RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 ZNF687Q8N1G0 1237 aa15.65■□□□□ 0.1
HPS1-202ENST00000338546 HMGB4Q8WW32 186 aa15.65■□□□□ 0.1
HPS1-202ENST00000338546 SH3KBP1Q96B97 665 aa15.65■□□□□ 0.1
HPS1-202ENST00000338546 PRPF18Q99633 342 aaKnown RBP15.65■□□□□ 0.1
HPS1-202ENST00000338546 ZNF184Q99676 751 aaPredicted RBP15.65■□□□□ 0.1
HPS1-202ENST00000338546 KIR3DX1Q9H7L2 352 aa15.65■□□□□ 0.1
HPS1-202ENST00000338546 ARMC1Q9NVT9 282 aa15.65■□□□□ 0.1
HPS1-202ENST00000338546 FAM120CQ9NX05 1096 aaKnown RBP15.65■□□□□ 0.1
HPS1-202ENST00000338546 TRNAU1APQ9NX07 287 aaKnown RBP15.65■□□□□ 0.1
HPS1-202ENST00000338546 AHSPQ9NZD4 102 aa15.65■□□□□ 0.1
HPS1-202ENST00000338546 EBF1Q9UH73 591 aa15.65■□□□□ 0.1
HPS1-202ENST00000338546 MOSPD1Q9UJG1 213 aa15.65■□□□□ 0.1
HPS1-202ENST00000338546 PLAGL1Q9UM63 463 aa15.65■□□□□ 0.1
HPS1-202ENST00000338546 SH2B3Q9UQQ2 575 aa15.65■□□□□ 0.1
HPS1-202ENST00000338546 MRPS17Q9Y2R5 130 aaKnown RBP15.65■□□□□ 0.1
HPS1-202ENST00000338546 WBP11Q9Y2W2 641 aaKnown RBP15.65■□□□□ 0.1
HPS1-202ENST00000338546 AP4S1Q9Y587 144 aa15.65■□□□□ 0.1
HPS1-202ENST00000338546 A0A1W2PPV9 198 aa15.64■□□□□ 0.09
HPS1-202ENST00000338546 PRAMEF26H0Y7S4 382 aa15.64■□□□□ 0.09
HPS1-202ENST00000338546 SEMA3DO95025 777 aa15.64■□□□□ 0.09
HPS1-202ENST00000338546 MTHFD1P11586 935 aaKnown RBP15.64■□□□□ 0.09
HPS1-202ENST00000338546 CDH1P12830 882 aa15.64■□□□□ 0.09
HPS1-202ENST00000338546 RABIFP47224 123 aa15.64■□□□□ 0.09
HPS1-202ENST00000338546 RAE1P78406 368 aaKnown RBP15.64■□□□□ 0.09
HPS1-202ENST00000338546 ABATP80404 500 aa15.64■□□□□ 0.09
HPS1-202ENST00000338546 KRT33BQ14525 404 aa15.64■□□□□ 0.09
HPS1-202ENST00000338546 CLCA4Q14CN2 919 aa15.64■□□□□ 0.09
HPS1-202ENST00000338546 SKIV2LQ15477 1246 aaKnown RBP15.64■□□□□ 0.09
HPS1-202ENST00000338546 RPE65Q16518 533 aa15.64■□□□□ 0.09
HPS1-202ENST00000338546 MTX3Q5HYI7 312 aa15.64■□□□□ 0.09
HPS1-202ENST00000338546 ICE2Q659A1 982 aa15.64■□□□□ 0.09
HPS1-202ENST00000338546 METTL4Q8N3J2 472 aa15.64■□□□□ 0.09
HPS1-202ENST00000338546 TMEM132CQ8N3T6 1108 aa15.64■□□□□ 0.09
HPS1-202ENST00000338546 C1orf52Q8N6N3 182 aaKnown RBP15.64■□□□□ 0.09
HPS1-202ENST00000338546 TMEM145Q8NBT3 493 aa15.64■□□□□ 0.09
HPS1-202ENST00000338546 NAF1Q96HR8 494 aaKnown RBP15.64■□□□□ 0.09
HPS1-202ENST00000338546 KLHL4Q9C0H6 718 aa15.64■□□□□ 0.09
HPS1-202ENST00000338546 IMP3Q9NV31 184 aaKnown RBP15.64■□□□□ 0.09
HPS1-202ENST00000338546 MAGEL2Q9UJ55 1249 aa15.64■□□□□ 0.09
HPS1-202ENST00000338546 NDRG2Q9UN36 371 aaKnown RBP15.64■□□□□ 0.09
HPS1-202ENST00000338546 PCDHB11Q9Y5F2 797 aa15.64■□□□□ 0.09
HPS1-202ENST00000338546 CFAP20Q9Y6A4 193 aaKnown RBP15.64■□□□□ 0.09
HPS1-202ENST00000338546 PDZK1P1A8MUH7 402 aa15.63■□□□□ 0.09
HPS1-202ENST00000338546 ETHE1O95571 254 aa15.63■□□□□ 0.09
HPS1-202ENST00000338546 GPIP06744 558 aa15.63■□□□□ 0.09
HPS1-202ENST00000338546 ANXA4P09525 319 aaPredicted RBP15.63■□□□□ 0.09
HPS1-202ENST00000338546 HRH2P25021 359 aa15.63■□□□□ 0.09
HPS1-202ENST00000338546 GSTM2P28161 218 aa15.63■□□□□ 0.09
HPS1-202ENST00000338546 HPCAL1P37235 193 aa15.63■□□□□ 0.09
HPS1-202ENST00000338546 CLDN2P57739 230 aa15.63■□□□□ 0.09
HPS1-202ENST00000338546 REEP5Q00765 189 aa15.63■□□□□ 0.09
HPS1-202ENST00000338546 PRDX1Q06830 199 aaKnown RBP15.63■□□□□ 0.09
HPS1-202ENST00000338546 OGFRL1Q5TC84 451 aaPredicted RBP15.63■□□□□ 0.09
HPS1-202ENST00000338546 KIAA0895LQ68EN5 471 aa15.63■□□□□ 0.09
HPS1-202ENST00000338546 GCNT7Q6ZNI0 430 aa15.63■□□□□ 0.09
HPS1-202ENST00000338546 ABI3BPQ7Z7G0 1075 aa15.63■□□□□ 0.09
HPS1-202ENST00000338546 RNF175Q8N4F7 328 aa15.63■□□□□ 0.09
HPS1-202ENST00000338546 ADCY4Q8NFM4 1077 aa15.63■□□□□ 0.09
HPS1-202ENST00000338546 TTLQ8NG68 377 aa15.63■□□□□ 0.09
HPS1-202ENST00000338546 CLHC1Q8NHS4 586 aa15.63■□□□□ 0.09
HPS1-202ENST00000338546 OR1E3Q8WZA6 343 aa15.63■□□□□ 0.09
HPS1-202ENST00000338546 PPM1MQ96MI6 270 aa15.63■□□□□ 0.09
HPS1-202ENST00000338546 CCDC115Q96NT0 180 aa15.63■□□□□ 0.09
HPS1-202ENST00000338546 PAIP1Q9H074 479 aaKnown RBP15.63■□□□□ 0.09
HPS1-202ENST00000338546 SERHLQ9NQF3 203 aa15.63■□□□□ 0.09
HPS1-202ENST00000338546 CCM2LQ9NUG4 571 aaPredicted RBP15.63■□□□□ 0.09
HPS1-202ENST00000338546 VAPAQ9P0L0 249 aa15.63■□□□□ 0.09
HPS1-202ENST00000338546 TAC3Q9UHF0 121 aa15.63■□□□□ 0.09
HPS1-202ENST00000338546 RIMS3Q9UJD0 308 aa15.63■□□□□ 0.09
HPS1-202ENST00000338546 DGKBQ9Y6T7 804 aa15.63■□□□□ 0.09
HPS1-202ENST00000338546 ARPC2O15144 300 aa15.62■□□□□ 0.09
HPS1-202ENST00000338546 ZNF217O75362 1048 aa15.62■□□□□ 0.09
HPS1-202ENST00000338546 CCNDBP1O95273 360 aa15.62■□□□□ 0.09
HPS1-202ENST00000338546 PHC1P78364 1004 aa15.62■□□□□ 0.09
HPS1-202ENST00000338546 TRIP10Q15642 601 aa15.62■□□□□ 0.09
HPS1-202ENST00000338546 ANXA8L1Q5VT79 327 aa15.62■□□□□ 0.09
HPS1-202ENST00000338546 PGBD3Q8N328 593 aa15.62■□□□□ 0.09
HPS1-202ENST00000338546 VPS37AQ8NEZ2 397 aa15.62■□□□□ 0.09
HPS1-202ENST00000338546 OR52E4Q8NGH9 312 aa15.62■□□□□ 0.09
HPS1-202ENST00000338546 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.62■□□□□ 0.09
HPS1-202ENST00000338546 NELL1Q92832 810 aa15.62■□□□□ 0.09
HPS1-202ENST00000338546 MTERF3Q96E29 417 aa15.62■□□□□ 0.09
HPS1-202ENST00000338546 GBP5Q96PP8 586 aa15.62■□□□□ 0.09
HPS1-202ENST00000338546 NELL2Q99435 816 aa15.62■□□□□ 0.09
HPS1-202ENST00000338546 MYOCQ99972 504 aa15.62■□□□□ 0.09
HPS1-202ENST00000338546 ECSITQ9BQ95 431 aa15.62■□□□□ 0.09
HPS1-202ENST00000338546 EBPLQ9BY08 206 aa15.62■□□□□ 0.09
HPS1-202ENST00000338546 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.62■□□□□ 0.09
HPS1-202ENST00000338546 MCM8Q9UJA3 840 aa15.62■□□□□ 0.09
HPS1-202ENST00000338546 COLQQ9Y215 455 aaPredicted RBP15.62■□□□□ 0.09
HPS1-202ENST00000338546 PLEKHM1Q9Y4G2 1056 aa15.62■□□□□ 0.09
HPS1-202ENST00000338546 NEUROG3Q9Y4Z2 214 aa15.62■□□□□ 0.09
HPS1-202ENST00000338546 GMEB1Q9Y692 573 aa15.62■□□□□ 0.09
HPS1-202ENST00000338546 ANKDD1BA6NHY2 528 aa15.62■□□□□ 0.09
HPS1-202ENST00000338546 SCAMP2O15127 329 aaKnown RBP15.62■□□□□ 0.09
HPS1-202ENST00000338546 PCDH7O60245 1069 aa15.62■□□□□ 0.09
HPS1-202ENST00000338546 DFNA5O60443 496 aa15.62■□□□□ 0.09
HPS1-202ENST00000338546 COX7A2P14406 83 aa15.62■□□□□ 0.09
HPS1-202ENST00000338546 HOXB9P17482 250 aaPredicted RBP15.62■□□□□ 0.09
HPS1-202ENST00000338546 HOXB6P17509 224 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms