RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 FEVQ99581 238 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 CCM2Q9BSQ5 444 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 ASPNQ9BXN1 380 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 FAM126AQ9BYI3 521 aaPredicted RBP9.35□□□□□ -0.91
HOXA1-201ENST00000343060 RACGAP1Q9H0H5 632 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 RUBCNLQ9H714 662 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 ELP3Q9H9T3 547 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 ATP13A2Q9NQ11 1180 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 FAM105AQ9NUU6 356 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 TMEM184CQ9NVA4 438 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 WWOXQ9NZC7 414 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 DNMT3LQ9UJW3 386 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 KLHL20Q9Y2M5 609 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 LSM2Q9Y333 95 aaKnown RBP9.35□□□□□ -0.91
HOXA1-201ENST00000343060 SNX8Q9Y5X2 465 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 TTC3P53804 2025 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 KCNE1BA0A087WTH5 132 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 ARL5CA6NH57 179 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 ZSCAN5BA6NJL1 495 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 ADAMDEC1O15204 470 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 INSIG1O15503 277 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 SCN2BO60939 215 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 C1QCP02747 245 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 SCG5P05408 212 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 UBL4AP11441 157 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 CTPS1P17812 591 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 MYL9P24844 172 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 TACR1P25103 407 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 ITGB7P26010 798 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 MAPK1P28482 360 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 RGRP47804 291 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 AP2S1P53680 142 aaPredicted RBP9.34□□□□□ -0.91
HOXA1-201ENST00000343060 WNT3P56703 355 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 NKX3-2P78367 333 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 RHAGQ02094 409 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 PPIGQ13427 754 aaKnown RBP eCLIP9.34□□□□□ -0.91
HOXA1-201ENST00000343060 ZRANB3Q5FWF4 1079 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 SLC35F1Q5T1Q4 408 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 ZNF767PQ75MW2 155 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 NLRP8Q86W28 1048 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 SPATA2LQ8IUW3 424 aaPredicted RBP9.34□□□□□ -0.91
HOXA1-201ENST00000343060 LAX1Q8IWV1 398 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 IQCF2Q8IXL9 164 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 C1orf52Q8N6N3 182 aaKnown RBP9.34□□□□□ -0.91
HOXA1-201ENST00000343060 OR10G2Q8NGC3 310 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 KIAA1143Q96AT1 154 aaPredicted RBP9.34□□□□□ -0.91
HOXA1-201ENST00000343060 CMTM7Q96FZ5 175 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 MCOLN1Q9GZU1 580 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 MMP28Q9H239 520 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 RNF121Q9H920 327 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 RDH14Q9HBH5 336 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 HHATLQ9HCP6 504 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 GIMAP4Q9NUV9 329 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 TAS2R16Q9NYV7 291 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 ALPK3Q96L96 1907 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 SERTM1A2A2V5 107 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 CCDC182A6NF36 153 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 B8ZZF3 427 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 ADM5C9JUS6 153 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 ZNF670-ZNF695F2Z2N8 137 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 STX7O15400 261 aaKnown RBP9.34□□□□□ -0.91
HOXA1-201ENST00000343060 TREHO43280 583 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 PRMT3O60678 531 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 LGI1O95970 557 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 HSMCR30P0CW71 290 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 OR1E1P30953 314 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 PCGF2P35227 344 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 RPS19P39019 145 aaKnown RBP9.34□□□□□ -0.91
HOXA1-201ENST00000343060 KIR3DL1P43629 444 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 BRCC3P46736 316 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 KCNQ1P51787 676 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 C21orf58P58505 322 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 SGO1Q5FBB7 561 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 TRAF7Q6Q0C0 670 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 SLC5A8Q8N695 610 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 OR5H6Q8NGV6 325 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 PPP1R13LQ8WUF5 828 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 MSLNLQ96KJ4 702 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 FRMD6Q96NE9 622 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 RPRD1AQ96P16 312 aaPredicted RBP9.34□□□□□ -0.91
HOXA1-201ENST00000343060 TSSK3Q96PN8 268 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 SMIM14Q96QK8 99 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 TSEN34Q9BSV6 310 aaKnown RBP9.34□□□□□ -0.91
HOXA1-201ENST00000343060 C11orf54Q9H0W9 315 aaPredicted RBP9.34□□□□□ -0.91
HOXA1-201ENST00000343060 ABCB8Q9NUT2 735 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 MS4A12Q9NXJ0 267 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 NDUFAF4Q9P032 175 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 KCNN3Q9UGI6 736 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 CMAHPQ9Y471 501 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 ZNF451Q9Y4E5 1061 aa9.34□□□□□ -0.91
HOXA1-201ENST00000343060 TNFRSF11BO00300 401 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 FPGTO14772 594 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 TLR5O60602 858 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 GUCA1CO95843 209 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 PDYNP01213 254 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 IGHA2P01877 340 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 C1QBP02746 253 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 EPB42P16452 691 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 EPORP19235 508 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 GDF5P43026 501 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms