RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 TNFRSF11BO00300 401 aa22.82■■□□□ 1.24
TSKU-201ENST00000333090 SYN3O14994 580 aa22.82■■□□□ 1.24
TSKU-201ENST00000333090 SCN2BO60939 215 aa22.82■■□□□ 1.24
TSKU-201ENST00000333090 TNFRSF1BP20333 461 aa22.82■■□□□ 1.24
TSKU-201ENST00000333090 CCND3P30281 292 aaPredicted RBP22.82■■□□□ 1.24
TSKU-201ENST00000333090 C10orf62Q5T681 223 aaPredicted RBP22.82■■□□□ 1.24
TSKU-201ENST00000333090 GATAD2AQ86YP4 633 aa22.82■■□□□ 1.24
TSKU-201ENST00000333090 IFNL1Q8IU54 200 aa22.82■■□□□ 1.24
TSKU-201ENST00000333090 PIH1D2Q8WWB5 315 aa22.82■■□□□ 1.24
TSKU-201ENST00000333090 HCSTQ9UBK5 93 aa22.82■■□□□ 1.24
TSKU-201ENST00000333090 N6AMT1Q9Y5N5 214 aa22.82■■□□□ 1.24
TSKU-201ENST00000333090 LYVE1Q9Y5Y7 322 aa22.82■■□□□ 1.24
TSKU-201ENST00000333090 GLYATL1P3A0A0U1RQE8 302 aa22.81■■□□□ 1.24
TSKU-201ENST00000333090 TMEM189-UBE2V1I3L0A0 370 aa22.81■■□□□ 1.24
TSKU-201ENST00000333090 CTDSP2O14595 271 aa22.81■■□□□ 1.24
TSKU-201ENST00000333090 SOX6P35712 828 aa22.81■■□□□ 1.24
TSKU-201ENST00000333090 ABRQ12979 859 aa22.81■■□□□ 1.24
TSKU-201ENST00000333090 MACC1Q6ZN28 852 aa22.81■■□□□ 1.24
TSKU-201ENST00000333090 CSGALNACT1Q8TDX6 532 aa22.81■■□□□ 1.24
TSKU-201ENST00000333090 SPATA17Q96L03 361 aa22.81■■□□□ 1.24
TSKU-201ENST00000333090 CEP19Q96LK0 163 aa22.81■■□□□ 1.24
TSKU-201ENST00000333090 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.81■■□□□ 1.24
TSKU-201ENST00000333090 FKBP14Q9NWM8 211 aa22.81■■□□□ 1.24
TSKU-201ENST00000333090 ADPRHL2Q9NX46 363 aa22.81■■□□□ 1.24
TSKU-201ENST00000333090 FZD4Q9ULV1 537 aa22.81■■□□□ 1.24
TSKU-201ENST00000333090 ANKRD34BA5PLL1 514 aa22.81■■□□□ 1.24
TSKU-201ENST00000333090 SLC38A8A6NNN8 435 aa22.81■■□□□ 1.24
TSKU-201ENST00000333090 LOC110117498-PIK3R3F6TDL0 507 aa22.81■■□□□ 1.24
TSKU-201ENST00000333090 YY2O15391 372 aa22.81■■□□□ 1.24
TSKU-201ENST00000333090 KIAA0513O60268 411 aa22.81■■□□□ 1.24
TSKU-201ENST00000333090 AOC2O75106 756 aa22.81■■□□□ 1.24
TSKU-201ENST00000333090 CYBAP13498 195 aa22.81■■□□□ 1.24
TSKU-201ENST00000333090 ELNP15502 786 aa22.81■■□□□ 1.24
TSKU-201ENST00000333090 SRSF11Q05519 484 aaKnown RBP22.81■■□□□ 1.24
TSKU-201ENST00000333090 PTCHD3Q3KNS1 767 aa22.81■■□□□ 1.24
TSKU-201ENST00000333090 VASH1Q7L8A9 365 aaPredicted RBP22.81■■□□□ 1.24
TSKU-201ENST00000333090 SYNPOQ8N3V7 929 aa22.81■■□□□ 1.24
TSKU-201ENST00000333090 LILRB4Q8NHJ6 448 aa22.81■■□□□ 1.24
TSKU-201ENST00000333090 VWA8A3KMH1 1905 aa22.81■■□□□ 1.24
TSKU-201ENST00000333090 OR6C75A6NL08 312 aa22.81■■□□□ 1.24
TSKU-201ENST00000333090 K7ERQ8 282 aa22.81■■□□□ 1.24
TSKU-201ENST00000333090 BPIP17213 487 aa22.81■■□□□ 1.24
TSKU-201ENST00000333090 ITPKAP23677 461 aa22.81■■□□□ 1.24
TSKU-201ENST00000333090 SLC15A1P46059 708 aa22.81■■□□□ 1.24
TSKU-201ENST00000333090 PPIGQ13427 754 aaKnown RBP eCLIP22.81■■□□□ 1.24
TSKU-201ENST00000333090 VEZF1Q14119 521 aa22.81■■□□□ 1.24
TSKU-201ENST00000333090 SF1Q15637 639 aaKnown RBP22.81■■□□□ 1.24
TSKU-201ENST00000333090 MLIPQ5VWP3 458 aa22.81■■□□□ 1.24
TSKU-201ENST00000333090 SLX4IPQ5VYV7 408 aa22.81■■□□□ 1.24
TSKU-201ENST00000333090 FRG2Q64ET8 278 aa22.81■■□□□ 1.24
TSKU-201ENST00000333090 UBE2R2Q712K3 238 aaPredicted RBP22.81■■□□□ 1.24
TSKU-201ENST00000333090 RTN4RL1Q86UN2 441 aaPredicted RBP22.81■■□□□ 1.24
TSKU-201ENST00000333090 OR10G2Q8NGC3 310 aa22.81■■□□□ 1.24
TSKU-201ENST00000333090 OR6F1Q8NGZ6 308 aa22.81■■□□□ 1.24
TSKU-201ENST00000333090 TP53INP1Q96A56 240 aa22.81■■□□□ 1.24
TSKU-201ENST00000333090 SH3KBP1Q96B97 665 aa22.81■■□□□ 1.24
TSKU-201ENST00000333090 FRG2BQ96QU4 278 aa22.81■■□□□ 1.24
TSKU-201ENST00000333090 HTATIP2Q9BUP3 242 aa22.81■■□□□ 1.24
TSKU-201ENST00000333090 WBP11Q9Y2W2 641 aaKnown RBP22.81■■□□□ 1.24
TSKU-201ENST00000333090 OPN1SWP03999 348 aa22.8■■□□□ 1.24
TSKU-201ENST00000333090 LAMP1P11279 417 aa22.8■■□□□ 1.24
TSKU-201ENST00000333090 GKP32189 559 aa22.8■■□□□ 1.24
TSKU-201ENST00000333090 FLT3LGP49771 235 aa22.8■■□□□ 1.24
TSKU-201ENST00000333090 SEMG2Q02383 582 aa22.8■■□□□ 1.24
TSKU-201ENST00000333090 CSTF3Q12996 717 aaKnown RBP22.8■■□□□ 1.24
TSKU-201ENST00000333090 ATAD3CQ5T2N8 411 aa22.8■■□□□ 1.24
TSKU-201ENST00000333090 OR8H2Q8N162 312 aa22.8■■□□□ 1.24
TSKU-201ENST00000333090 CHAC2Q8WUX2 184 aa22.8■■□□□ 1.24
TSKU-201ENST00000333090 SDHCQ99643 169 aaPredicted RBP22.8■■□□□ 1.24
TSKU-201ENST00000333090 RETREG1Q9H6L5 497 aa22.8■■□□□ 1.24
TSKU-201ENST00000333090 NMRK2Q9NPI5 230 aa22.8■■□□□ 1.24
TSKU-201ENST00000333090 ZNF226Q9NYT6 803 aa22.8■■□□□ 1.24
TSKU-201ENST00000333090 SLC22A14Q9Y267 594 aa22.8■■□□□ 1.24
TSKU-201ENST00000333090 INPPL1O15357 1258 aa22.8■■□□□ 1.24
TSKU-201ENST00000333090 ATF6P18850 670 aa22.8■■□□□ 1.24
TSKU-201ENST00000333090 PRPH2P23942 346 aa22.8■■□□□ 1.24
TSKU-201ENST00000333090 FOXD4Q12950 439 aaPredicted RBP22.8■■□□□ 1.24
TSKU-201ENST00000333090 BOP1Q14137 746 aaKnown RBP22.8■■□□□ 1.24
TSKU-201ENST00000333090 MED22Q15528 200 aa22.8■■□□□ 1.24
TSKU-201ENST00000333090 BCL7AQ4VC05 210 aa22.8■■□□□ 1.24
TSKU-201ENST00000333090 NXNL2Q5VZ03 156 aa22.8■■□□□ 1.24
TSKU-201ENST00000333090 CHST9Q7L1S5 443 aa22.8■■□□□ 1.24
TSKU-201ENST00000333090 OR2B2Q9GZK3 357 aa22.8■■□□□ 1.24
TSKU-201ENST00000333090 IMPAD1Q9NX62 359 aa22.8■■□□□ 1.24
TSKU-201ENST00000333090 COCHO43405 550 aa22.79■■□□□ 1.24
TSKU-201ENST00000333090 PRAMEF4O60810 478 aa22.79■■□□□ 1.24
TSKU-201ENST00000333090 STC2O76061 302 aa22.79■■□□□ 1.24
TSKU-201ENST00000333090 IGHA2P01877 340 aa22.79■■□□□ 1.24
TSKU-201ENST00000333090 HTR3AP46098 478 aa22.79■■□□□ 1.24
TSKU-201ENST00000333090 DMC1Q14565 340 aa22.79■■□□□ 1.24
TSKU-201ENST00000333090 GGTA1PQ4G0N0 100 aa22.79■■□□□ 1.24
TSKU-201ENST00000333090 PRAMEF9Q5VWM5 478 aa22.79■■□□□ 1.24
TSKU-201ENST00000333090 ZNF544Q6NX49 715 aa22.79■■□□□ 1.24
TSKU-201ENST00000333090 LRRC70Q7Z2Q7 622 aa22.79■■□□□ 1.24
TSKU-201ENST00000333090 GPR155Q7Z3F1 870 aa22.79■■□□□ 1.24
TSKU-201ENST00000333090 CCDC190Q86UF4 302 aa22.79■■□□□ 1.24
TSKU-201ENST00000333090 NIPSNAP1Q9BPW8 284 aa22.79■■□□□ 1.24
TSKU-201ENST00000333090 CCM2Q9BSQ5 444 aa22.79■■□□□ 1.24
TSKU-201ENST00000333090 KCTD5Q9NXV2 234 aa22.79■■□□□ 1.24
TSKU-201ENST00000333090 BTBD3Q9Y2F9 522 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms