RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 PPIL1Q9Y3C6 166 aa11.28□□□□□ -0.6
LINC01001-201ENST00000526704 KIAA1549LQ6ZVL6 1849 aa11.28□□□□□ -0.6
LINC01001-201ENST00000526704 KIF26AQ9ULI4 1882 aaPredicted RBP11.28□□□□□ -0.6
LINC01001-201ENST00000526704 OR2A25A4D2G3 310 aa11.28□□□□□ -0.6
LINC01001-201ENST00000526704 PRRG1O14668 218 aa11.28□□□□□ -0.6
LINC01001-201ENST00000526704 PRMT3O60678 531 aa11.28□□□□□ -0.6
LINC01001-201ENST00000526704 CPSF4O95639 269 aaKnown RBP11.28□□□□□ -0.6
LINC01001-201ENST00000526704 PCSK2P16519 638 aa11.28□□□□□ -0.6
LINC01001-201ENST00000526704 EFNA1P20827 205 aaPredicted RBP11.28□□□□□ -0.6
LINC01001-201ENST00000526704 TGFBR1P36897 503 aa11.28□□□□□ -0.6
LINC01001-201ENST00000526704 ST13P50502 369 aaKnown RBP11.28□□□□□ -0.6
LINC01001-201ENST00000526704 CREMQ03060 361 aa11.28□□□□□ -0.6
LINC01001-201ENST00000526704 CSTF3Q12996 717 aaKnown RBP11.28□□□□□ -0.6
LINC01001-201ENST00000526704 SF1Q15637 639 aaKnown RBP11.28□□□□□ -0.6
LINC01001-201ENST00000526704 PRSS48Q7RTY5 328 aa11.28□□□□□ -0.6
LINC01001-201ENST00000526704 ADCK1Q86TW2 530 aa11.28□□□□□ -0.6
LINC01001-201ENST00000526704 BBS7Q8IWZ6 715 aa11.28□□□□□ -0.6
LINC01001-201ENST00000526704 ATG16L2Q8NAA4 619 aa11.28□□□□□ -0.6
LINC01001-201ENST00000526704 REEP1Q9H902 201 aa11.28□□□□□ -0.6
LINC01001-201ENST00000526704 CCNB1IP1Q9NPC3 277 aa11.28□□□□□ -0.6
LINC01001-201ENST00000526704 PCDH12Q9NPG4 1184 aa11.28□□□□□ -0.6
LINC01001-201ENST00000526704 RASSF1Q9NS23 344 aa11.28□□□□□ -0.6
LINC01001-201ENST00000526704 CD84Q9UIB8 345 aa11.28□□□□□ -0.6
LINC01001-201ENST00000526704 BTBD3Q9Y2F9 522 aa11.28□□□□□ -0.6
LINC01001-201ENST00000526704 DOCK6Q96HP0 2047 aa11.28□□□□□ -0.6
LINC01001-201ENST00000526704 CCDC88CQ9P219 2028 aa11.28□□□□□ -0.6
LINC01001-201ENST00000526704 TRIM43BA6NCK2 446 aa11.27□□□□□ -0.6
LINC01001-201ENST00000526704 TTC34A8MYJ7 566 aa11.27□□□□□ -0.6
LINC01001-201ENST00000526704 SLC16A5O15375 505 aa11.27□□□□□ -0.6
LINC01001-201ENST00000526704 BNIP3LO60238 219 aa11.27□□□□□ -0.6
LINC01001-201ENST00000526704 PCDHGA12O60330 932 aa11.27□□□□□ -0.6
LINC01001-201ENST00000526704 MRPS14O60783 128 aaKnown RBP11.27□□□□□ -0.6
LINC01001-201ENST00000526704 LCKP06239 509 aa11.27□□□□□ -0.6
LINC01001-201ENST00000526704 NUDT7P0C024 238 aa11.27□□□□□ -0.6
LINC01001-201ENST00000526704 LAMP1P11279 417 aa11.27□□□□□ -0.6
LINC01001-201ENST00000526704 CYP2A7P20853 494 aa11.27□□□□□ -0.6
LINC01001-201ENST00000526704 RXRGP48443 463 aa11.27□□□□□ -0.6
LINC01001-201ENST00000526704 INAQ16352 499 aa11.27□□□□□ -0.6
LINC01001-201ENST00000526704 PROX2Q3B8N5 592 aa11.27□□□□□ -0.6
LINC01001-201ENST00000526704 ENTHD1Q8IYW4 607 aa11.27□□□□□ -0.6
LINC01001-201ENST00000526704 CDC26Q8NHZ8 85 aa11.27□□□□□ -0.6
LINC01001-201ENST00000526704 WDR20Q8TBZ3 569 aa11.27□□□□□ -0.6
LINC01001-201ENST00000526704 SH3KBP1Q96B97 665 aa11.27□□□□□ -0.6
LINC01001-201ENST00000526704 C7orf34Q96L11 122 aa11.27□□□□□ -0.6
LINC01001-201ENST00000526704 CORO1BQ9BR76 489 aa11.27□□□□□ -0.6
LINC01001-201ENST00000526704 SUV39H2Q9H5I1 410 aa11.27□□□□□ -0.6
LINC01001-201ENST00000526704 PABPN1LA6NDY0 278 aaKnown RBP11.27□□□□□ -0.61
LINC01001-201ENST00000526704 MTX2O75431 263 aa11.27□□□□□ -0.61
LINC01001-201ENST00000526704 FKBP9O95302 570 aa11.27□□□□□ -0.61
LINC01001-201ENST00000526704 C9P02748 559 aa11.27□□□□□ -0.61
LINC01001-201ENST00000526704 SOD2P04179 222 aa11.27□□□□□ -0.61
LINC01001-201ENST00000526704 ZNF24P17028 368 aa11.27□□□□□ -0.61
LINC01001-201ENST00000526704 FUT4P22083 530 aa11.27□□□□□ -0.61
LINC01001-201ENST00000526704 TGM1P22735 817 aa11.27□□□□□ -0.61
LINC01001-201ENST00000526704 GRK3P35626 688 aa11.27□□□□□ -0.61
LINC01001-201ENST00000526704 SERPINB10P48595 397 aa11.27□□□□□ -0.61
LINC01001-201ENST00000526704 AP1S2P56377 157 aa11.27□□□□□ -0.61
LINC01001-201ENST00000526704 C21orf58P58505 322 aa11.27□□□□□ -0.61
LINC01001-201ENST00000526704 SNRPD1P62314 119 aaKnown RBP11.27□□□□□ -0.61
LINC01001-201ENST00000526704 RPP38P78345 283 aaKnown RBP11.27□□□□□ -0.61
LINC01001-201ENST00000526704 KCNJ10P78508 379 aa11.27□□□□□ -0.61
LINC01001-201ENST00000526704 CYP4F8P98187 520 aa11.27□□□□□ -0.61
LINC01001-201ENST00000526704 NPRL3Q12980 569 aa11.27□□□□□ -0.61
LINC01001-201ENST00000526704 CAMK2GQ13555 558 aaPredicted RBP11.27□□□□□ -0.61
LINC01001-201ENST00000526704 HIST2H2ACQ16777 129 aaPredicted RBP11.27□□□□□ -0.61
LINC01001-201ENST00000526704 PAGE2BQ5JRK9 111 aa11.27□□□□□ -0.61
LINC01001-201ENST00000526704 PLEKHS1Q5SXH7 462 aa11.27□□□□□ -0.61
LINC01001-201ENST00000526704 C22orf39Q6P5X5 142 aa11.27□□□□□ -0.61
LINC01001-201ENST00000526704 AHSA2Q719I0 299 aa11.27□□□□□ -0.61
LINC01001-201ENST00000526704 METTL3Q86U44 580 aaKnown RBP11.27□□□□□ -0.61
LINC01001-201ENST00000526704 FIBINQ8TAL6 211 aa11.27□□□□□ -0.61
LINC01001-201ENST00000526704 ITPKCQ96DU7 683 aa11.27□□□□□ -0.61
LINC01001-201ENST00000526704 ABHD8Q96I13 439 aa11.27□□□□□ -0.61
LINC01001-201ENST00000526704 SCLYQ96I15 445 aa11.27□□□□□ -0.61
LINC01001-201ENST00000526704 TPD52L3Q96J77 140 aa11.27□□□□□ -0.61
LINC01001-201ENST00000526704 GABARAPL3Q9BY60 117 aa11.27□□□□□ -0.61
LINC01001-201ENST00000526704 SLIRPQ9GZT3 109 aaKnown RBP11.27□□□□□ -0.61
LINC01001-201ENST00000526704 SPATA6Q9NWH7 488 aaPredicted RBP11.27□□□□□ -0.61
LINC01001-201ENST00000526704 VPS4AQ9UN37 437 aa11.27□□□□□ -0.61
LINC01001-201ENST00000526704 PCDHB11Q9Y5F2 797 aa11.27□□□□□ -0.61
LINC01001-201ENST00000526704 INSL5Q9Y5Q6 135 aa11.27□□□□□ -0.61
LINC01001-201ENST00000526704 MTCL1Q9Y4B5 1905 aaKnown RBP11.27□□□□□ -0.61
LINC01001-201ENST00000526704 TMEM229AB2RXF0 380 aa11.26□□□□□ -0.61
LINC01001-201ENST00000526704 E7EQ34 232 aa11.26□□□□□ -0.61
LINC01001-201ENST00000526704 SCAMP2O15127 329 aaKnown RBP11.26□□□□□ -0.61
LINC01001-201ENST00000526704 ATP1B2P14415 290 aaPredicted RBP11.26□□□□□ -0.61
LINC01001-201ENST00000526704 GJA8P48165 433 aa11.26□□□□□ -0.61
LINC01001-201ENST00000526704 SPINT3P49223 89 aa11.26□□□□□ -0.61
LINC01001-201ENST00000526704 FPGSQ05932 587 aa11.26□□□□□ -0.61
LINC01001-201ENST00000526704 VEZF1Q14119 521 aa11.26□□□□□ -0.61
LINC01001-201ENST00000526704 UBE2UQ5VVX9 321 aa11.26□□□□□ -0.61
LINC01001-201ENST00000526704 LIPJQ5W064 366 aa11.26□□□□□ -0.61
LINC01001-201ENST00000526704 RASGRP3Q8IV61 690 aa11.26□□□□□ -0.61
LINC01001-201ENST00000526704 CPXM2Q8N436 756 aa11.26□□□□□ -0.61
LINC01001-201ENST00000526704 IPCEF1Q8WWN9 437 aaPredicted RBP11.26□□□□□ -0.61
LINC01001-201ENST00000526704 DNASE1L2Q92874 299 aa11.26□□□□□ -0.61
LINC01001-201ENST00000526704 C11orf24Q96F05 449 aaPredicted RBP11.26□□□□□ -0.61
LINC01001-201ENST00000526704 MAGEB10Q96LZ2 347 aaPredicted RBP11.26□□□□□ -0.61
LINC01001-201ENST00000526704 MTERF1Q99551 399 aaKnown RBP11.26□□□□□ -0.61
LINC01001-201ENST00000526704 EPYCQ99645 322 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms