RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 SLC28A1O00337 649 aa23.54■■□□□ 1.36
SOX1-201ENST00000330949 NDUFS3O75489 264 aa23.54■■□□□ 1.36
SOX1-201ENST00000330949 SLC10A7Q0GE19 358 aa23.54■■□□□ 1.36
SOX1-201ENST00000330949 GTF2H2Q13888 395 aa23.54■■□□□ 1.36
SOX1-201ENST00000330949 IHHQ14623 411 aa23.54■■□□□ 1.36
SOX1-201ENST00000330949 PCBP2Q15366 365 aaKnown RBP eCLIP23.54■■□□□ 1.36
SOX1-201ENST00000330949 ZNF792Q3KQV3 632 aa23.54■■□□□ 1.36
SOX1-201ENST00000330949 GTF2H2CQ6P1K8 395 aa23.54■■□□□ 1.36
SOX1-201ENST00000330949 EIF3MQ7L2H7 374 aaKnown RBP23.54■■□□□ 1.36
SOX1-201ENST00000330949 MILR1Q7Z6M3 343 aa23.54■■□□□ 1.36
SOX1-201ENST00000330949 GPR152Q8TDT2 470 aa23.54■■□□□ 1.36
SOX1-201ENST00000330949 FCRL2Q96LA5 508 aaPredicted RBP23.54■■□□□ 1.36
SOX1-201ENST00000330949 MRPL9Q9BYD2 267 aaKnown RBP23.54■■□□□ 1.36
SOX1-201ENST00000330949 IMPAD1Q9NX62 359 aa23.54■■□□□ 1.36
SOX1-201ENST00000330949 MS4A12Q9NXJ0 267 aa23.54■■□□□ 1.36
SOX1-201ENST00000330949 ASIC5Q9NY37 505 aa23.54■■□□□ 1.36
SOX1-201ENST00000330949 ZNF226Q9NYT6 803 aa23.54■■□□□ 1.36
SOX1-201ENST00000330949 GABRQQ9UN88 632 aa23.54■■□□□ 1.36
SOX1-201ENST00000330949 PCDHGB3Q9Y5G1 929 aa23.54■■□□□ 1.36
SOX1-201ENST00000330949 PLA2G10O15496 165 aa23.53■■□□□ 1.36
SOX1-201ENST00000330949 GABRB1P18505 474 aa23.53■■□□□ 1.36
SOX1-201ENST00000330949 TNNI3P19429 210 aa23.53■■□□□ 1.36
SOX1-201ENST00000330949 KDELR2P33947 212 aa23.53■■□□□ 1.36
SOX1-201ENST00000330949 LCN1P1Q5VSP4 162 aa23.53■■□□□ 1.36
SOX1-201ENST00000330949 DOK6Q6PKX4 331 aa23.53■■□□□ 1.36
SOX1-201ENST00000330949 LINGO1Q96FE5 620 aa23.53■■□□□ 1.36
SOX1-201ENST00000330949 CRTAC1Q9NQ79 661 aa23.53■■□□□ 1.36
SOX1-201ENST00000330949 RNF181Q9P0P0 153 aa23.53■■□□□ 1.36
SOX1-201ENST00000330949 BTN3A3O00478 584 aa23.53■■□□□ 1.36
SOX1-201ENST00000330949 TREHO43280 583 aa23.53■■□□□ 1.36
SOX1-201ENST00000330949 TNFRSF21O75509 655 aa23.53■■□□□ 1.36
SOX1-201ENST00000330949 SMIM10L2AP0DMW4 78 aa23.53■■□□□ 1.36
SOX1-201ENST00000330949 SMIM10L2BP0DMW5 78 aa23.53■■□□□ 1.36
SOX1-201ENST00000330949 S100A3P33764 101 aa23.53■■□□□ 1.36
SOX1-201ENST00000330949 TRIM69Q86WT6 500 aa23.53■■□□□ 1.36
SOX1-201ENST00000330949 UBE2J2Q8N2K1 259 aa23.53■■□□□ 1.36
SOX1-201ENST00000330949 KIAA1143Q96AT1 154 aaPredicted RBP23.53■■□□□ 1.36
SOX1-201ENST00000330949 ZMYM5Q9UJ78 669 aa23.53■■□□□ 1.36
SOX1-201ENST00000330949 H3BM21 787 aa23.52■■□□□ 1.36
SOX1-201ENST00000330949 PRSS56P0CW18 603 aa23.52■■□□□ 1.36
SOX1-201ENST00000330949 MGAT3Q09327 533 aa23.52■■□□□ 1.36
SOX1-201ENST00000330949 GPR162Q16538 588 aa23.52■■□□□ 1.36
SOX1-201ENST00000330949 CBLL1Q75N03 491 aa23.52■■□□□ 1.36
SOX1-201ENST00000330949 CDH24Q86UP0 819 aa23.52■■□□□ 1.36
SOX1-201ENST00000330949 VANGL1Q8TAA9 524 aaPredicted RBP23.52■■□□□ 1.36
SOX1-201ENST00000330949 TRMT61AQ96FX7 289 aaKnown RBP23.52■■□□□ 1.36
SOX1-201ENST00000330949 ZC3HAV1LQ96H79 300 aaKnown RBP23.52■■□□□ 1.36
SOX1-201ENST00000330949 DIRAS2Q96HU8 199 aa23.52■■□□□ 1.36
SOX1-201ENST00000330949 KLHL5Q96PQ7 755 aa23.52■■□□□ 1.36
SOX1-201ENST00000330949 CNOT2Q9NZN8 540 aaKnown RBP23.52■■□□□ 1.36
SOX1-201ENST00000330949 RIMKLBQ9ULI2 386 aa23.52■■□□□ 1.36
SOX1-201ENST00000330949 MYBPHLA2RUH7 354 aa23.52■■□□□ 1.36
SOX1-201ENST00000330949 PRR23AA6NEV1 266 aa23.52■■□□□ 1.36
SOX1-201ENST00000330949 ZNF670-ZNF695F2Z2N8 137 aa23.52■■□□□ 1.36
SOX1-201ENST00000330949 HAS3O00219 553 aa23.52■■□□□ 1.36
SOX1-201ENST00000330949 FGF1P05230 155 aa23.52■■□□□ 1.36
SOX1-201ENST00000330949 TSPAN19P0C672 248 aa23.52■■□□□ 1.36
SOX1-201ENST00000330949 DARSP14868 501 aaKnown RBP23.52■■□□□ 1.36
SOX1-201ENST00000330949 MAP2K3P46734 347 aa23.52■■□□□ 1.36
SOX1-201ENST00000330949 ALDH9A1P49189 494 aa23.52■■□□□ 1.36
SOX1-201ENST00000330949 RRAS2P62070 204 aaPredicted RBP23.52■■□□□ 1.36
SOX1-201ENST00000330949 RGS1Q08116 209 aa23.52■■□□□ 1.36
SOX1-201ENST00000330949 LARS2Q15031 903 aaKnown RBP23.52■■□□□ 1.36
SOX1-201ENST00000330949 VMACQ2NL98 169 aa23.52■■□□□ 1.36
SOX1-201ENST00000330949 KIF18BQ86Y91 864 aa23.52■■□□□ 1.36
SOX1-201ENST00000330949 EEF1AKMT1Q8WVE0 214 aa23.52■■□□□ 1.36
SOX1-201ENST00000330949 IPPKQ9H8X2 491 aa23.52■■□□□ 1.36
SOX1-201ENST00000330949 MPP6Q9NZW5 540 aa23.52■■□□□ 1.36
SOX1-201ENST00000330949 DUSP12Q9UNI6 340 aa23.52■■□□□ 1.36
SOX1-201ENST00000330949 SLC9A3R1O14745 358 aaPredicted RBP23.51■■□□□ 1.35
SOX1-201ENST00000330949 MYL12BO14950 172 aa23.51■■□□□ 1.35
SOX1-201ENST00000330949 TSC22D2O75157 780 aa23.51■■□□□ 1.35
SOX1-201ENST00000330949 SCG5P05408 212 aa23.51■■□□□ 1.35
SOX1-201ENST00000330949 MYL12AP19105 171 aa23.51■■□□□ 1.35
SOX1-201ENST00000330949 HLA-DPA1P20036 260 aa23.51■■□□□ 1.35
SOX1-201ENST00000330949 PSMA1P25786 263 aaKnown RBP23.51■■□□□ 1.35
SOX1-201ENST00000330949 GPC1P35052 558 aa23.51■■□□□ 1.35
SOX1-201ENST00000330949 SMARCB1Q12824 385 aa23.51■■□□□ 1.35
SOX1-201ENST00000330949 PTPRNQ16849 979 aa23.51■■□□□ 1.35
SOX1-201ENST00000330949 PYDC2Q56P42 97 aa23.51■■□□□ 1.35
SOX1-201ENST00000330949 SUSD1Q6UWL2 747 aa23.51■■□□□ 1.35
SOX1-201ENST00000330949 WDR36Q8NI36 951 aaKnown RBP23.51■■□□□ 1.35
SOX1-201ENST00000330949 FATE1Q969F0 183 aa23.51■■□□□ 1.35
SOX1-201ENST00000330949 CDKN2AIPNLQ96HQ2 116 aa23.51■■□□□ 1.35
SOX1-201ENST00000330949 METTL2AQ96IZ6 378 aaKnown RBP23.51■■□□□ 1.35
SOX1-201ENST00000330949 CCM2Q9BSQ5 444 aa23.51■■□□□ 1.35
SOX1-201ENST00000330949 INPP5KQ9BT40 448 aa23.51■■□□□ 1.35
SOX1-201ENST00000330949 KATNBL1Q9H079 304 aa23.51■■□□□ 1.35
SOX1-201ENST00000330949 LRTM1Q9HBL6 345 aa23.51■■□□□ 1.35
SOX1-201ENST00000330949 ABCB9Q9NP78 766 aa23.51■■□□□ 1.35
SOX1-201ENST00000330949 MCUBQ9NWR8 336 aa23.51■■□□□ 1.35
SOX1-201ENST00000330949 COQ3Q9NZJ6 369 aa23.51■■□□□ 1.35
SOX1-201ENST00000330949 FNIP2Q9P278 1114 aa23.51■■□□□ 1.35
SOX1-201ENST00000330949 TNFRSF10DQ9UBN6 386 aa23.51■■□□□ 1.35
SOX1-201ENST00000330949 SEC14L4Q9UDX3 406 aa23.51■■□□□ 1.35
SOX1-201ENST00000330949 ELF5Q9UKW6 265 aaPredicted RBP23.51■■□□□ 1.35
SOX1-201ENST00000330949 TRIP12Q14669 1992 aaPredicted RBP23.51■■□□□ 1.35
SOX1-201ENST00000330949 FHP07954 510 aa23.51■■□□□ 1.35
SOX1-201ENST00000330949 HOXB9P17482 250 aaPredicted RBP23.51■■□□□ 1.35
SOX1-201ENST00000330949 RPS3P23396 243 aaKnown RBP eCLIP23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms