RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Slc22a17Q9D9E0 401 aa12.3□□□□□ -0.44
Rnf4-201ENSMUST00000030992 1700086D15RikQ9D9E9 151 aa12.3□□□□□ -0.44
Rnf4-201ENSMUST00000030992 AgkQ9ESW4 421 aa12.3□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Gm45233A0A0N4SVE0 221 aa12.3□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Olfr319L7MTY4 306 aa12.3□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Gm6356L7N2A7 188 aa12.3□□□□□ -0.44
Rnf4-201ENSMUST00000030992 H2-M9O19442 342 aa12.3□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Kpna4O35343 521 aa12.3□□□□□ -0.44
Rnf4-201ENSMUST00000030992 ComtO88587 265 aa12.3□□□□□ -0.44
Rnf4-201ENSMUST00000030992 FhitO89106 150 aa12.3□□□□□ -0.44
Rnf4-201ENSMUST00000030992 HbaP01942 142 aa12.3□□□□□ -0.44
Rnf4-201ENSMUST00000030992 InaP46660 501 aa12.3□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Sox2P48432 319 aa12.3□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Jmjd8Q3TA59 316 aa12.3□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Taar7aQ5QD12 358 aa12.3□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Osbp2Q5QNQ6 908 aa12.3□□□□□ -0.44
Rnf4-201ENSMUST00000030992 AbrQ5SSL4 859 aa12.3□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Cyp1b1Q64429 543 aa12.3□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Znf32Q80V23 272 aa12.3□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Trim50Q810I2 483 aa12.3□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Pgs1Q8BHF7 553 aa12.3□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Hmbox1Q8BJA3 419 aa12.3□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Nrip1Q8CBD1 1161 aa12.3□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Rbms2Q8VC70 383 aaKnown RBP12.3□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Olfr575Q8VH16 318 aa12.3□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Depdc7Q91WS7 511 aa12.3□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Slc22a7Q91WU2 540 aa12.3□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Scpep1Q920A5 452 aa12.3□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Cyp4f13Q99N19 523 aa12.3□□□□□ -0.44
Rnf4-201ENSMUST00000030992 HgfacQ9R098 653 aa12.3□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Mcm3apQ9WUU9 1971 aa12.3□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Tet2Q4JK59 1912 aaKnown RBP12.3□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Fbxo47A2A6H3 451 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Kpna3O35344 521 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Dync1i2O88487 612 aaKnown RBP12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Gpx5P21765 221 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Ddx6P54823 483 aaKnown RBP12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Dab1P97318 588 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Sfmbt2Q5DTW2 938 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Nr1h4Q60641 488 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 OclnQ61146 521 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Fgfr3Q61851 801 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Ephx4Q6IE26 359 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Krt72Q6IME9 520 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Znf750Q8BH05 703 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Vps37aQ8CHS8 397 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Ints14Q8R3P6 515 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Olfr691Q8VGW5 322 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Camk1gQ91VB2 477 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Yaf2Q99LW6 179 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Gkn2Q9CQS6 184 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Spata1Q9D5R4 444 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Tex22Q9D9U4 189 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Rhobtb1Q9DAK3 695 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 IL36RNQ9QYY1 156 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Lilra6A0A0B4J1F3 663 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Gm13089A2AGW7 455 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Vsig10lD3YZF7 868 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Mtnd4P03911 459 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Ruvbl1P60122 456 aaKnown RBP12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Sox4Q06831 440 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Fam105aQ3TVP5 353 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Ms4a15Q3UPL6 245 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Phf12Q5SPL2 1003 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Fam149b1Q6NSV7 578 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Tas2r106Q7M724 308 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Fam205cQ80YD3 371 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Them6Q80ZW2 207 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Tgif2Q8C0Y1 237 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Guca1bQ8VBV8 201 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Olfr690Q8VH18 315 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Cxxc5Q91WA4 317 aaKnown RBP12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Ppp1r16aQ923M0 524 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Dach2Q925Q8 634 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Ska1Q9CPV1 254 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Psg23Q9D2U0 471 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 MrrfQ9D6S7 262 aaKnown RBP12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Psg21Q9DAV5 471 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Clec1bQ9JL99 229 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Arl10Q9QXJ4 243 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Rp1l1Q8CGM2 1859 aa12.29□□□□□ -0.44
Rnf4-201ENSMUST00000030992 CatsperbA2RTF1 1109 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 GmlE9PX31 176 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Vmn2r35E9Q7U8 861 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Ccl26F8VQM2 93 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Rhox2hK7N6P1 191 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Ptpn20O55082 426 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 PlaaP27612 794 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Ceacam1P31809 521 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Alox12P39655 663 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 AcadvlP50544 656 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Aup1P70295 410 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Sim1Q61045 765 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Ppp2r1bQ7TNP2 601 aaKnown RBP12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Rbm11Q80YT9 238 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Mrps35Q8BJZ4 320 aaKnown RBP12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Q8C3W1 322 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 B3gnt7Q8K0J2 397 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Vmn1r234Q8R298 329 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Olfr806Q8VFI2 313 aa12.28□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 32.9 ms