RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 PNPP00491 289 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 VTNP04004 478 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 YES1P07947 543 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 UROSP10746 265 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 F3P13726 295 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 CD59P13987 128 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 VCLP18206 1134 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 TIMP3P35625 211 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 MAGEA11P43364 429 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 OR3A3P47888 321 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 KIAA1024LP59773 190 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 GCNT1Q02742 428 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 GPR33Q49SQ1 333 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 FAM76BQ5HYJ3 339 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 STPG1Q5TH74 334 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 LRRC38Q5VT99 294 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 FAM46CQ5VWP2 391 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 TTC27Q6P3X3 843 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 MARK2Q7KZI7 788 aaKnown RBP3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 SLC16A9Q7RTY1 509 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 PIGWQ7Z7B1 504 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 DCUN1D3Q8IWE4 304 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 LSMEM2Q8N112 164 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 FAM89BQ8N5H3 189 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 SPC24Q8NBT2 197 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 OR10V1Q8NGI7 309 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 LRRC8CQ8TDW0 803 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 PIK3R3Q92569 461 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 DYRK2Q92630 601 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 ZNF524Q96C55 264 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 PDLIM5Q96HC4 596 aaKnown RBP3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 CDKN2AIPNLQ96HQ2 116 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 BTBD9Q96Q07 612 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 NACAP1Q9BZK3 213 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 MID1IP1Q9NPA3 183 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 GPR173Q9NS66 373 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 IARS2Q9NSE4 1012 aaKnown RBP3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 WWOXQ9NZC7 414 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 SPG21Q9NZD8 308 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 TRPC4Q9UBN4 977 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 ICAM5Q9UMF0 924 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 AGTPBP1Q9UPW5 1226 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 C2CD2Q9Y426 696 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 GREB1LQ9C091 1923 aaPredicted RBP3.91□□□□□ -1.78
CDC42BPA-211ENST00000466538 SLCO1B7G3V0H7 640 aa3.91□□□□□ -1.78
CDC42BPA-211ENST00000466538 EXTL3O43909 919 aa3.91□□□□□ -1.78
CDC42BPA-211ENST00000466538 ATP9AO75110 1047 aa3.91□□□□□ -1.78
CDC42BPA-211ENST00000466538 AP2A2O94973 939 aa3.91□□□□□ -1.78
CDC42BPA-211ENST00000466538 NGFP01138 241 aa3.91□□□□□ -1.78
CDC42BPA-211ENST00000466538 SP9P0CG40 484 aa3.91□□□□□ -1.78
CDC42BPA-211ENST00000466538 DARSP14868 501 aaKnown RBP3.91□□□□□ -1.78
CDC42BPA-211ENST00000466538 HLA-DPA1P20036 260 aa3.91□□□□□ -1.78
CDC42BPA-211ENST00000466538 SSTR1P30872 391 aa3.91□□□□□ -1.78
CDC42BPA-211ENST00000466538 CDKN1AP38936 164 aa3.91□□□□□ -1.78
CDC42BPA-211ENST00000466538 SGCGQ13326 291 aa3.91□□□□□ -1.78
CDC42BPA-211ENST00000466538 CDC37Q16543 378 aaPredicted RBP3.91□□□□□ -1.78
CDC42BPA-211ENST00000466538 ZNF790Q6PG37 636 aa3.91□□□□□ -1.78
CDC42BPA-211ENST00000466538 PRSS55Q6UWB4 352 aaPredicted RBP3.91□□□□□ -1.78
CDC42BPA-211ENST00000466538 KCTD9Q7L273 389 aa3.91□□□□□ -1.78
CDC42BPA-211ENST00000466538 CPEB2Q7Z5Q1 589 aaKnown RBP3.91□□□□□ -1.78
CDC42BPA-211ENST00000466538 KLHDC8AQ8IYD2 350 aa3.91□□□□□ -1.78
CDC42BPA-211ENST00000466538 CNBD1Q8NA66 436 aa3.91□□□□□ -1.78
CDC42BPA-211ENST00000466538 SUSD6Q92537 303 aa3.91□□□□□ -1.78
CDC42BPA-211ENST00000466538 SENP5Q96HI0 755 aaPredicted RBP3.91□□□□□ -1.78
CDC42BPA-211ENST00000466538 IDI2Q9BXS1 227 aa3.91□□□□□ -1.78
CDC42BPA-211ENST00000466538 SLC5A7Q9GZV3 580 aa3.91□□□□□ -1.78
CDC42BPA-211ENST00000466538 RAVER2Q9HCJ3 691 aaKnown RBP3.91□□□□□ -1.78
CDC42BPA-211ENST00000466538 PHPT1Q9NRX4 125 aaPredicted RBP3.91□□□□□ -1.78
CDC42BPA-211ENST00000466538 C2orf42Q9NWW7 574 aa3.91□□□□□ -1.78
CDC42BPA-211ENST00000466538 COMMD8Q9NX08 183 aa3.91□□□□□ -1.78
CDC42BPA-211ENST00000466538 GMEB2Q9UKD1 530 aa3.91□□□□□ -1.78
CDC42BPA-211ENST00000466538 PRDM4Q9UKN5 801 aa3.91□□□□□ -1.78
CDC42BPA-211ENST00000466538 STX8Q9UNK0 236 aa3.91□□□□□ -1.78
CDC42BPA-211ENST00000466538 PFASO15067 1338 aa3.91□□□□□ -1.78
CDC42BPA-211ENST00000466538 A0A1W2PRV1 198 aa3.9□□□□□ -1.79
CDC42BPA-211ENST00000466538 MSGN1A6NI15 193 aa3.9□□□□□ -1.79
CDC42BPA-211ENST00000466538 PMS2P5A8MQ11 134 aa3.9□□□□□ -1.79
CDC42BPA-211ENST00000466538 KINO60870 393 aaKnown RBP3.9□□□□□ -1.79
CDC42BPA-211ENST00000466538 GLCEO94923 617 aa3.9□□□□□ -1.79
CDC42BPA-211ENST00000466538 NADKO95544 446 aaPredicted RBP3.9□□□□□ -1.79
CDC42BPA-211ENST00000466538 BAG3O95817 575 aa3.9□□□□□ -1.79
CDC42BPA-211ENST00000466538 GPIP06744 558 aa3.9□□□□□ -1.79
CDC42BPA-211ENST00000466538 FAM157CP0CG43 387 aa3.9□□□□□ -1.79
CDC42BPA-211ENST00000466538 CTNNB1P35222 781 aa3.9□□□□□ -1.79
CDC42BPA-211ENST00000466538 OR3A1P47881 315 aa3.9□□□□□ -1.79
CDC42BPA-211ENST00000466538 ARF5P84085 180 aa3.9□□□□□ -1.79
CDC42BPA-211ENST00000466538 AKAP17AQ02040 695 aaKnown RBP3.9□□□□□ -1.79
CDC42BPA-211ENST00000466538 UBXN1Q04323 297 aa3.9□□□□□ -1.79
CDC42BPA-211ENST00000466538 SLC34A1Q06495 639 aa3.9□□□□□ -1.79
CDC42BPA-211ENST00000466538 C17orf67Q0P5P2 114 aa3.9□□□□□ -1.79
CDC42BPA-211ENST00000466538 SQLEQ14534 574 aa3.9□□□□□ -1.79
CDC42BPA-211ENST00000466538 SLC39A12Q504Y0 691 aa3.9□□□□□ -1.79
CDC42BPA-211ENST00000466538 SLC25A53Q5H9E4 307 aa3.9□□□□□ -1.79
CDC42BPA-211ENST00000466538 KLHL10Q6JEL2 608 aa3.9□□□□□ -1.79
CDC42BPA-211ENST00000466538 PODNL1Q6PEZ8 512 aa3.9□□□□□ -1.79
CDC42BPA-211ENST00000466538 PSRC1Q6PGN9 363 aaPredicted RBP3.9□□□□□ -1.79
CDC42BPA-211ENST00000466538 TMEM270Q6UE05 265 aa3.9□□□□□ -1.79
CDC42BPA-211ENST00000466538 CCDC83Q8IWF9 413 aa3.9□□□□□ -1.79
CDC42BPA-211ENST00000466538 GPC2Q8N158 579 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms