RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 TRAPPC9Q96Q05 1148 aa11.03□□□□□ -0.64
KARS-207ENST00000566560 TMEM237Q96Q45 408 aa11.03□□□□□ -0.64
KARS-207ENST00000566560 CMKLR1Q99788 373 aa11.03□□□□□ -0.64
KARS-207ENST00000566560 DPH7Q9BTV6 452 aa11.03□□□□□ -0.64
KARS-207ENST00000566560 ERVK-6Q9BXR3 956 aa11.03□□□□□ -0.64
KARS-207ENST00000566560 KCNK9Q9NPC2 374 aa11.03□□□□□ -0.64
KARS-207ENST00000566560 GPRC5BQ9NZH0 403 aa11.03□□□□□ -0.64
KARS-207ENST00000566560 SEMA5BQ9P283 1151 aa11.03□□□□□ -0.64
KARS-207ENST00000566560 ANKMY1Q9P2S6 941 aa11.03□□□□□ -0.64
KARS-207ENST00000566560 COPG2Q9UBF2 871 aa11.03□□□□□ -0.64
KARS-207ENST00000566560 BTRCQ9Y297 605 aa11.03□□□□□ -0.64
KARS-207ENST00000566560 LOXL2Q9Y4K0 774 aa11.03□□□□□ -0.64
KARS-207ENST00000566560 ANGPTL3Q9Y5C1 460 aa11.03□□□□□ -0.64
KARS-207ENST00000566560 KCNE2Q9Y6J6 123 aa11.03□□□□□ -0.64
KARS-207ENST00000566560 MDC1Q14676 2089 aaKnown RBP11.02□□□□□ -0.64
KARS-207ENST00000566560 CACNA1AO00555 2505 aa11.02□□□□□ -0.64
KARS-207ENST00000566560 CCDC187A0A096LP49 1063 aa11.02□□□□□ -0.65
KARS-207ENST00000566560 IGKV1-8A0A0C4DH67 115 aa11.02□□□□□ -0.65
KARS-207ENST00000566560 TMEM120BA0PK00 339 aa11.02□□□□□ -0.65
KARS-207ENST00000566560 E7EQ34 232 aa11.02□□□□□ -0.65
KARS-207ENST00000566560 HYAL3O43820 417 aaPredicted RBP11.02□□□□□ -0.65
KARS-207ENST00000566560 NRP2O60462 931 aa11.02□□□□□ -0.65
KARS-207ENST00000566560 CPA3P15088 417 aa11.02□□□□□ -0.65
KARS-207ENST00000566560 NPPBP16860 134 aa11.02□□□□□ -0.65
KARS-207ENST00000566560 NELFEP18615 380 aaKnown RBP11.02□□□□□ -0.65
KARS-207ENST00000566560 HPDP32754 393 aaPredicted RBP11.02□□□□□ -0.65
KARS-207ENST00000566560 GRIA3P42263 894 aa11.02□□□□□ -0.65
KARS-207ENST00000566560 PRKAA2P54646 552 aa11.02□□□□□ -0.65
KARS-207ENST00000566560 HSD11B2P80365 405 aa11.02□□□□□ -0.65
KARS-207ENST00000566560 TARDBPQ13148 414 aaKnown RBP eCLIP11.02□□□□□ -0.65
KARS-207ENST00000566560 EIF3IQ13347 325 aaKnown RBP11.02□□□□□ -0.65
KARS-207ENST00000566560 KCNAB1Q14722 419 aa11.02□□□□□ -0.65
KARS-207ENST00000566560 ZIC1Q15915 447 aa11.02□□□□□ -0.65
KARS-207ENST00000566560 DEFB110Q30KQ9 67 aa11.02□□□□□ -0.65
KARS-207ENST00000566560 C3orf38Q5JPI3 329 aa11.02□□□□□ -0.65
KARS-207ENST00000566560 METTL2BQ6P1Q9 378 aaKnown RBP11.02□□□□□ -0.65
KARS-207ENST00000566560 TMPRSS7Q7RTY8 843 aa11.02□□□□□ -0.65
KARS-207ENST00000566560 GOLGA7Q7Z5G4 137 aa11.02□□□□□ -0.65
KARS-207ENST00000566560 MARCH9Q86YJ5 346 aa11.02□□□□□ -0.65
KARS-207ENST00000566560 CACTIN-AS1Q8N1I8 211 aa11.02□□□□□ -0.65
KARS-207ENST00000566560 TEX9Q8N6V9 391 aa11.02□□□□□ -0.65
KARS-207ENST00000566560 ANKRD42Q8N9B4 389 aa11.02□□□□□ -0.65
KARS-207ENST00000566560 KLHL6Q8WZ60 621 aa11.02□□□□□ -0.65
KARS-207ENST00000566560 NEIL2Q969S2 332 aa11.02□□□□□ -0.65
KARS-207ENST00000566560 TCTN2Q96GX1 697 aa11.02□□□□□ -0.65
KARS-207ENST00000566560 PDE7BQ9NP56 450 aa11.02□□□□□ -0.65
KARS-207ENST00000566560 PCTPQ9UKL6 214 aa11.02□□□□□ -0.65
KARS-207ENST00000566560 KLK4Q9Y5K2 254 aa11.02□□□□□ -0.65
KARS-207ENST00000566560 OR2A25A4D2G3 310 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 EFCAB7A8K855 629 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 H7BY64 318 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 E2F3O00716 465 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 CLGNO14967 610 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 ATP8B1O43520 1251 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 PRAMEF10O60809 474 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 KATNA1O75449 491 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 JMJD7P0C870 316 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 EBLN1P0CF75 366 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 HGFP14210 728 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 EZRP15311 586 aaKnown RBP11.01□□□□□ -0.65
KARS-207ENST00000566560 EPB42P16452 691 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 GNAZP19086 355 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 HRH2P25021 359 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 ARL1P40616 181 aaPredicted RBP11.01□□□□□ -0.65
KARS-207ENST00000566560 ETV4P43268 484 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 CCR8P51685 355 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 CYP4F3Q08477 520 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 TUBB3Q13509 450 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 GTF2H2Q13888 395 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 HSP90B2PQ58FF3 399 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 CATSPEREQ5SY80 951 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 TMTC4Q5T4D3 741 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 LIPMQ5VYY2 423 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 FCRL6Q6DN72 434 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 ZNF425Q6IV72 752 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 GTF2H2CQ6P1K8 395 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 FIGLAQ6QHK4 219 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 RNF44Q7L0R7 432 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 RAB11FIP2Q7L804 512 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 PAQR7Q86WK9 346 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 C10orf107Q8IVU9 208 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 D2HGDHQ8N465 521 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 SNIP1Q8TAD8 396 aaKnown RBP11.01□□□□□ -0.65
KARS-207ENST00000566560 PPP4R1Q8TF05 950 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 ZNF483Q8TF39 744 aaPredicted RBP11.01□□□□□ -0.65
KARS-207ENST00000566560 SREK1Q8WXA9 508 aaKnown RBP11.01□□□□□ -0.65
KARS-207ENST00000566560 ZUFSPQ96AP4 578 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 L3HYPDHQ96EM0 354 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 PRAP1Q96NZ9 151 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 NSUN5Q96P11 429 aaKnown RBP11.01□□□□□ -0.65
KARS-207ENST00000566560 PLCD4Q9BRC7 762 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 MECRQ9BV79 373 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 C1QTNF3Q9BXJ4 246 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 CAPS2Q9BXY5 557 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 PELI2Q9HAT8 420 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 FANCEQ9HB96 536 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 MLXIPLQ9NP71 852 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 OXSMQ9NWU1 459 aa11.01□□□□□ -0.65
KARS-207ENST00000566560 SIDT1Q9NXL6 827 aaKnown RBP11.01□□□□□ -0.65
KARS-207ENST00000566560 NKIRAS1Q9NYS0 192 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 240.5 ms