 361 aaKnown RBP5.29□□□□□ -1.56
VPS50-212ENST00000476413 SLC39A8Q9C0K1 460 aa5.29□□□□□ -1.56
VPS50-212ENST00000476413 EGLN3Q9H6Z9 239 aa5.29□□□□□ -1.56
VPS50-212ENST00000476413 C10orf88Q9H8K7 445 aa5.29□□□□□ -1.56
VPS50-212ENST00000476413 SLC52A3Q9NQ40 469 aa5.29□□□□□ -1.56
VPS50-212ENST00000476413 ZNF71Q9NQZ8 489 aaPredicted RBP5.29□□□□□ -1.56
VPS50-212ENST00000476413 TRPC4Q9UBN4 977 aa5.29□□□□□ -1.56
VPS50-212ENST00000476413 ABCC9O60706 1549 aa5.28□□□□□ -1.56
VPS50-212ENST00000476413 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.28□□□□□ -1.56
VPS50-212ENST00000476413 KRTAP29-1A8MX34 341 aaPredicted RBP5.28□□□□□ -1.56
VPS50-212ENST00000476413 VEGFDO43915 354 aa5.28□□□□□ -1.56
VPS50-212ENST00000476413 KRT33AO76009 404 aa5.28□□□□□ -1.56
VPS50-212ENST00000476413 PNPP00491 289 aa5.28□□□□□ -1.56
VPS50-212ENST00000476413 CTNNB1P35222 781 aa5.28□□□□□ -1.56
VPS50-212ENST00000476413 MAGEA11P43364 429 aa5.28□□□□□ -1.56
VPS50-212ENST00000476413 SERPINH1P50454 418 aaKnown RBP5.28□□□□□ -1.56
VPS50-212ENST00000476413 DNA2P51530 1060 aa5.28□□□□□ -1.56
VPS50-212ENST00000476413 CLDN17P56750 224 aa5.28□□□□□ -1.56
VPS50-212ENST00000476413 OR1D5P58170 312 aa5.28□□□□□ -1.56
VPS50-212ENST00000476413 TEFQ10587 303 aa5.28□□□□□ -1.56
VPS50-212ENST00000476413 FAM53AQ6NSI3 398 aaPredicted RBP5.28□□□□□ -1.56
VPS50-212ENST00000476413 CEACAM20Q6UY09 585 aa5.28□□□□□ -1.56
VPS50-212ENST00000476413 SIGLEC15Q6ZMC9 328 aa5.28□□□□□ -1.56
VPS50-212ENST00000476413 ASPGQ86U10 573 aa5.28□□□□□ -1.56
VPS50-212ENST00000476413 LRRC8CQ8TDW0 803 aa5.28□□□□□ -1.56
VPS50-212ENST00000476413 APOBEC4Q8WW27 367 aaKnown RBP5.28□□□□□ -1.56
VPS50-212ENST00000476413 DYRK2Q92630 601 aa5.28□□□□□ -1.56
VPS50-212ENST00000476413 GIMAP5Q96F15 307 aa5.28□□□□□ -1.56
VPS50-212ENST00000476413 BTBD9Q96Q07 612 aa5.28□□□□□ -1.56
VPS50-212ENST00000476413 NODALQ96S42 347 aa5.28□□□□□ -1.56
VPS50-212ENST00000476413 C17orf62Q9BQA9 187 aa5.28□□□□□ -1.56
VPS50-212ENST00000476413 FBXW2Q9UKT8 454 aa5.28□□□□□ -1.56
VPS50-212ENST00000476413 A0A087X0K7 114 aa5.27□□□□□ -1.57
VPS50-212ENST00000476413 ERVV-2B6SEH9 535 aa5.27□□□□□ -1.57
VPS50-212ENST00000476413 RAD51DO75771 328 aa5.27□□□□□ -1.57
VPS50-212ENST00000476413 PAK4O96013 591 aaPredicted RBP5.27□□□□□ -1.57
VPS50-212ENST00000476413 HLA-DPA1P20036 260 aa5.27□□□□□ -1.57
VPS50-212ENST00000476413 UCP2P55851 309 aa5.27□□□□□ -1.57
VPS50-212ENST00000476413 PHEXP78562 749 aa5.27□□□□□ -1.57
VPS50-212ENST00000476413 LCN1P1Q5VSP4 162 aa5.27□□□□□ -1.57
VPS50-212ENST00000476413 LRRC38Q5VT99 294 aa5.27□□□□□ -1.57
VPS50-212ENST00000476413 AGAP6Q5VW22 663 aa5.27□□□□□ -1.57
VPS50-212ENST00000476413 KCTD11Q693B1 232 aa5.27□□□□□ -1.57
VPS50-212ENST00000476413 TATDN1Q6P1N9 297 aa5.27□□□□□ -1.57
VPS50-212ENST00000476413 SLC25A47Q6Q0C1 308 aa5.27□□□□□ -1.57
VPS50-212ENST00000476413 LEKR1Q6ZMV7 388 aa5.27□□□□□ -1.57
VPS50-212ENST00000476413 C18orf65Q6ZTR6 163 aa5.27□□□□□ -1.57
VPS50-212ENST00000476413 SH2D5Q6ZV89 423 aa5.27□□□□□ -1.57
VPS50-212ENST00000476413 PRSS35Q8N3Z0 413 aa5.27□□□□□ -1.57
VPS50-212ENST00000476413 SLC37A3Q8NCC5 494 aa5.27□□□□□ -1.57
VPS50-212ENST00000476413 METTL21AQ8WXB1 218 aa5.27□□□□□ -1.57
VPS50-212ENST00000476413 CDKN2AIPNLQ96HQ2 116 aa5.27□□□□□ -1.57
VPS50-212ENST00000476413 UHRF2Q96PU4 802 aa5.27□□□□□ -1.57
VPS50-212ENST00000476413 CYP39A1Q9NYL5 469 aa5.27□□□□□ -1.57
VPS50-212ENST00000476413 ZNF580Q9UK33 172 aa5.27□□□□□ -1.57
VPS50-212ENST00000476413 APPL1Q9UKG1 709 aa5.27□□□□□ -1.57
VPS50-212ENST00000476413 PILRBQ9UKJ0 227 aa5.27□□□□□ -1.57
VPS50-212ENST00000476413 STK36Q9NRP7 1315 aa5.26□□□□□ -1.57
VPS50-212ENST00000476413 SPATA31D1Q6ZQQ2 1576 aa5.26□□□□□ -1.57
VPS50-212ENST00000476413 PMS2P5A8MQ11 134 aa5.26□□□□□ -1.57
VPS50-212ENST00000476413 E5RGE8 158 aa5.26□□□□□ -1.57
VPS50-212ENST00000476413 KLF11O14901 512 aa5.26□□□□□ -1.57
VPS50-212ENST00000476413 SCO2O43819 266 aa5.26□□□□□ -1.57
VPS50-212ENST00000476413 KHDRBS3O75525 346 aaKnown RBP5.26□□□□□ -1.57
VPS50-212ENST00000476413 TRMUO75648 421 aaKnown RBP5.26□□□□□ -1.57
VPS50-212ENST00000476413 PRSS1P07477 247 aa5.26□□□□□ -1.57
VPS50-212ENST00000476413 UMODP07911 640 aa5.26□□□□□ -1.57
VPS50-212ENST00000476413 YES1P07947 543 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms