RNA–Protein interactions for RNA: ENST00000360453.8

PPARGC1B-202, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPARGC1B, Length 3,004 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-202ENST00000360453 DMRTB1Q96MA1 342 aa13□□□□□ -0.33
PPARGC1B-202ENST00000360453 SAMD11Q96NU1 681 aa13□□□□□ -0.33
PPARGC1B-202ENST00000360453 FRG2BQ96QU4 278 aa13□□□□□ -0.33
PPARGC1B-202ENST00000360453 TRIM39Q9HCM9 518 aa13□□□□□ -0.33
PPARGC1B-202ENST00000360453 AGAP5A6NIR3 686 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 E7EQ34 232 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 H3BM21 787 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 RFXAPO00287 272 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 SEPT4O43236 478 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 HIST1H2AGP0C0S8 130 aaPredicted RBP12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 HMGA1P17096 107 aaKnown RBP12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 GJA1P17302 382 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 HIST1H2ADP20671 130 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 CD9P21926 228 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 FEN1P39748 380 aaKnown RBP12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 TRPC1P48995 793 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 COPZ1P61923 177 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 IRF8Q02556 426 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 PROX2Q3B8N5 592 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 PLEKHG6Q3KR16 790 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 LRIT3Q3SXY7 679 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 ARMCX4Q5H9R4 360 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 DGKKQ5KSL6 1271 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 MFSD14CQ5VZR4 134 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 CCBE1Q6UXH8 406 aaPredicted RBP12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 TMCO2Q7Z6W1 182 aaPredicted RBP12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 UBE2J2Q8N2K1 259 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 METTL4Q8N3J2 472 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 TCAIMQ8N3R3 496 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 STX19Q8N4C7 294 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 ZNF675Q8TD23 568 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 HIST1H2AHQ96KK5 128 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 HIST1H2AJQ99878 128 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 H2AFJQ9BTM1 129 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 SMG9Q9H0W8 520 aaKnown RBP12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 EXOSC4Q9NPD3 245 aaKnown RBP12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 TRPM5Q9NZQ8 1165 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 MAN2B2Q9Y2E5 1009 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 METTL15A6NJ78 407 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 RGS5O15539 181 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 RFPL2O75678 378 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 KCNJ10P78508 379 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 ST3GAL4Q11206 333 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 CRTC1Q6UUV9 634 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 VANGL1Q8TAA9 524 aaPredicted RBP12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 SPATA17Q96L03 361 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 TPK1Q9H3S4 243 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 TMEM45AQ9NWC5 275 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 PCDHB7Q9Y5E2 793 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 PNMA8CA0A1B0GUJ8 204 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 PABPN1LA6NDY0 278 aaKnown RBP12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 GABRR3A8MPY1 467 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 TNFRSF11BO00300 401 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 SUV39H1O43463 412 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 SCN2BO60939 215 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 EOMESO95936 686 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 C9P02748 559 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 LHCGRP22888 699 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 SPAM1P38567 509 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 MC1RQ01726 317 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 SPIBQ01892 262 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 SMARCB1Q12824 385 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 COL9A2Q14055 689 aaPredicted RBP12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 UBE2UQ5VVX9 321 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 KIAA1841Q6NSI8 718 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 SLC44A2Q8IWA5 706 aaPredicted RBP12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 CYP4Z2PQ8N1L4 340 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 C1orf52Q8N6N3 182 aaKnown RBP12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 C7orf34Q96L11 122 aa12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 TP63Q9H3D4 680 aaPredicted RBP12.99□□□□□ -0.33
PPARGC1B-202ENST00000360453 GNG14A0A1W2PPG7 69 aa12.98□□□□□ -0.33
PPARGC1B-202ENST00000360453 GCM2O75603 506 aaPredicted RBP12.98□□□□□ -0.33
PPARGC1B-202ENST00000360453 IGFBP1P08833 259 aaPredicted RBP12.98□□□□□ -0.33
PPARGC1B-202ENST00000360453 HLA-EP13747 358 aa12.98□□□□□ -0.33
PPARGC1B-202ENST00000360453 CD70P32970 193 aa12.98□□□□□ -0.33
PPARGC1B-202ENST00000360453 TCTN1Q2MV58 587 aa12.98□□□□□ -0.33
PPARGC1B-202ENST00000360453 TTLL9Q3SXZ7 439 aa12.98□□□□□ -0.33
PPARGC1B-202ENST00000360453 CBLL1Q75N03 491 aa12.98□□□□□ -0.33
PPARGC1B-202ENST00000360453 EIF3MQ7L2H7 374 aaKnown RBP12.98□□□□□ -0.33
PPARGC1B-202ENST00000360453 GDPD3Q7L5L3 318 aa12.98□□□□□ -0.33
PPARGC1B-202ENST00000360453 BCDIN3DQ7Z5W3 292 aaKnown RBP12.98□□□□□ -0.33
PPARGC1B-202ENST00000360453 SOCS4Q8WXH5 440 aa12.98□□□□□ -0.33
PPARGC1B-202ENST00000360453 UPF1Q92900 1129 aaKnown RBP eCLIP12.98□□□□□ -0.33
PPARGC1B-202ENST00000360453 IL4I1Q96RQ9 567 aa12.98□□□□□ -0.33
PPARGC1B-202ENST00000360453 TSEN34Q9BSV6 310 aaKnown RBP12.98□□□□□ -0.33
PPARGC1B-202ENST00000360453 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.98□□□□□ -0.333e-6■■■■□ 23.5
PPARGC1B-202ENST00000360453 MS4A12Q9NXJ0 267 aa12.98□□□□□ -0.33
PPARGC1B-202ENST00000360453 RPS6KA6Q9UK32 745 aa12.98□□□□□ -0.33
PPARGC1B-202ENST00000360453 KCNE1BA0A087WTH5 132 aa12.98□□□□□ -0.33
PPARGC1B-202ENST00000360453 PRAMEF25A6NGN4 478 aa12.98□□□□□ -0.33
PPARGC1B-202ENST00000360453 TFECO14948 347 aaPredicted RBP12.98□□□□□ -0.33
PPARGC1B-202ENST00000360453 GALTP07902 379 aa12.98□□□□□ -0.33
PPARGC1B-202ENST00000360453 ADORA3P0DMS8 318 aa12.98□□□□□ -0.33
PPARGC1B-202ENST00000360453 PRPS2P11908 318 aa12.98□□□□□ -0.33
PPARGC1B-202ENST00000360453 CKMT1AP12532 417 aa12.98□□□□□ -0.33
PPARGC1B-202ENST00000360453 PSMA3P25788 255 aa12.98□□□□□ -0.33
PPARGC1B-202ENST00000360453 PBLDP30039 288 aaPredicted RBP12.98□□□□□ -0.33
PPARGC1B-202ENST00000360453 BMPR1AP36894 532 aa12.98□□□□□ -0.33
PPARGC1B-202ENST00000360453 PREPP48147 710 aa12.98□□□□□ -0.33
PPARGC1B-202ENST00000360453 IFITM2Q01629 132 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms