RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 GFM2Q969S9 779 aaKnown RBP16.38■□□□□ 0.21
SSR4-201ENST00000320857 CENPNQ96H22 339 aaPredicted RBP16.38■□□□□ 0.21
SSR4-201ENST00000320857 IL17FQ96PD4 163 aa16.38■□□□□ 0.21
SSR4-201ENST00000320857 PCBD2Q9H0N5 130 aa16.38■□□□□ 0.21
SSR4-201ENST00000320857 GORASP2Q9H8Y8 452 aa16.38■□□□□ 0.21
SSR4-201ENST00000320857 DMRT3Q9NQL9 472 aa16.38■□□□□ 0.21
SSR4-201ENST00000320857 AGPAT4Q9NRZ5 378 aa16.38■□□□□ 0.21
SSR4-201ENST00000320857 SIRT5Q9NXA8 310 aa16.38■□□□□ 0.21
SSR4-201ENST00000320857 PLAGL1Q9UM63 463 aa16.38■□□□□ 0.21
SSR4-201ENST00000320857 SH2B3Q9UQQ2 575 aa16.38■□□□□ 0.21
SSR4-201ENST00000320857 NCKAP1Q9Y2A7 1128 aa16.38■□□□□ 0.21
SSR4-201ENST00000320857 PIAS3Q9Y6X2 628 aa16.38■□□□□ 0.21
SSR4-201ENST00000320857 BRWD1Q9NSI6 2320 aa16.38■□□□□ 0.21
SSR4-201ENST00000320857 A0A1W2PQF6 199 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 ELOVL7A1L3X0 281 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 FAM220BPB1ANY3 271 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 SCELO95171 688 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 ETHE1O95571 254 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 ANXA4P09525 319 aaPredicted RBP16.37■□□□□ 0.21
SSR4-201ENST00000320857 CDH1P12830 882 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 TIA1P31483 386 aaKnown RBP eCLIP16.37■□□□□ 0.21
SSR4-201ENST00000320857 HPCAL1P37235 193 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 PIK3CBP42338 1070 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 CLCNKAP51800 687 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 RAE1P78406 368 aaKnown RBP16.37■□□□□ 0.21
SSR4-201ENST00000320857 MRPS21P82921 87 aaKnown RBP16.37■□□□□ 0.21
SSR4-201ENST00000320857 PDK3Q15120 406 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 UGT8Q16880 541 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 GTDC1Q4AE62 458 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 GALNT18Q6P9A2 607 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 LPCAT2Q7L5N7 544 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 ANKRD46Q86W74 232 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 SLC44A3Q8N4M1 653 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 PACRGLQ8N7B6 248 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 ZNF548Q8NEK5 533 aaPredicted RBP16.37■□□□□ 0.21
SSR4-201ENST00000320857 OR8J2Q8NGG1 315 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 CDC26Q8NHZ8 85 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 POP5Q969H6 163 aaKnown RBP16.37■□□□□ 0.21
SSR4-201ENST00000320857 FAM120BQ96EK7 910 aaKnown RBP16.37■□□□□ 0.21
SSR4-201ENST00000320857 PRPF18Q99633 342 aaKnown RBP16.37■□□□□ 0.21
SSR4-201ENST00000320857 INPP5KQ9BT40 448 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 REXO4Q9GZR2 422 aaKnown RBP16.37■□□□□ 0.21
SSR4-201ENST00000320857 C8orf4Q9NR00 106 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 FZD4Q9ULV1 537 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 AP4B1Q9Y6B7 739 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 TRPM6Q9BX84 2022 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 COL6A3P12111 3177 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 TBC1D3DA0A087WVF3 549 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 TBC1D3IA0A087WXS9 549 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 TBC1D3EA0A087X179 549 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 TBC1D3KA0A087X1G2 549 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 TBC1D3FA6NER0 549 aaPredicted RBP16.37■□□□□ 0.21
SSR4-201ENST00000320857 TBC1D3LB9A6J9 549 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 SCAMP2O15127 329 aaKnown RBP16.37■□□□□ 0.21
SSR4-201ENST00000320857 MBTPS2O43462 519 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 SMNDC1O75940 238 aaKnown RBP eCLIP16.37■□□□□ 0.21
SSR4-201ENST00000320857 TBC1D3HP0C7X1 549 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 ACP5P13686 325 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 HOXB9P17482 250 aaPredicted RBP16.37■□□□□ 0.21
SSR4-201ENST00000320857 COL9A1P20849 921 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 IGFALSP35858 605 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 PRKCQQ04759 706 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 TBC1D3GQ6DHY5 549 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 CAPRIN2Q6IMN6 1127 aaKnown RBP16.37■□□□□ 0.21
SSR4-201ENST00000320857 TBC1D3CQ6IPX1 549 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 ADNP2Q6IQ32 1131 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 ZBTB49Q6ZSB9 765 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 CHST15Q7LFX5 561 aaPredicted RBP16.37■□□□□ 0.21
SSR4-201ENST00000320857 C17orf64Q86WR6 236 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 MICU2Q8IYU8 434 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 TBC1D3Q8IZP1 549 aaPredicted RBP16.37■□□□□ 0.21
SSR4-201ENST00000320857 LMNTD1Q8N9Z9 388 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 OR7A2PQ8NGA2 310 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 ASB12Q8WXK4 309 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 SIPA1Q96FS4 1042 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 ZNF597Q96LX8 424 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 IKZF5Q9H5V7 419 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 KAT8Q9H7Z6 458 aaKnown RBP16.37■□□□□ 0.21
SSR4-201ENST00000320857 PELI2Q9HAT8 420 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 KCNK12Q9HB15 430 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 DLGAP2Q9P1A6 1054 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 ADGRE2Q9UHX3 823 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 SLC17A4Q9Y2C5 497 aa16.37■□□□□ 0.21
SSR4-201ENST00000320857 ATG2BQ96BY7 2078 aa16.36■□□□□ 0.21
SSR4-201ENST00000320857 A6NHS1 94 aa16.36■□□□□ 0.21
SSR4-201ENST00000320857 CACNB4O00305 520 aaPredicted RBP16.36■□□□□ 0.21
SSR4-201ENST00000320857 PCDH7O60245 1069 aa16.36■□□□□ 0.21
SSR4-201ENST00000320857 TPST1O60507 370 aa16.36■□□□□ 0.21
SSR4-201ENST00000320857 CXCR2P25025 360 aa16.36■□□□□ 0.21
SSR4-201ENST00000320857 ATP6AP1Q15904 470 aa16.36■□□□□ 0.21
SSR4-201ENST00000320857 FAM98BQ52LJ0 330 aaKnown RBP16.36■□□□□ 0.21
SSR4-201ENST00000320857 INTS11Q5TA45 600 aaKnown RBP16.36■□□□□ 0.21
SSR4-201ENST00000320857 CPTPQ5TA50 214 aa16.36■□□□□ 0.21
SSR4-201ENST00000320857 ANXA8L1Q5VT79 327 aa16.36■□□□□ 0.21
SSR4-201ENST00000320857 PPP4R4Q6NUP7 873 aa16.36■□□□□ 0.21
SSR4-201ENST00000320857 GCNT7Q6ZNI0 430 aa16.36■□□□□ 0.21
SSR4-201ENST00000320857 USP30Q70CQ3 517 aa16.36■□□□□ 0.21
SSR4-201ENST00000320857 CALHM3Q86XJ0 350 aa16.36■□□□□ 0.21
SSR4-201ENST00000320857 APLFQ8IW19 511 aaPredicted RBP16.36■□□□□ 0.21
SSR4-201ENST00000320857 GPR156Q8NFN8 814 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms