RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 IFNA8P32881 189 aa12.27□□□□□ -0.45
RETREG3-201ENST00000309428 ETV3P41162 512 aa12.27□□□□□ -0.45
RETREG3-201ENST00000309428 MASP1P48740 699 aa12.27□□□□□ -0.45
RETREG3-201ENST00000309428 RPS14P62263 151 aaKnown RBP12.27□□□□□ -0.45
RETREG3-201ENST00000309428 RPP38P78345 283 aaKnown RBP12.27□□□□□ -0.45
RETREG3-201ENST00000309428 NKX3-2P78367 333 aa12.27□□□□□ -0.45
RETREG3-201ENST00000309428 NFKB2Q00653 900 aa12.27□□□□□ -0.45
RETREG3-201ENST00000309428 NCF4Q15080 339 aa12.27□□□□□ -0.45
RETREG3-201ENST00000309428 Q6ZSR9 355 aa12.27□□□□□ -0.45
RETREG3-201ENST00000309428 RBFAQ8N0V3 343 aa12.27□□□□□ -0.45
RETREG3-201ENST00000309428 PELI3Q8N2H9 469 aa12.27□□□□□ -0.45
RETREG3-201ENST00000309428 PCNPQ8WW12 178 aaKnown RBP12.27□□□□□ -0.45
RETREG3-201ENST00000309428 ISL2Q96A47 359 aa12.27□□□□□ -0.45
RETREG3-201ENST00000309428 TP53INP1Q96A56 240 aa12.27□□□□□ -0.45
RETREG3-201ENST00000309428 TSPAN18Q96SJ8 248 aa12.27□□□□□ -0.45
RETREG3-201ENST00000309428 C8orf4Q9NR00 106 aa12.27□□□□□ -0.45
RETREG3-201ENST00000309428 KLHL1Q9NR64 748 aa12.27□□□□□ -0.45
RETREG3-201ENST00000309428 THUMPD1Q9NXG2 353 aaKnown RBP12.27□□□□□ -0.45
RETREG3-201ENST00000309428 STMN3Q9NZ72 180 aa12.27□□□□□ -0.45
RETREG3-201ENST00000309428 SAMD4AQ9UPU9 718 aaKnown RBP12.27□□□□□ -0.45
RETREG3-201ENST00000309428 SEC16AO15027 2179 aa12.27□□□□□ -0.45
RETREG3-201ENST00000309428 ALPLP05186 524 aa12.27□□□□□ -0.45
RETREG3-201ENST00000309428 RRM2P31350 389 aa12.27□□□□□ -0.45
RETREG3-201ENST00000309428 PPP5CP53041 499 aa12.27□□□□□ -0.45
RETREG3-201ENST00000309428 PRKAG1P54619 331 aa12.27□□□□□ -0.45
RETREG3-201ENST00000309428 CHIT1Q13231 466 aa12.27□□□□□ -0.45
RETREG3-201ENST00000309428 CATSPEREQ5SY80 951 aa12.27□□□□□ -0.45
RETREG3-201ENST00000309428 TRIM69Q86WT6 500 aa12.27□□□□□ -0.45
RETREG3-201ENST00000309428 TIGD4Q8IY51 512 aa12.27□□□□□ -0.45
RETREG3-201ENST00000309428 CADM2Q8N3J6 435 aa12.27□□□□□ -0.45
RETREG3-201ENST00000309428 SVOPLQ8N434 492 aa12.27□□□□□ -0.45
RETREG3-201ENST00000309428 NRTNQ99748 197 aa12.27□□□□□ -0.45
RETREG3-201ENST00000309428 TUBA1CQ9BQE3 449 aa12.27□□□□□ -0.45
RETREG3-201ENST00000309428 CAPN10Q9HC96 672 aa12.27□□□□□ -0.45
RETREG3-201ENST00000309428 HSPB11Q9Y547 144 aa12.27□□□□□ -0.45
RETREG3-201ENST00000309428 ZFC3H1O60293 1989 aaKnown RBP12.27□□□□□ -0.45
RETREG3-201ENST00000309428 SAGE2PA6NJ88 616 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 FXYD1O00168 92 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 BTN3A3O00478 584 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 TSPAN4O14817 238 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 ANXA5P08758 320 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 CCNYL3P0C7X3 344 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 SYN1P17600 705 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 DGKAP23743 735 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 BDKRB1P46663 353 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 TIAL1Q01085 375 aaKnown RBP eCLIP12.26□□□□□ -0.45
RETREG3-201ENST00000309428 CACNG1Q06432 222 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 NFATC2Q13469 925 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 PLEKHG6Q3KR16 790 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 ZNF544Q6NX49 715 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 ELMOD1Q8N336 334 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 HJURPQ8NCD3 748 aaPredicted RBP12.26□□□□□ -0.45
RETREG3-201ENST00000309428 PROKR1Q8TCW9 393 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 MAL2Q969L2 176 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 MGME1Q9BQP7 344 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 ITPAQ9BY32 194 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 DERL2Q9GZP9 239 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 MUC13Q9H3R2 512 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 IKZF5Q9H5V7 419 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 TAS2R16Q9NYV7 291 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 INTS6Q9UL03 887 aaKnown RBP12.26□□□□□ -0.45
RETREG3-201ENST00000309428 MIA3Q5JRA6 1907 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 ANTXRLA6NF34 631 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 LATO43561 262 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 SERPINI2O75830 405 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 TSPAN9O75954 239 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 C9P02748 559 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 ENGP17813 658 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 EPORP19235 508 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 OGNP20774 298 aaKnown RBP12.26□□□□□ -0.45
RETREG3-201ENST00000309428 HTR1EP28566 365 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 CDC42P60953 191 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 TYSND1Q2T9J0 566 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 CTU2Q2VPK5 515 aaKnown RBP12.26□□□□□ -0.45
RETREG3-201ENST00000309428 CXorf57Q6NSI4 855 aaKnown RBP12.26□□□□□ -0.45
RETREG3-201ENST00000309428 SPRED2Q7Z698 418 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 VRK3Q8IV63 474 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 POF1BQ8WVV4 589 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 TRIM45Q9H8W5 580 aaPredicted RBP12.26□□□□□ -0.45
RETREG3-201ENST00000309428 B4GALT6Q9UBX8 382 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 NUFIP1Q9UHK0 495 aaKnown RBP12.26□□□□□ -0.45
RETREG3-201ENST00000309428 RPS6KA6Q9UK32 745 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 DLGAP4Q9Y2H0 992 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 TRBV23OR9-2A0A075B6M9 112 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 WASH3PC4AMC7 463 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 CLIC1O00299 241 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 NNMTP40261 264 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 ARSIQ5FYB1 569 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 STEAP3Q658P3 488 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 DEF8Q6ZN54 512 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 TMPRSS11BQ86T26 416 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 DCP2Q8IU60 420 aaKnown RBP12.26□□□□□ -0.45
RETREG3-201ENST00000309428 AADATQ8N5Z0 425 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 OR4K1Q8NGD4 311 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 BRD9Q9H8M2 597 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 ARNT2Q9HBZ2 717 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 MED16Q9Y2X0 877 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 GPR45Q9Y5Y3 372 aa12.26□□□□□ -0.45
RETREG3-201ENST00000309428 FAM47E-STBD1D6RA91 191 aa12.25□□□□□ -0.45
RETREG3-201ENST00000309428 MEN1O00255 615 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms