RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 SKP1P63208 163 aa21.07■□□□□ 0.96
SRM-201ENST00000376957 FAM53BQ14153 422 aa21.07■□□□□ 0.96
SRM-201ENST00000376957 ZNF460Q14592 562 aa21.07■□□□□ 0.96
SRM-201ENST00000376957 SLMAPQ14BN4 828 aa21.07■□□□□ 0.96
SRM-201ENST00000376957 ATG14Q6ZNE5 492 aa21.07■□□□□ 0.96
SRM-201ENST00000376957 CCDC91Q7Z6B0 441 aa21.07■□□□□ 0.96
SRM-201ENST00000376957 TCAIMQ8N3R3 496 aa21.07■□□□□ 0.96
SRM-201ENST00000376957 MIEF2Q96C03 454 aa21.07■□□□□ 0.96
SRM-201ENST00000376957 PYCR2Q96C36 320 aa21.07■□□□□ 0.96
SRM-201ENST00000376957 MMABQ96EY8 250 aaPredicted RBP21.07■□□□□ 0.96
SRM-201ENST00000376957 CYTH2Q99418 400 aa21.07■□□□□ 0.96
SRM-201ENST00000376957 FMO2Q99518 471 aa21.07■□□□□ 0.96
SRM-201ENST00000376957 CNOT10Q9H9A5 744 aaKnown RBP21.07■□□□□ 0.96
SRM-201ENST00000376957 SEMA3GQ9NS98 782 aa21.07■□□□□ 0.96
SRM-201ENST00000376957 ZDHHC18Q9NUE0 388 aa21.07■□□□□ 0.96
SRM-201ENST00000376957 ANAPC2Q9UJX6 822 aa21.07■□□□□ 0.96
SRM-201ENST00000376957 PCDHGB7Q9Y5F8 929 aa21.07■□□□□ 0.96
SRM-201ENST00000376957 PCDHGA9Q9Y5G4 932 aaKnown RBP21.07■□□□□ 0.96
SRM-201ENST00000376957 ANKRD12Q6UB98 2062 aa21.07■□□□□ 0.96
SRM-201ENST00000376957 COL6A6A6NMZ7 2263 aa21.07■□□□□ 0.96
SRM-201ENST00000376957 PIEZO2Q9H5I5 2752 aa21.06■□□□□ 0.96
SRM-201ENST00000376957 CDC7O00311 574 aa21.06■□□□□ 0.96
SRM-201ENST00000376957 SLC28A2O43868 658 aa21.06■□□□□ 0.96
SRM-201ENST00000376957 SLC35G6P0C7Q6 338 aa21.06■□□□□ 0.96
SRM-201ENST00000376957 CDH1P12830 882 aa21.06■□□□□ 0.96
SRM-201ENST00000376957 MMP11P24347 488 aa21.06■□□□□ 0.96
SRM-201ENST00000376957 CRABP2P29373 138 aa21.06■□□□□ 0.96
SRM-201ENST00000376957 PGDP52209 483 aa21.06■□□□□ 0.96
SRM-201ENST00000376957 PGGT1BP53609 377 aa21.06■□□□□ 0.96
SRM-201ENST00000376957 CSNK1G2P78368 415 aa21.06■□□□□ 0.96
SRM-201ENST00000376957 ATP1A4Q13733 1029 aa21.06■□□□□ 0.96
SRM-201ENST00000376957 NKG7Q16617 165 aa21.06■□□□□ 0.96
SRM-201ENST00000376957 PPP1R3AQ16821 1122 aa21.06■□□□□ 0.96
SRM-201ENST00000376957 HKDC1Q2TB90 917 aa21.06■□□□□ 0.96
SRM-201ENST00000376957 ASB18Q6ZVZ8 466 aa21.06■□□□□ 0.96
SRM-201ENST00000376957 MRGPREQ86SM8 312 aa21.06■□□□□ 0.96
SRM-201ENST00000376957 TBC1D1Q86TI0 1168 aaPredicted RBP21.06■□□□□ 0.96
SRM-201ENST00000376957 SPNS2Q8IVW8 549 aa21.06■□□□□ 0.96
SRM-201ENST00000376957 METTL27Q8N6F8 245 aaPredicted RBP21.06■□□□□ 0.96
SRM-201ENST00000376957 CAPS2Q9BXY5 557 aa21.06■□□□□ 0.96
SRM-201ENST00000376957 CAB39LQ9H9S4 337 aa21.06■□□□□ 0.96
SRM-201ENST00000376957 IKBKGQ9Y6K9 419 aa21.06■□□□□ 0.96
SRM-201ENST00000376957 DSG2Q14126 1118 aa21.05■□□□□ 0.96
SRM-201ENST00000376957 TSNQ15631 228 aaKnown RBP21.05■□□□□ 0.96
SRM-201ENST00000376957 CDKL4Q5MAI5 379 aa21.05■□□□□ 0.96
SRM-201ENST00000376957 FAM69BQ5VUD6 431 aa21.05■□□□□ 0.96
SRM-201ENST00000376957 IRAK1BP1Q5VVH5 260 aa21.05■□□□□ 0.96
SRM-201ENST00000376957 NIPAL1Q6NVV3 410 aa21.05■□□□□ 0.96
SRM-201ENST00000376957 THOC6Q86W42 341 aaKnown RBP21.05■□□□□ 0.96
SRM-201ENST00000376957 GPSM1Q86YR5 675 aa21.05■□□□□ 0.96
SRM-201ENST00000376957 HPS6Q86YV9 775 aa21.05■□□□□ 0.96
SRM-201ENST00000376957 RELL1Q8IUW5 271 aa21.05■□□□□ 0.96
SRM-201ENST00000376957 TEX19Q8NA77 164 aa21.05■□□□□ 0.96
SRM-201ENST00000376957 ABHD11Q8NFV4 315 aa21.05■□□□□ 0.96
SRM-201ENST00000376957 ANKRD49Q8WVL7 239 aa21.05■□□□□ 0.96
SRM-201ENST00000376957 SLC13A3Q8WWT9 602 aa21.05■□□□□ 0.96
SRM-201ENST00000376957 SLC5A11Q8WWX8 675 aa21.05■□□□□ 0.96
SRM-201ENST00000376957 SLC22A11Q9NSA0 550 aa21.05■□□□□ 0.96
SRM-201ENST00000376957 C14orf105Q9NVL8 296 aa21.05■□□□□ 0.96
SRM-201ENST00000376957 P4HTMQ9NXG6 502 aa21.05■□□□□ 0.96
SRM-201ENST00000376957 TRPC4Q9UBN4 977 aa21.05■□□□□ 0.96
SRM-201ENST00000376957 TP53TG5Q9Y2B4 290 aa21.05■□□□□ 0.96
SRM-201ENST00000376957 AGPSO00116 658 aa21.04■□□□□ 0.96
SRM-201ENST00000376957 PCDH17O14917 1159 aa21.04■□□□□ 0.96
SRM-201ENST00000376957 PHGDHO43175 533 aaKnown RBP21.04■□□□□ 0.96
SRM-201ENST00000376957 ALPPP05187 535 aa21.04■□□□□ 0.96
SRM-201ENST00000376957 CXCR2P25025 360 aa21.04■□□□□ 0.96
SRM-201ENST00000376957 SLC26A3P40879 764 aa21.04■□□□□ 0.96
SRM-201ENST00000376957 KLRB1Q12918 225 aa21.04■□□□□ 0.96
SRM-201ENST00000376957 RBBP7Q16576 425 aa21.04■□□□□ 0.96
SRM-201ENST00000376957 ASPGQ86U10 573 aa21.04■□□□□ 0.96
SRM-201ENST00000376957 PLD3Q8IV08 490 aa21.04■□□□□ 0.96
SRM-201ENST00000376957 ZDHHC19Q8WVZ1 309 aaPredicted RBP21.04■□□□□ 0.96
SRM-201ENST00000376957 C10orf90Q96M02 699 aa21.04■□□□□ 0.96
SRM-201ENST00000376957 AIF1LQ9BQI0 150 aa21.04■□□□□ 0.96
SRM-201ENST00000376957 CRB3Q9BUF7 120 aa21.04■□□□□ 0.96
SRM-201ENST00000376957 SOX17Q9H6I2 414 aaPredicted RBP21.04■□□□□ 0.96
SRM-201ENST00000376957 NMRAL1Q9HBL8 299 aa21.04■□□□□ 0.96
SRM-201ENST00000376957 MKKSQ9NPJ1 570 aaPredicted RBP21.04■□□□□ 0.96
SRM-201ENST00000376957 ATP13A2Q9NQ11 1180 aa21.04■□□□□ 0.96
SRM-201ENST00000376957 ZNF451Q9Y4E5 1061 aa21.04■□□□□ 0.96
SRM-201ENST00000376957 MAP4K5Q9Y4K4 846 aa21.04■□□□□ 0.96
SRM-201ENST00000376957 MDC1Q14676 2089 aaKnown RBP21.04■□□□□ 0.96
SRM-201ENST00000376957 TRBC2A0A5B9 178 aa21.03■□□□□ 0.96
SRM-201ENST00000376957 H0YIG0 161 aa21.03■□□□□ 0.96
SRM-201ENST00000376957 SUV39H1O43463 412 aa21.03■□□□□ 0.96
SRM-201ENST00000376957 OR1F1O43749 312 aa21.03■□□□□ 0.96
SRM-201ENST00000376957 H2AFYO75367 372 aaKnown RBP21.03■□□□□ 0.96
SRM-201ENST00000376957 DNAJB5O75953 348 aa21.03■□□□□ 0.96
SRM-201ENST00000376957 IPO13O94829 963 aaKnown RBP21.03■□□□□ 0.96
SRM-201ENST00000376957 ZGLP1P0C6A0 271 aa21.03■□□□□ 0.96
SRM-201ENST00000376957 GNAZP19086 355 aa21.03■□□□□ 0.96
SRM-201ENST00000376957 CHAF1BQ13112 559 aa21.03■□□□□ 0.96
SRM-201ENST00000376957 TGFBIQ15582 683 aa21.03■□□□□ 0.96
SRM-201ENST00000376957 ZKSCAN8Q15776 578 aaPredicted RBP21.03■□□□□ 0.96
SRM-201ENST00000376957 DCAF10Q5QP82 559 aa21.03■□□□□ 0.96
SRM-201ENST00000376957 CPZQ66K79 652 aa21.03■□□□□ 0.96
SRM-201ENST00000376957 TAOK1Q7L7X3 1001 aa21.03■□□□□ 0.96
SRM-201ENST00000376957 PTRH1Q86Y79 214 aaKnown RBP21.03■□□□□ 0.96
SRM-201ENST00000376957 IFT20Q8IY31 132 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms