RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 APOBEC4Q8WW27 367 aaKnown RBP4.33□□□□□ -1.72
PTCD3-211ENST00000476215 PIK3R3Q92569 461 aa4.33□□□□□ -1.72
PTCD3-211ENST00000476215 AZIN2Q96A70 460 aa4.33□□□□□ -1.72
PTCD3-211ENST00000476215 ART5Q96L15 291 aa4.33□□□□□ -1.72
PTCD3-211ENST00000476215 KLHL5Q96PQ7 755 aa4.33□□□□□ -1.72
PTCD3-211ENST00000476215 NDNQ99608 321 aa4.33□□□□□ -1.72
PTCD3-211ENST00000476215 LPAR4Q99677 370 aa4.33□□□□□ -1.72
PTCD3-211ENST00000476215 NKX3-1Q99801 234 aaPredicted RBP4.33□□□□□ -1.72
PTCD3-211ENST00000476215 ASCL2Q99929 193 aa4.33□□□□□ -1.72
PTCD3-211ENST00000476215 ADPGKQ9BRR6 497 aa4.33□□□□□ -1.72
PTCD3-211ENST00000476215 RNF121Q9H920 327 aa4.33□□□□□ -1.72
PTCD3-211ENST00000476215 MAN2C1Q9NTJ4 1040 aa4.33□□□□□ -1.72
PTCD3-211ENST00000476215 MRGBPQ9NV56 204 aa4.33□□□□□ -1.72
PTCD3-211ENST00000476215 C17orf105B2RV13 164 aa4.32□□□□□ -1.72
PTCD3-211ENST00000476215 C2CD4DB7Z1M9 353 aa4.32□□□□□ -1.72
PTCD3-211ENST00000476215 F8VVB4 439 aa4.32□□□□□ -1.72
PTCD3-211ENST00000476215 F8VWA3 439 aa4.32□□□□□ -1.72
PTCD3-211ENST00000476215 PPIP5K2O43314 1243 aa4.32□□□□□ -1.72
PTCD3-211ENST00000476215 SIX3O95343 332 aaPredicted RBP4.32□□□□□ -1.72
PTCD3-211ENST00000476215 PRKAR1AP10644 381 aa4.32□□□□□ -1.72
PTCD3-211ENST00000476215 SLC6A12P48065 614 aa4.32□□□□□ -1.72
PTCD3-211ENST00000476215 LEPRP48357 1165 aaKnown RBP4.32□□□□□ -1.72
PTCD3-211ENST00000476215 PAX9P55771 341 aa4.32□□□□□ -1.72
PTCD3-211ENST00000476215 ROR1Q01973 937 aa4.32□□□□□ -1.72
PTCD3-211ENST00000476215 SULT2A1Q06520 285 aa4.32□□□□□ -1.72
PTCD3-211ENST00000476215 TICAM2Q86XR7 235 aa4.32□□□□□ -1.72
PTCD3-211ENST00000476215 OR8H3Q8N146 312 aa4.32□□□□□ -1.72
PTCD3-211ENST00000476215 SIX6OS1Q8N1H7 587 aa4.32□□□□□ -1.72
PTCD3-211ENST00000476215 LRTM2Q8N967 370 aa4.32□□□□□ -1.72
PTCD3-211ENST00000476215 OR2T6Q8NHC8 308 aa4.32□□□□□ -1.72
PTCD3-211ENST00000476215 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.32□□□□□ -1.72
PTCD3-211ENST00000476215 SLC26A7Q8TE54 656 aa4.32□□□□□ -1.72
PTCD3-211ENST00000476215 P2RX5Q93086 422 aa4.32□□□□□ -1.72
PTCD3-211ENST00000476215 BSCL2Q96G97 398 aaPredicted RBP4.32□□□□□ -1.72
PTCD3-211ENST00000476215 ERO1AQ96HE7 468 aa4.32□□□□□ -1.72
PTCD3-211ENST00000476215 BTBD9Q96Q07 612 aa4.32□□□□□ -1.72
PTCD3-211ENST00000476215 CLEC7AQ9BXN2 247 aa4.32□□□□□ -1.72
PTCD3-211ENST00000476215 ZWILCHQ9H900 591 aa4.32□□□□□ -1.72
PTCD3-211ENST00000476215 GRPEL1Q9HAV7 217 aa4.32□□□□□ -1.72
PTCD3-211ENST00000476215 KLHL8Q9P2G9 620 aaPredicted RBP4.32□□□□□ -1.72
PTCD3-211ENST00000476215 GTF3C4Q9UKN8 822 aa4.32□□□□□ -1.72
PTCD3-211ENST00000476215 ANGPTL3Q9Y5C1 460 aa4.32□□□□□ -1.72
PTCD3-211ENST00000476215 ABCC8Q09428 1581 aa4.31□□□□□ -1.72
PTCD3-211ENST00000476215 IFT140Q96RY7 1462 aa4.31□□□□□ -1.72
PTCD3-211ENST00000476215 CYSRT1A8MQ03 144 aa4.31□□□□□ -1.72
PTCD3-211ENST00000476215 MAGEC1O60732 1142 aa4.31□□□□□ -1.72
PTCD3-211ENST00000476215 FCGR3BO75015 233 aa4.31□□□□□ -1.72
PTCD3-211ENST00000476215 HSP90AB1P08238 724 aaKnown RBP4.31□□□□□ -1.72
PTCD3-211ENST00000476215 F3P13726 295 aa4.31□□□□□ -1.72
PTCD3-211ENST00000476215 RPL35AP18077 110 aaKnown RBP4.31□□□□□ -1.72
PTCD3-211ENST00000476215 PSMB4P28070 264 aa4.31□□□□□ -1.72
PTCD3-211ENST00000476215 PTK6Q13882 451 aa4.31□□□□□ -1.72
PTCD3-211ENST00000476215 SCARB2Q14108 478 aa4.31□□□□□ -1.72
PTCD3-211ENST00000476215 TRIM29Q14134 588 aa4.31□□□□□ -1.72
PTCD3-211ENST00000476215 CDO1Q16878 200 aa4.31□□□□□ -1.72
PTCD3-211ENST00000476215 HECTD3Q5T447 861 aa4.31□□□□□ -1.72
PTCD3-211ENST00000476215 TXNRD3NBQ6F5E7 133 aa4.31□□□□□ -1.72
PTCD3-211ENST00000476215 FAM166AQ6J272 317 aa4.31□□□□□ -1.72
PTCD3-211ENST00000476215 TTC27Q6P3X3 843 aa4.31□□□□□ -1.72
PTCD3-211ENST00000476215 CYB5D1Q6P9G0 228 aa4.31□□□□□ -1.72
PTCD3-211ENST00000476215 FIP1L1Q6UN15 594 aaKnown RBP4.31□□□□□ -1.72
PTCD3-211ENST00000476215 ANKRD33Q7Z3H0 272 aa4.31□□□□□ -1.72
PTCD3-211ENST00000476215 PIGWQ7Z7B1 504 aa4.31□□□□□ -1.72
PTCD3-211ENST00000476215 CROCCP3Q8IVE0 287 aa4.31□□□□□ -1.72
PTCD3-211ENST00000476215 RCOR2Q8IZ40 523 aa4.31□□□□□ -1.72
PTCD3-211ENST00000476215 ZNF486Q96H40 463 aaPredicted RBP4.31□□□□□ -1.72
PTCD3-211ENST00000476215 CCDC114Q96M63 670 aa4.31□□□□□ -1.72
PTCD3-211ENST00000476215 AK8Q96MA6 479 aa4.31□□□□□ -1.72
PTCD3-211ENST00000476215 GDAP1L1Q96MZ0 367 aa4.31□□□□□ -1.72
PTCD3-211ENST00000476215 CDCA3Q99618 268 aaPredicted RBP4.31□□□□□ -1.72
PTCD3-211ENST00000476215 CDK19Q9BWU1 502 aa4.31□□□□□ -1.72
PTCD3-211ENST00000476215 NYXQ9GZU5 481 aa4.31□□□□□ -1.72
PTCD3-211ENST00000476215 MINDY3Q9H8M7 445 aa4.31□□□□□ -1.72
PTCD3-211ENST00000476215 LMAN1LQ9HAT1 526 aa4.31□□□□□ -1.72
PTCD3-211ENST00000476215 PHPT1Q9NRX4 125 aaPredicted RBP4.31□□□□□ -1.72
PTCD3-211ENST00000476215 TMEM181Q9P2C4 612 aa4.31□□□□□ -1.72
PTCD3-211ENST00000476215 RASAL2Q9UJF2 1139 aa4.31□□□□□ -1.72
PTCD3-211ENST00000476215 PPP1R3CQ9UQK1 317 aa4.31□□□□□ -1.72
PTCD3-211ENST00000476215 TOPBP1Q92547 1522 aa4.31□□□□□ -1.72
PTCD3-211ENST00000476215 ZNF608Q9ULD9 1512 aaPredicted RBP4.31□□□□□ -1.72
PTCD3-211ENST00000476215 IL16Q14005 1332 aa4.3□□□□□ -1.72
PTCD3-211ENST00000476215 A0A087WUV0 522 aaPredicted RBP4.3□□□□□ -1.72
PTCD3-211ENST00000476215 TRBV4-1A0A0J9YWV2 114 aa4.3□□□□□ -1.72
PTCD3-211ENST00000476215 C5orf52A6NGY3 159 aa4.3□□□□□ -1.72
PTCD3-211ENST00000476215 TEX28O15482 410 aa4.3□□□□□ -1.72
PTCD3-211ENST00000476215 FLRT2O43155 660 aa4.3□□□□□ -1.72
PTCD3-211ENST00000476215 KRT33AO76009 404 aa4.3□□□□□ -1.72
PTCD3-211ENST00000476215 CLDN1O95832 211 aa4.3□□□□□ -1.72
PTCD3-211ENST00000476215 C9P02748 559 aa4.3□□□□□ -1.72
PTCD3-211ENST00000476215 VTNP04004 478 aa4.3□□□□□ -1.72
PTCD3-211ENST00000476215 CDX1P47902 265 aaPredicted RBP4.3□□□□□ -1.72
PTCD3-211ENST00000476215 SGCGQ13326 291 aa4.3□□□□□ -1.72
PTCD3-211ENST00000476215 TWISTNBQ3B726 338 aaPredicted RBP4.3□□□□□ -1.72
PTCD3-211ENST00000476215 SPOUT1Q5T280 376 aaKnown RBP4.3□□□□□ -1.72
PTCD3-211ENST00000476215 FUT10Q6P4F1 479 aa4.3□□□□□ -1.72
PTCD3-211ENST00000476215 NOTUMQ6P988 496 aa4.3□□□□□ -1.72
PTCD3-211ENST00000476215 BTNL8Q6UX41 500 aa4.3□□□□□ -1.72
PTCD3-211ENST00000476215 LEKR1Q6ZMV7 388 aa4.3□□□□□ -1.72
PTCD3-211ENST00000476215 SLC24A5Q71RS6 500 aa4.3□□□□□ -1.72
PTCD3-211ENST00000476215 FCRLAQ7L513 359 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms