RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	DRGX	A6NNA5	263 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	DYRK3	O43781	588 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	WISP3	O95389	354 aa	Predicted RBP	11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	PRKACG	P22612	351 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	ELK4	P28324	431 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	IFNGR2	P38484	337 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	STK19	P49842	368 aa	Predicted RBP	11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	UGT2B15	P54855	530 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	TGM3	Q08188	693 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	PPIG	Q13427	754 aa	Known RBP eCLIP	11.94	□□□□□ -0.5	5e-7	■□□□□ 9.6
TMPO-212	ENST00000556029	TYSND1	Q2T9J0	566 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	TBC1D25	Q3MII6	688 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	HLA-DQA1	Q5Y7H0	255 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	TPGS2	Q68CL5	300 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	RTN4RL1	Q86UN2	441 aa	Predicted RBP	11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	RBFA	Q8N0V3	343 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	MEIOB	Q8N635	442 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	FNDC8	Q8TC99	324 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	TMBIM1	Q969X1	311 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	IL4I1	Q96RQ9	567 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	BRD9	Q9H8M2	597 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	SEC14L3	Q9UDX4	400 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	ING4	Q9UNL4	249 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	PDE10A	Q9Y233	779 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	SCN4A	P35499	1836 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	IGLV3-10	A0A075B6K4	115 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	ZNF840P	A6NDX5	716 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	PTPN2	P17706	415 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	HTR1E	P28566	365 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	HOXC8	P31273	242 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	PSMD4	P55036	377 aa	Known RBP	11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	TIAL1	Q01085	375 aa	Known RBP eCLIP	11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	CPTP	Q5TA50	214 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	SULT1C3	Q6IMI6	304 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	ERICH5	Q6P6B1	374 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	OR52L1	Q8NGH7	329 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	OR10G6	Q8NH81	332 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	CNPPD1	Q9BV87	410 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	ZCCHC2	Q9C0B9	1178 aa	Known RBP	11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	IMP3	Q9NV31	184 aa	Known RBP	11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	TULP3	O75386	442 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	STK16	O75716	305 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	ATE1	O95260	518 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	S100A9	P06702	114 aa	Known RBP	11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	DBI	P07108	87 aa	Known RBP	11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	NTS	P30990	170 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	MAGEA11	P43364	429 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	TEAD2	Q15562	447 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	OR2T11	Q8NH01	316 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	C2orf15	Q8WU43	125 aa	Known RBP	11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	PPCDC	Q96CD2	204 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	ITCH	Q96J02	903 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	TRNT1	Q96Q11	434 aa	Known RBP	11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	SLC38A2	Q96QD8	506 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	CGREF1	Q99674	301 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	TMEM175	Q9BSA9	504 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	ING3	Q9NXR8	418 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	COMMD9	Q9P000	198 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	TTC3	P53804	2025 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	CROCC	Q5TZA2	2017 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029		H3BMQ9	156 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	GRM6	O15303	877 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	GUCY1B2	O75343	617 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	CLDN7	O95471	211 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	RAP2A	P10114	183 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	VARS	P26640	1264 aa	Known RBP	11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	MAPK8	P45983	427 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	ZNF140	P52738	457 aa	Predicted RBP	11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	EMX2	Q04743	252 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	FPGS	Q05932	587 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	MGAT3	Q09327	533 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	LAPTM5	Q13571	262 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	DAG1	Q14118	895 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	TGFBI	Q15582	683 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	CYBRD1	Q53TN4	286 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	LIN54	Q6MZP7	749 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	PIANP	Q8IYJ0	282 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	ZNF683	Q8IZ20	524 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	MDGA1	Q8NFP4	955 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	COG8	Q96MW5	612 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	CHIA	Q9BZP6	476 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	INSL6	Q9Y581	213 aa		11.94	□□□□□ -0.5
TMPO-212	ENST00000556029	KHDRBS3	O75525	346 aa	Known RBP	11.93	□□□□□ -0.5
TMPO-212	ENST00000556029	EPHX1	P07099	455 aa		11.93	□□□□□ -0.5
TMPO-212	ENST00000556029	TCEA1	P23193	301 aa	Known RBP	11.93	□□□□□ -0.5
TMPO-212	ENST00000556029	RGR	P47804	291 aa		11.93	□□□□□ -0.5
TMPO-212	ENST00000556029	ARSF	P54793	590 aa		11.93	□□□□□ -0.5
TMPO-212	ENST00000556029	NTHL1	P78549	312 aa		11.93	□□□□□ -0.5
TMPO-212	ENST00000556029	GTF2H2	Q13888	395 aa		11.93	□□□□□ -0.5
TMPO-212	ENST00000556029	PCBP2	Q15366	365 aa	Known RBP eCLIP	11.93	□□□□□ -0.5
TMPO-212	ENST00000556029	CES5A	Q6NT32	575 aa		11.93	□□□□□ -0.5
TMPO-212	ENST00000556029	GTF2H2C	Q6P1K8	395 aa		11.93	□□□□□ -0.5
TMPO-212	ENST00000556029	PRR23B	Q6ZRT6	265 aa		11.93	□□□□□ -0.5
TMPO-212	ENST00000556029	ZNF420	Q8TAQ5	688 aa	Predicted RBP	11.93	□□□□□ -0.5
TMPO-212	ENST00000556029	NELL1	Q92832	810 aa		11.93	□□□□□ -0.5
TMPO-212	ENST00000556029	KLK6	Q92876	244 aa		11.93	□□□□□ -0.5
TMPO-212	ENST00000556029	EXOSC8	Q96B26	276 aa	Known RBP	11.93	□□□□□ -0.5
TMPO-212	ENST00000556029	MYEOV	Q96EZ4	313 aa		11.93	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms