RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Olfr729Q8VET4 323 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Olfr345Q8VGK4 311 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Ptov1Q91VU8 416 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Tcam1Q99NB3 548 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Ska1Q9CPV1 254 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Ttc9bQ9D6E4 239 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Slc5a3Q9JKZ2 718 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Vmn2r8L7N472 848 aa15.74■□□□□ 0.11
Trim28-201ENSMUST00000005705 MaffO54791 156 aa15.74■□□□□ 0.11
Trim28-201ENSMUST00000005705 Hnf1bP27889 558 aa15.74■□□□□ 0.11
Trim28-201ENSMUST00000005705 Chsy3Q5DTK1 884 aa15.74■□□□□ 0.11
Trim28-201ENSMUST00000005705 Egfl8Q6GUQ1 293 aa15.74■□□□□ 0.11
Trim28-201ENSMUST00000005705 Pik3c3Q6PF93 887 aa15.74■□□□□ 0.11
Trim28-201ENSMUST00000005705 Rsbn1Q80T69 795 aa15.74■□□□□ 0.11
Trim28-201ENSMUST00000005705 Ckap4Q8BMK4 575 aaKnown RBP15.74■□□□□ 0.11
Trim28-201ENSMUST00000005705 Thap1Q8CHW1 210 aa15.74■□□□□ 0.11
Trim28-201ENSMUST00000005705 GabrpQ8QZW7 440 aa15.74■□□□□ 0.11
Trim28-201ENSMUST00000005705 Spred2Q924S7 410 aa15.74■□□□□ 0.11
Trim28-201ENSMUST00000005705 Cmtm7Q9ESD6 167 aa15.74■□□□□ 0.11
Trim28-201ENSMUST00000005705 Prmt1Q9JIF0 371 aa15.74■□□□□ 0.11
Trim28-201ENSMUST00000005705 Wdr81Q5ND34 1934 aa15.74■□□□□ 0.11
Trim28-201ENSMUST00000005705 Gm6356L7N2A7 188 aa15.74■□□□□ 0.11
Trim28-201ENSMUST00000005705 Vmn1r31L7N2F1 303 aa15.74■□□□□ 0.11
Trim28-201ENSMUST00000005705 Ncam2O35136 837 aa15.74■□□□□ 0.11
Trim28-201ENSMUST00000005705 Vti1bO88384 232 aa15.74■□□□□ 0.11
Trim28-201ENSMUST00000005705 Cd160O88875 185 aa15.74■□□□□ 0.11
Trim28-201ENSMUST00000005705 MndaP0DOV1 425 aa15.74■□□□□ 0.11
Trim28-201ENSMUST00000005705 Id2P41136 134 aa15.74■□□□□ 0.11
Trim28-201ENSMUST00000005705 Arhgap39P59281 1107 aa15.74■□□□□ 0.11
Trim28-201ENSMUST00000005705 Emx2Q04744 253 aa15.74■□□□□ 0.11
Trim28-201ENSMUST00000005705 Olfr1015Q7TR94 312 aa15.74■□□□□ 0.11
Trim28-201ENSMUST00000005705 Fastkd3Q8BSN9 661 aa15.74■□□□□ 0.11
Trim28-201ENSMUST00000005705 Ilf2Q9CXY6 390 aaKnown RBP15.74■□□□□ 0.11
Trim28-201ENSMUST00000005705 Nif3l1Q9EQ80 376 aa15.74■□□□□ 0.11
Trim28-201ENSMUST00000005705 EefsecQ9JHW4 583 aa15.74■□□□□ 0.11
Trim28-201ENSMUST00000005705 Kcne5Q9QZ26 143 aa15.74■□□□□ 0.11
Trim28-201ENSMUST00000005705 Fam46dB1ATX6 390 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 4930402K13RikB1AW18 415 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 Clk3O35492 638 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 Znf143O70230 638 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 Rab12P35283 243 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 March5Q3KNM2 278 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 Hist2h2acQ64523 129 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 Olfr1036Q7TR85 310 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 A730061H03RikQ8BGD2 154 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 Mthfd1Q922D8 935 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 Plpp3Q99JY8 312 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 Wdr55Q9CX97 388 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 PyurfQ9D1C3 112 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 Glod5Q9D8I3 148 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 TesclQ9DAJ7 231 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 Vnn3Q9QZ25 500 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 Kcnk1O08581 336 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 MlxO08609 298 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 Tssk2O54863 358 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 SqleP52019 572 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 Scn1bP97952 218 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 MthfsdQ3URQ7 372 aaKnown RBP15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 Laptm4aQ60961 233 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 Sim1Q61045 765 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 Acad9Q8JZN5 625 aaKnown RBP15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 Slc8a2Q8K596 921 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 SarafQ8R3Q0 334 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 Olfr606Q8VGZ8 319 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 ArhgdiaQ99PT1 204 aaKnown RBP15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 Ubqln5Q9D4I8 510 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 RtcAQ9D7H3 366 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 Elf4Q9Z2U4 655 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 Ascc3E9PZJ8 2198 aaKnown RBP15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 Gm16494E9Q2Z4 87 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 Gm17093F6XGJ4 214 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 Gm3696K7N751 203 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 Slc19a1P41438 512 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 Cxcr5Q04683 374 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 GcgrQ61606 485 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 Cdh24Q6PFX6 781 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 Itln1bQ80ZA0 313 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 PgghgQ8BP56 690 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 Arhgap12Q8C0D4 838 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 Dnajc27Q8CFP6 273 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 Bdh2Q8JZV9 245 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 Gprc6aQ8K4Z6 928 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 Cdt1Q8R4E9 557 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 Tmem30aQ8VEK0 364 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 Acsl6Q91WC3 697 aa15.73■□□□□ 0.11
Trim28-201ENSMUST00000005705 Fbxo47A2A6H3 451 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Gml2G5E8L7 176 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Npc1O35604 1277 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Gnpda1O88958 289 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 P01636 108 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Fcgr2P08101 330 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 FesP16879 822 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Gbx1P82976 418 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 GaltQ03249 379 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Cmpk2Q3U5Q7 447 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Vwa2Q70UZ7 791 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Fbxo30Q8BJL1 746 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 PigzQ8BTP0 560 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Acsm1Q91VA0 573 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Prl7c1Q9CRB5 251 aa15.72■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 84.8 ms