RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Srfbp1Q9CZ91 441 aaKnown RBP9.44□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 D10Jhu81eQ9D172 266 aa9.44□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Rnase10Q9D5A9 208 aa9.44□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Padi3Q9Z184 664 aa9.44□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Sdccag3A2AIW0 432 aa9.44□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Rdh8D3Z6W3 317 aa9.44□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Gm3159K7N760 267 aa9.44□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Cd160O88875 185 aa9.44□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Tuba3aP05214 450 aaKnown RBP9.44□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Pcmt1P23506 227 aa9.44□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Arf5P84084 180 aaKnown RBP9.44□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Kcnk2P97438 426 aa9.44□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Pyroxd2Q3U4I7 581 aa9.44□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Arhgef9Q3UTH8 516 aa9.44□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Kif18bQ6PFD6 834 aa9.44□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 NanogQ80Z64 305 aa9.44□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Ugt2b35Q8BJL9 529 aa9.44□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Zhx3Q8C0Q2 951 aa9.44□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Acat2Q8CAY6 397 aa9.44□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Ca12Q8CI85 354 aa9.44□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Fmo2Q8K2I3 535 aa9.44□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Vmn1r84Q8R284 318 aa9.44□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 TbccQ8VCN9 341 aa9.44□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Olfr854Q8VFF1 315 aa9.44□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Acsm1Q91VA0 573 aa9.44□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Acsl6Q91WC3 697 aa9.44□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Tmem150aQ91WN2 271 aa9.44□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Kdelr2Q9CQM2 212 aa9.44□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Txndc17Q9CQM5 123 aa9.44□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Yae1d1Q9DAY6 216 aa9.44□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Snap29Q9ERB0 260 aa9.44□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Prl5a1Q9JII2 230 aa9.44□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Ap3m1Q9JKC8 418 aa9.44□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Gpc6Q9R087 555 aa9.44□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Enpp2Q9R1E6 862 aa9.44□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Slc22a4Q9Z306 553 aa9.44□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Znf106O88466 1888 aa9.44□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Olfr74A2BHP6 318 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Gm10718D3Z1I7 227 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Gm17174M0QWQ9 212 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Ring1O35730 406 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Rgs7O54829 469 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Ap1s1P61967 158 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Sox14Q04892 240 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Gsk3aQ2NL51 490 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Tmem255bQ5FW56 369 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Dcaf13Q6PAC3 445 aaKnown RBP9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Med26Q7TN02 588 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Olfr1418Q7TQS3 318 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Slitrk6Q8C110 840 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 ManbaQ8K2I4 879 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Olfr1276Q8VF40 312 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Usb1Q91W78 267 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 L2hgdhQ91YP0 464 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Eif3mQ99JX4 374 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Lactb2Q99KR3 288 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Prl7c1Q9CRB5 251 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Pfdn1Q9CWM4 122 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Cep97Q9CZ62 856 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Zfp84Q9D654 559 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Dap3Q9ER88 391 aaKnown RBP9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 GabrqQ9JLF1 638 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Foxe3Q9QY14 288 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 IL36RNQ9QYY1 156 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Vps29Q9QZ88 182 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Cldn9Q9Z0S7 217 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Nup210lQ9D2F7 1881 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Anxa3O35639 323 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Cldn2O88552 230 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 CkmP07310 381 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Ccnb2P30276 398 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Id2P41136 134 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Sstr4P49660 385 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Cdc42P60766 191 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 PomkQ3TUA9 349 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Q3V0E1 1183 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 PapolgQ6PCL9 739 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Slc2a12Q8BFW9 622 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Yipf4Q8C407 246 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Mtrf1Q8K126 446 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Gprc6aQ8K4Z6 928 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Akr1d1Q8VCX1 325 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Olfr474Q8VFC9 310 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Olfr1467Q8VFW1 308 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Vmn1r69Q8VIC1 319 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Dcun1d5Q9CXV9 237 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Uqcrc2Q9DB77 453 aaKnown RBP9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Wdr54Q9R0D8 334 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Tpk1Q9R0M5 243 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Dio2Q9Z1Y9 266 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Vmn2r90E9PXJ8 863 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Gm3755K7N743 167 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Gp1baO35930 734 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Cpa3P15089 417 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Aff3P51827 1254 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Copz1P61924 177 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Rad51Q08297 339 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Sap25Q1EHW4 186 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 BC030870Q3V2G4 71 aa9.43□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Il18r1Q61098 537 aa9.43□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms