RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 HDHD5Q9BXW7 423 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 TKTL2Q9H0I9 626 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 FBRSL1Q9HCM7 1045 aaKnown RBP2.95□□□□□ -1.94
CSDE1-208ENST00000524652 LZTFL1Q9NQ48 299 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 HEBP1Q9NRV9 189 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 SLC22A11Q9NSA0 550 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 OLA1Q9NTK5 396 aaKnown RBP2.95□□□□□ -1.94
CSDE1-208ENST00000524652 PARVAQ9NVD7 372 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 ETNK2Q9NVF9 386 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 ZNHIT6Q9NWK9 470 aaKnown RBP2.95□□□□□ -1.94
CSDE1-208ENST00000524652 DDIT4Q9NX09 232 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 TRMT1Q9NXH9 659 aaKnown RBP2.95□□□□□ -1.94
CSDE1-208ENST00000524652 ARHGEF38Q9NXL2 777 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 GTSE1Q9NYZ3 720 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 GDE1Q9NZC3 331 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 WDR35Q9P2L0 1181 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 PCSK1NQ9UHG2 260 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 MUTYHQ9UIF7 546 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 SLC25A13Q9UJS0 675 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 STOML2Q9UJZ1 356 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 PPP2R2CQ9Y2T4 447 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 HBS1LQ9Y450 684 aaKnown RBP2.95□□□□□ -1.94
CSDE1-208ENST00000524652 SCINQ9Y6U3 715 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 RELNP78509 3460 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 RIF1Q5UIP0 2472 aaKnown RBP2.95□□□□□ -1.94
CSDE1-208ENST00000524652 PI4KAP42356 2102 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 FREM2Q5SZK8 3169 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 TDRD6O60522 2096 aaKnown RBP2.94□□□□□ -1.94
CSDE1-208ENST00000524652 NOTCH2Q04721 2471 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 LRP4O75096 1905 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 TRPM6Q9BX84 2022 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 A0A0B4J293 547 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 IGHV4-28A0A0C4DH34 117 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 AGAP5A6NIR3 686 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 EFCAB8A8MWE9 144 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 E9PAM4 449 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 PI4K2BG5E9Z4 385 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 RNF103O00237 685 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 CHADO15335 359 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 PALMO75781 387 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 PROSCO94903 275 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 FTCDO95954 541 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 CD160O95971 181 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 PDGFBP01127 241 aaPredicted RBP2.94□□□□□ -1.94
CSDE1-208ENST00000524652 PENKP01210 267 aaPredicted RBP2.94□□□□□ -1.94
CSDE1-208ENST00000524652 UMODP07911 640 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 SNRNP70P08621 437 aaKnown RBP2.94□□□□□ -1.94
CSDE1-208ENST00000524652 CISD3P0C7P0 127 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 ENO3P13929 434 aaPredicted RBP2.94□□□□□ -1.94
CSDE1-208ENST00000524652 NAGAP17050 411 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 GOT1P17174 413 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 PSMC3P17980 439 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 CD72P21854 359 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 GSTM2P28161 218 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 TYK2P29597 1187 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 SDC4P31431 198 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 CTNNA1P35221 906 aaKnown RBP2.94□□□□□ -1.94
CSDE1-208ENST00000524652 RDXP35241 583 aaKnown RBP2.94□□□□□ -1.94
CSDE1-208ENST00000524652 PCK1P35558 622 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 GJC1P36383 396 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 PEX5P50542 639 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 CDH12P55289 794 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 RPS24P62847 133 aaKnown RBP2.94□□□□□ -1.94
CSDE1-208ENST00000524652 COG7P83436 770 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 BTKQ06187 659 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 TRAF3Q13114 568 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 RUNX3Q13761 415 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 SPA17Q15506 151 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 DPYSL2Q16555 572 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 GXYLT1Q4G148 440 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 OTUD3Q5T2D3 398 aaPredicted RBP2.94□□□□□ -1.94
CSDE1-208ENST00000524652 PPP1R2P3Q6NXS1 205 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 FBXL22Q6P050 247 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 SCYL2Q6P3W7 929 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 TPGS1Q6ZTW0 290 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 MTSS1LQ765P7 747 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 RSRC2Q7L4I2 434 aaKnown RBP2.94□□□□□ -1.94
CSDE1-208ENST00000524652 KIAA1328Q86T90 577 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 NT5DC3Q86UY8 548 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 VPS36Q86VN1 386 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 NLRP14Q86W24 1093 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 CCAR2Q8N163 923 aaKnown RBP2.94□□□□□ -1.94
CSDE1-208ENST00000524652 CPXM2Q8N436 756 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 RFLNBQ8N5W9 214 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 NPWQ8N729 165 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 MSANTD4Q8NCY6 345 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 CCDC112Q8NEF3 446 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 CEP76Q8TAP6 659 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 KIAA1524Q8TCG1 905 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 RNF139Q8WU17 664 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 DEPDC1BQ8WUY9 529 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 FAR1Q8WVX9 515 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 TMED6Q8WW62 240 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 RAPGEF5Q92565 580 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 HSPH1Q92598 858 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 NTAN1Q96AB6 310 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 ALG14Q96F25 216 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 CNPY3Q9BT09 278 aa2.94□□□□□ -1.94
CSDE1-208ENST00000524652 TRMT61BQ9BVS5 477 aaKnown RBP2.94□□□□□ -1.94
CSDE1-208ENST00000524652 IFT27Q9BW83 186 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms