RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Nipal2Q91WC7 383 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Psat1Q99K85 370 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Gkn2Q9CQS6 184 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Mri1Q9CQT1 369 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Ndufv2Q9D6J6 248 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Fam13cQ9DBR2 601 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Wdr54Q9R0D8 334 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Kif26aQ52KG5 1881 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Nlrp1bA1Z198 1177 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Gm13088A2AGW6 460 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Fam46dB1ATX6 390 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 BC049352E9Q2Z6 85 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Vmn1r25H3BLP0 302 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Gm3248K7N721 186 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Mkln1O89050 735 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Serpina3cP29621 417 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Spata6Q3U6K5 488 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Ankrd42Q3V096 527 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Aldh16a1Q571I9 802 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Hist2h2acQ64523 129 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Galnt2Q6PB93 570 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Olfr538Q7TRT5 310 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Reep1Q8BGH4 201 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Tusc3Q8BTV1 347 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Cdc16Q8R349 620 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Scpep1Q920A5 452 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 EtfdhQ921G7 616 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Yif1bQ9CX30 311 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Rnf181Q9CY62 165 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Serpinb1aQ9D154 379 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Zdhhc21Q9D270 265 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 1700034I23RikQ9D9Q3 184 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Olfr704Q9EPF6 315 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Slc19a2Q9EQN9 498 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Tcf7l1Q9Z1J1 584 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Plin4O88492 1403 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 PcntP48725 2898 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Gm4969D3YZT1 566 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Ccnb1ip1D3Z3K2 276 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Gm17093F6XGJ4 214 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Ptch2O35595 1182 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Slc32a1O35633 525 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Surf2P09926 257 aaKnown RBP9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Stfa3P35173 103 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Gfi1P70338 423 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 CkbQ04447 381 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 D13Ertd608eQ3UPR8 151 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Myo1dQ5SYD0 1006 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Trim36Q80WG7 729 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Tmem184bQ8BG09 407 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Scn3bQ8BHK2 215 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Ctdsp2Q8BX07 270 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 P3h2Q8CG71 703 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Cnot3Q8K0V4 751 aaKnown RBP9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Olfr345Q8VGK4 311 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Recql5Q8VID5 982 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Q9CPZ3 230 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Klhl28Q9CR40 571 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Ndufs3Q9DCT2 263 aaKnown RBP9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 AicdaQ9WVE0 198 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Znf318Q99PP2 2237 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Pappa2E9PZ87 1789 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Gm5565A0A0G2JGB2 317 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 4930595M18RikA2RRY9 829 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Gm9857F7CXR1 130 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Vmn2r3H3BJ88 915 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 1700122O11RikJ3QPW6 241 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Rrm2P11157 390 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Aldh1a1P24549 501 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Epb42P49222 691 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Dnaja1P63037 397 aaKnown RBP9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 A1bgQ19LI2 512 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Pdss2Q33DR3 401 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 C2cd4cC2CD4Q5HZI2 419 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Dlgap3Q6PFD5 977 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Pcdh8Q7TSK3 1070 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Mup21Q80YX8 181 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 1700001J03RikQ80ZR8 219 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 SgtaQ8BJU0 315 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Tmem221Q8K071 230 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Slc15a4Q91W98 574 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Chst15Q91XQ5 561 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Kdelr2Q9CQM2 212 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Dppa5aQ9CQS7 118 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Tmed11Q9D2R4 215 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Cyp2c55Q9D816 490 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Pop5Q9DB28 169 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 FancgQ9EQR6 623 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Clca3a1Q9QX15 902 aa9.5□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Sult2a7A0A1B0GRF0 313 aa9.49□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Zfp738B8JJX8 793 aa9.49□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Gm3159K7N760 267 aa9.49□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Csf2rbP26955 896 aa9.49□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Ptger4P32240 513 aa9.49□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Samd12Q0VE29 161 aa9.49□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Syndig1lQ3USQ7 237 aa9.49□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Zfp868Q3UTQ6 422 aa9.49□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Ephx3Q3V1F8 367 aa9.49□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Cdh12Q5RJH3 794 aa9.49□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Fstl1Q62356 306 aa9.49□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms