RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 ZW10O43264 779 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 PCDH7O60245 1069 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 KLK8O60259 260 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 APOA1P02647 267 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 HKDC1Q2TB90 917 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 VRK3Q8IV63 474 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 CELF5Q8N6W0 485 aaKnown RBP11.99□□□□□ -0.49
HSPG2-211ENST00000486901 AMER2Q8N7J2 671 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 PDFQ9HBH1 243 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 FBXL12Q9NXK8 326 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 COQ3Q9NZJ6 369 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 NUFIP1Q9UHK0 495 aaKnown RBP11.99□□□□□ -0.49
HSPG2-211ENST00000486901 ZNF221Q9UK13 617 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 IFT52Q9Y366 437 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 PCDHB5Q9Y5E4 795 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 MED26O95402 600 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 PPP3CCP48454 512 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 RGS4P49798 205 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 ARMC4Q5T2S8 1044 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 PAMR1Q6UXH9 720 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 MMAAQ8IVH4 418 aaKnown RBP11.99□□□□□ -0.49
HSPG2-211ENST00000486901 CADM2Q8N3J6 435 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 WDR36Q8NI36 951 aaKnown RBP11.99□□□□□ -0.49
HSPG2-211ENST00000486901 SUSD3Q96L08 255 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 CCDC115Q96NT0 180 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 MGME1Q9BQP7 344 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 CLSTN3Q9BQT9 956 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 CTPS2Q9NRF8 586 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 KLHL20Q9Y2M5 609 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 TNPO3Q9Y5L0 923 aaKnown RBP11.99□□□□□ -0.49
HSPG2-211ENST00000486901 SPEGQ15772 3267 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 ADAM12O43184 909 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 KCNK5O95279 499 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 CLDN9O95484 217 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 FPR1P21462 350 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 CORO1AP31146 461 aaKnown RBP11.98□□□□□ -0.49
HSPG2-211ENST00000486901 CAV3P56539 151 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 VMACQ2NL98 169 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 TBRG1Q3YBR2 411 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 PAQR6Q6TCH4 344 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 SERPINA13PQ6UXR4 307 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 PRSS48Q7RTY5 328 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 NLRP8Q86W28 1048 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 NAGSQ8N159 534 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 GPR151Q8TDV0 419 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 MS4A4AQ96JQ5 239 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 FBXO44Q9H4M3 255 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 CLEC2DQ9UHP7 191 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 NDRG4Q9ULP0 352 aaKnown RBP11.98□□□□□ -0.49
HSPG2-211ENST00000486901 WASH4PA8MWX3 477 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 TNFRSF11BO00300 401 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 PRAMEF4O60810 478 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 TSC22D2O75157 780 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 EPN2O95208 641 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 NPPAP01160 153 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 ESR1P03372 595 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 ADORA3P0DMS8 318 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 PTNP21246 168 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 PTGER3P43115 390 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 ARF5P84085 180 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 LRRC26Q2I0M4 334 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 ZFP69Q49AA0 526 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 PRAMEF9Q5VWM5 478 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 GALNT7Q86SF2 657 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 ZNF605Q86T29 641 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 C2orf73Q8N5S3 287 aaPredicted RBP11.98□□□□□ -0.49
HSPG2-211ENST00000486901 WFDC5Q8TCV5 224 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 RDH12Q96NR8 316 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 ADGRE3Q9BY15 652 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 RANGRFQ9HD47 186 aaPredicted RBP11.98□□□□□ -0.49
HSPG2-211ENST00000486901 IL26Q9NPH9 171 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 GIMAP4Q9NUV9 329 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 FZD4Q9ULV1 537 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 SAMD4AQ9UPU9 718 aaKnown RBP11.98□□□□□ -0.49
HSPG2-211ENST00000486901 NAALAD2Q9Y3Q0 740 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 PCM1Q15154 2024 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 M0QZQ0 153 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 HOXC11O43248 304 aaPredicted RBP11.98□□□□□ -0.49
HSPG2-211ENST00000486901 SNX4O95219 450 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 RETP07949 1114 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 ETFAP13804 333 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 ZNF7P17097 686 aaPredicted RBP11.98□□□□□ -0.49
HSPG2-211ENST00000486901 CYP4F8P98187 520 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 CAPN13Q6MZZ7 669 aaPredicted RBP11.98□□□□□ -0.49
HSPG2-211ENST00000486901 TRAF7Q6Q0C0 670 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 TAS1R1Q7RTX1 841 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 TMEM173Q86WV6 379 aaPredicted RBP11.98□□□□□ -0.49
HSPG2-211ENST00000486901 CAMKK1Q8N5S9 505 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 TADA1Q96BN2 335 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 TCF25Q9BQ70 676 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 MAP4K5Q9Y4K4 846 aa11.98□□□□□ -0.49
HSPG2-211ENST00000486901 GREB1Q4ZG55 1949 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 CKAP5Q14008 2032 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 MAGEB17A8MXT2 336 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 PCDH17O14917 1159 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 KRT6AP02538 564 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 KRT6BP04259 564 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 RPLP0P05388 317 aaKnown RBP11.97□□□□□ -0.49
HSPG2-211ENST00000486901 HOXB8P17481 243 aaPredicted RBP11.97□□□□□ -0.49
HSPG2-211ENST00000486901 KRT6CP48668 564 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms