RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 CACNB4O00305 520 aaPredicted RBP5.92□□□□□ -1.46
HERC4-209ENST00000473533 PCDHGA12O60330 932 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 PTPN6P29350 595 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 GRK4P32298 578 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 LIPAP38571 399 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 AFF1P51825 1210 aaKnown RBP5.92□□□□□ -1.46
HERC4-209ENST00000473533 SMIM11AP58511 58 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 SELENOWP63302 87 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 PPIGQ13427 754 aaKnown RBP eCLIP5.92□□□□□ -1.465e-8■□□□□ 9.7
HERC4-209ENST00000473533 IQCCQ4KMZ1 466 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 CATSPEREQ5SY80 951 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 CPTPQ5TA50 214 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 MFSD14CQ5VZR4 134 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 OR4F3Q6IEY1 312 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 GDF6Q6KF10 455 aaPredicted RBP5.92□□□□□ -1.46
HERC4-209ENST00000473533 UBQLNLQ8IYU4 475 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 OR8H2Q8N162 312 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 OXR1Q8N573 874 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 NATD1Q8N6N6 113 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 DCAF4L2Q8NA75 395 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 SPPL2AQ8TCT8 520 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 GGHQ92820 318 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 COPS8Q99627 209 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 CDADC1Q9BWV3 514 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 EMILIN2Q9BXX0 1053 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 TPT1P8Q9HAU6 139 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 VNN3Q9NY84 501 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 VPS29Q9UBQ0 182 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 SNX7Q9UNH6 387 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 ANGPT4Q9Y264 503 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 PCDHB9Q9Y5E1 797 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 GREB1Q4ZG55 1949 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 CHD5Q8TDI0 1954 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 CPSF4O95639 269 aaKnown RBP5.92□□□□□ -1.46
HERC4-209ENST00000473533 IGSF6O95976 241 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 MYCP01106 439 aaPredicted RBP5.92□□□□□ -1.46
HERC4-209ENST00000473533 ADORA3P0DMS8 318 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 PSMA1P25786 263 aaKnown RBP5.92□□□□□ -1.46
HERC4-209ENST00000473533 SERPINA4P29622 427 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 RGRP47804 291 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 VLDLRP98155 873 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 MRPL58Q14197 206 aaKnown RBP5.92□□□□□ -1.46
HERC4-209ENST00000473533 IRF3Q14653 427 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 MICAQ29983 383 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 ZNF630Q2M218 657 aaPredicted RBP5.92□□□□□ -1.46
HERC4-209ENST00000473533 GCNT6Q5T4J0 391 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 RNLSQ5VYX0 342 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 PDE12Q6L8Q7 609 aaKnown RBP5.92□□□□□ -1.46
HERC4-209ENST00000473533 FAM151BQ6UXP7 276 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 TMPRSS11AQ6ZMR5 421 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 PEX5LQ8IYB4 626 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 CFAP52Q8N1V2 620 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 CLHC1Q8NHS4 586 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 DNASE1L2Q92874 299 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 CLP1Q92989 425 aaKnown RBP5.92□□□□□ -1.46
HERC4-209ENST00000473533 APOLD1Q96LR9 279 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 INPP5KQ9BT40 448 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 TRAF4Q9BUZ4 470 aaPredicted RBP5.92□□□□□ -1.46
HERC4-209ENST00000473533 BHLHE41Q9C0J9 482 aaPredicted RBP5.92□□□□□ -1.46
HERC4-209ENST00000473533 SMURF1Q9HCE7 757 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 TRMT13Q9NUP7 481 aaKnown RBP5.92□□□□□ -1.46
HERC4-209ENST00000473533 TRPM5Q9NZQ8 1165 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 RNF181Q9P0P0 153 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 POU2F3Q9UKI9 436 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 HCN4Q9Y3Q4 1203 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 TRIP12Q14669 1992 aaPredicted RBP5.91□□□□□ -1.46
HERC4-209ENST00000473533 MTMR11A4FU01 709 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 CCDC182A6NF36 153 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 MGAT4DA6NG13 374 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 H3BNC9 293 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 M0R082 166 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 RNASET2O00584 256 aaKnown RBP5.91□□□□□ -1.46
HERC4-209ENST00000473533 SCAMP2O15127 329 aaKnown RBP5.91□□□□□ -1.46
HERC4-209ENST00000473533 HOXA2O43364 376 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 CCNB2O95067 398 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 KCNK2O95069 426 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 TBX18O95935 607 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 TRBC1P01850 177 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 IDH2P48735 452 aaKnown RBP5.91□□□□□ -1.46
HERC4-209ENST00000473533 NKX3-2P78367 333 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 SPIBQ01892 262 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 IRF8Q02556 426 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 ST3GAL4Q11206 333 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 PPP1R8Q12972 351 aaKnown RBP5.91□□□□□ -1.46
HERC4-209ENST00000473533 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.91□□□□□ -1.46
HERC4-209ENST00000473533 FAM171A1Q5VUB5 890 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 SDHAF4Q5VUM1 108 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 NPAS3Q8IXF0 933 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 TAGAPQ8N103 731 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 LINC00471Q8N535 108 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 GDPD1Q8N9F7 314 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 IL17RCQ8NAC3 791 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 FAM46DQ8NEK8 389 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 TRPV1Q8NER1 839 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 IL17RDQ8NFM7 739 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 APH1BQ8WW43 257 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 RPL3LQ92901 407 aaKnown RBP5.91□□□□□ -1.46
HERC4-209ENST00000473533 PPP1R16AQ96I34 528 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 EXOC2Q96KP1 924 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 TEFMQ96QE5 360 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms