RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Cyp2j9Q924D1 502 aa10□□□□□ -0.81
Lig4-201ENSMUST00000095476 Ccdc107Q9DCC3 242 aa10□□□□□ -0.81
Lig4-201ENSMUST00000095476 Tmem176aQ9DCS1 244 aa10□□□□□ -0.81
Lig4-201ENSMUST00000095476 Tgm1Q9JLF6 815 aa10□□□□□ -0.81
Lig4-201ENSMUST00000095476 TsnaxQ9QZE7 290 aaKnown RBP10□□□□□ -0.81
Lig4-201ENSMUST00000095476 Gm4756A0A140LIS8 335 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Sppl2cA2A6C4 690 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Vmn2r93L7N1Z9 857 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Ubl4aP21126 157 aaKnown RBP9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Tcea3P23881 347 aaKnown RBP9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Ruvbl1P60122 456 aaKnown RBP9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Mgat3Q10470 538 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Ano7Q14AT5 859 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Cdk10Q3UMM4 360 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Fzd4Q61088 537 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 DazlQ64368 298 aaKnown RBP9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Acat3Q80X81 397 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Pomt2Q8BGQ4 820 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Slc26a9Q8BU91 790 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Tor1aip2Q8BYU6 502 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Gpr22Q8BZL4 432 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Slco4a1Q8K078 723 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Vmn1r203Q8R273 311 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Blzf1Q8R2X8 403 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Olfr691Q8VGW5 322 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Q9D5Y0 588 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Slc38a3Q9DCP2 505 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 IkbkeQ9R0T8 717 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Ddx60E9PZQ1 1711 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Col14a1Q80X19 1797 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Gm6803J3QPI8 144 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 CntfP51642 198 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Mc1rQ01727 315 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 MitfQ08874 526 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 H2-M3Q31093 336 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Klhdc9Q3USL1 350 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Brsk1Q5RJI5 778 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 G2e3Q5RJY2 716 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Cfap97Q6ZPR1 541 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Ctxn3Q8BXZ0 80 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Znf276Q8CE64 614 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Slc51aQ8R000 340 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Slc29a4Q8R139 528 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Vmn1r215Q8R264 300 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Tcf25Q8R3L2 676 aaKnown RBP9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Olfr1487Q8VFQ6 315 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Olfr818Q8VG46 318 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Olfr1250Q8VGM3 314 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Col25a1Q99MQ5 666 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Ing5Q9D8Y8 240 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 PplQ9R269 1755 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Xpnpep3B7ZMP1 506 aaKnown RBP9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Coq10aE9Q3H6 259 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Olfr172E9Q8F6 309 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Cd2P08920 344 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Zfp14P10755 501 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Fgl2P12804 432 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Pdss2Q33DR3 401 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Ap5b1Q3TAP4 876 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Scrn3Q3TMH2 418 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Tmem102Q3UPR7 509 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Rnase12Q5GAM8 145 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Fbxw11Q5SRY7 542 aaKnown RBP9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Znf354aQ61751 572 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Znf786Q8BV42 777 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Asb14Q8C6Y6 587 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Cdc123Q8CII2 336 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Zbtb20Q8K0L9 741 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Atat1Q8K341 421 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Cys1Q8R4T1 145 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Uhrf1Q8VDF2 782 aaKnown RBP9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Cxxc5Q91WA4 317 aaKnown RBP9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 PdgfdQ925I7 370 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Cryl1Q99KP3 319 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Bcl7aQ9CXE2 210 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Pmepa1Q9D7R2 260 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 2010109A12RikQ9D875 119 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Tmem174Q9DCX7 243 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Dclre1aQ9JIC3 1026 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Acot2Q9QYR9 453 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Usp21Q9QZL6 566 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Col3a1P08121 1464 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 NktrP30415 1453 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Prdm13E9PZZ1 754 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Gm3327F7C9A1 213 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Gm6356L7N2A7 188 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Hoxb6P09023 224 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 StomP54116 284 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Anxa4P97429 319 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Nxpe2Q3U095 558 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Kir3dl2Q673W2 388 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Oog2Q7TPX8 476 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Oscp1Q8BHW2 379 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Ugt2b35Q8BJL9 529 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 SowahaQ8BLS7 548 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Grsf1Q8C5Q4 479 aaKnown RBP9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Mterf1aQ8CHZ9 379 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Scara5Q8K299 491 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 HopxQ8R1H0 73 aa9.99□□□□□ -0.81
Lig4-201ENSMUST00000095476 Plekhh3Q8VCE9 796 aa9.99□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 26.8 ms