RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 TMEM211Q6ICI0 200 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 ENPP7Q6UWV6 458 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 SEPT14Q6ZU15 432 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 ECHDC2Q86YB7 292 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 LRRC49Q8IUZ0 686 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 PSTKQ8IV42 348 aaKnown RBP1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 ZC3H3Q8IXZ2 948 aaKnown RBP1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 PLD5Q8N7P1 536 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 LRRC57Q8N9N7 239 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 TC2NQ8N9U0 490 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 TDRD5Q8NAT2 981 aaKnown RBP1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 OSR1Q8TAX0 266 aaPredicted RBP1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 SUSD6Q92537 303 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 N4BP2L2Q92802 583 aaPredicted RBP1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 FBXL8Q96CD0 374 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 TMCO6Q96DC7 493 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 SFXN2Q96NB2 322 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 LXNQ9BS40 222 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 PRSS22Q9GZN4 317 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 CDT1Q9H211 546 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 FBXO44Q9H4M3 255 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 CLMPQ9H6B4 373 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 LTB4R2Q9NPC1 389 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 ANO10Q9NW15 660 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 UTP6Q9NYH9 597 aaKnown RBP1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 PLK2Q9NYY3 685 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 SCML1Q9UN30 329 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 ICKQ9UPZ9 632 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 AURKCQ9UQB9 309 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 LSM4Q9Y4Z0 139 aaKnown RBP1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 GAGE12JA6NER3 117 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 ARHGAP42A6NI28 874 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 FOXO6A8MYZ6 492 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 J3QKU1 62 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 TP73O15350 636 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 ZW10O43264 779 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 SPRY2O43597 315 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 DFNA5O60443 496 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 CTSAP10619 480 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 ETFAP13804 333 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 ITGAXP20702 1163 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 HOXC13P31276 330 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 CCKARP32238 428 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 GJC1P36383 396 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 CDKN2AP42771 156 aaKnown RBP1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 MVDP53602 400 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 PMS2P54278 862 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 ECT2LQ008S8 904 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 RPA4Q13156 261 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 FGFBP1Q14512 234 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 IRF3Q14653 427 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 RNPS1Q15287 305 aaKnown RBP1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 ANGPT1Q15389 498 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 ADIPOQQ15848 244 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 MEP1AQ16819 746 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 SGSM1Q2NKQ1 1148 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 USH1GQ495M9 461 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 GLRA4Q5JXX5 417 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 LIN9Q5TKA1 542 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 ZNF658Q5TYW1 1059 aaPredicted RBP1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 IGFL4Q6B9Z1 124 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 MYOCDQ8IZQ8 938 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 GPD1LQ8N335 351 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 ARL6IP6Q8N6S5 226 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 SCCPDHQ8NBX0 429 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 OR8H1Q8NGG4 311 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 SYN2Q92777 582 aaPredicted RBP1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 TRMT61AQ96FX7 289 aaKnown RBP1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 DUX5Q96PT3 197 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 GAL3ST4Q96RP7 486 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 MCCC1Q96RQ3 725 aaPredicted RBP1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 FRMD8P1Q9BZ68 369 aaPredicted RBP1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 NACA2Q9H009 215 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 HIPK2Q9H2X6 1198 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 KCNK9Q9NPC2 374 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 MRPL17Q9NRX2 175 aaKnown RBP1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 SAMSN1Q9NSI8 373 aaKnown RBP1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 INTS10Q9NVR2 710 aaKnown RBP1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 CDH9Q9ULB4 789 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 ZNF292O60281 2723 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 MYH9P35579 1960 aaKnown RBP1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 TTC28Q96AY4 2481 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 REV3LO60673 3130 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 TRANK1O15050 2925 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 CACNA1BQ00975 2339 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 PTPRJQ12913 1337 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 CHD6Q8TD26 2715 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 KANSL1LA0AUZ9 987 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 OR6C76A6NM76 312 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 LINC00473A8K010 186 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 AGAP14A8MT82 685 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 ZNF487B1APH4 448 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 PRSS44E7EML9 344 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 SMAD9O15198 467 aaKnown RBP1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 KCNAB3O43448 404 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 ITM2AO43736 263 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 KLHL41O60662 606 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 MAGEC1O60732 1142 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 PAGE4O60829 102 aa1.87□□□□□ -2.11
SMCHD1-211ENST00000584897 MITFO75030 526 aaPredicted RBP1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms