RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 IL12RB1P42701 662 aa14.61□□□□□ -0.07
USP47-207ENST00000527733 KHKP50053 298 aa14.61□□□□□ -0.07
USP47-207ENST00000527733 DIO3P55073 304 aa14.61□□□□□ -0.07
USP47-207ENST00000527733 NR1D2Q14995 579 aa14.61□□□□□ -0.07
USP47-207ENST00000527733 TYW3Q6IPR3 259 aaKnown RBP14.61□□□□□ -0.07
USP47-207ENST00000527733 ZFRQ96KR1 1074 aaKnown RBP14.61□□□□□ -0.07
USP47-207ENST00000527733 SPATA7Q9P0W8 599 aa14.61□□□□□ -0.07
USP47-207ENST00000527733 IKZF3Q9UKT9 509 aa14.61□□□□□ -0.07
USP47-207ENST00000527733 MATN4O95460 622 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 STATHP02808 62 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 THEGLP0DJG4 465 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 JUPP14923 745 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 PIK3CBP42338 1070 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 TRAP1Q12931 704 aaKnown RBP14.6□□□□□ -0.07
USP47-207ENST00000527733 TMED1Q13445 227 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 TOP3AQ13472 1001 aaPredicted RBP14.6□□□□□ -0.07
USP47-207ENST00000527733 DOC2AQ14183 400 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 ZNF77Q15935 545 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 ABRAXAS1Q6UWZ7 409 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 GALNT7Q86SF2 657 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 DPP10Q8N608 796 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 L3HYPDHQ96EM0 354 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 SLC38A2Q96QD8 506 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 PRSS51A0A1B0GVH4 220 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 G3V2L1 256 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 UBXN7O94888 489 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 CD72P21854 359 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 ETV4P43268 484 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 ZNF763Q0D2J5 394 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 MTAPQ13126 283 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 DEPDC1Q5TB30 811 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 FBXO15Q8NCQ5 510 aaPredicted RBP14.6□□□□□ -0.07
USP47-207ENST00000527733 OR52B6Q8NGF0 335 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 TSPEARQ8WU66 669 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 THUMPD1Q9NXG2 353 aaKnown RBP14.6□□□□□ -0.07
USP47-207ENST00000527733 KLHL42Q9P2K6 505 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 GTF2A1LQ9UNN4 478 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 DLGAP4Q9Y2H0 992 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 AP4B1Q9Y6B7 739 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 MROH6A6NGR9 719 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 FAM170BA6NMN3 283 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 MT-ND1P03886 318 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 MAGEA3P43357 314 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 TNFRSF4P43489 277 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 ACADVLP49748 655 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 GALNT1Q10472 559 aaPredicted RBP14.6□□□□□ -0.07
USP47-207ENST00000527733 CDKL4Q5MAI5 379 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 LPCAT4Q643R3 524 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 SLC2A7Q6PXP3 512 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 TICAM1Q8IUC6 712 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 WFDC5Q8TCV5 224 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 CENPNQ96H22 339 aaPredicted RBP14.6□□□□□ -0.07
USP47-207ENST00000527733 C1orf21Q9H246 121 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 DNAAF2Q9NVR5 837 aaKnown RBP14.6□□□□□ -0.07
USP47-207ENST00000527733 NEDD8Q15843 81 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 DUOXA1Q1HG43 343 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 TYSND1Q2T9J0 566 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 ZNF542PQ5EBM4 170 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 FAAH2Q6GMR7 532 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 NOXRED1Q6NXP6 359 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 COX18Q8N8Q8 333 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 SLC35A5Q9BS91 424 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 TMEM27Q9HBJ8 222 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 COPS7AQ9UBW8 275 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 PCTPQ9UKL6 214 aa14.6□□□□□ -0.07
USP47-207ENST00000527733 AQP12BA6NM10 295 aa14.59□□□□□ -0.07
USP47-207ENST00000527733 GBAP04062 536 aa14.59□□□□□ -0.07
USP47-207ENST00000527733 DHRS4L1P0CG22 281 aa14.59□□□□□ -0.07
USP47-207ENST00000527733 MYCLP1P12525 358 aaPredicted RBP14.59□□□□□ -0.07
USP47-207ENST00000527733 RAB28P51157 221 aa14.59□□□□□ -0.07
USP47-207ENST00000527733 CHN2P52757 468 aa14.59□□□□□ -0.07
USP47-207ENST00000527733 ACTR3P61158 418 aa14.59□□□□□ -0.07
USP47-207ENST00000527733 HNRNPKP61978 463 aaKnown RBP eCLIP14.59□□□□□ -0.07
USP47-207ENST00000527733 PDK3Q15120 406 aa14.59□□□□□ -0.07
USP47-207ENST00000527733 PPP1R3AQ16821 1122 aa14.59□□□□□ -0.07
USP47-207ENST00000527733 DENND5AQ6IQ26 1287 aa14.59□□□□□ -0.07
USP47-207ENST00000527733 CHMP1BQ7LBR1 199 aa14.59□□□□□ -0.07
USP47-207ENST00000527733 AMIGO1Q86WK6 493 aa14.59□□□□□ -0.07
USP47-207ENST00000527733 AQP12AQ8IXF9 295 aa14.59□□□□□ -0.07
USP47-207ENST00000527733 PIGKQ92643 395 aa14.59□□□□□ -0.07
USP47-207ENST00000527733 PTERQ96BW5 349 aa14.59□□□□□ -0.07
USP47-207ENST00000527733 LRCH3Q96II8 777 aa14.59□□□□□ -0.07
USP47-207ENST00000527733 Q96MT0 163 aa14.59□□□□□ -0.07
USP47-207ENST00000527733 SLC39A3Q9BRY0 314 aa14.59□□□□□ -0.07
USP47-207ENST00000527733 APOOQ9BUR5 198 aa14.59□□□□□ -0.07
USP47-207ENST00000527733 PCDHAC1Q9H158 963 aa14.59□□□□□ -0.07
USP47-207ENST00000527733 IL21Q9HBE4 155 aa14.59□□□□□ -0.07
USP47-207ENST00000527733 UTS2RQ9UKP6 389 aa14.59□□□□□ -0.07
USP47-207ENST00000527733 LYVE1Q9Y5Y7 322 aa14.59□□□□□ -0.07
USP47-207ENST00000527733 HOXC11O43248 304 aaPredicted RBP14.59□□□□□ -0.07
USP47-207ENST00000527733 OXR1Q8N573 874 aa14.59□□□□□ -0.07
USP47-207ENST00000527733 PKMYT1Q99640 499 aa14.59□□□□□ -0.07
USP47-207ENST00000527733 NDC1Q9BTX1 674 aa14.59□□□□□ -0.07
USP47-207ENST00000527733 GRIP2Q9C0E4 1043 aa14.59□□□□□ -0.07
USP47-207ENST00000527733 ATAD5Q96QE3 1844 aa14.59□□□□□ -0.07
USP47-207ENST00000527733 ADAMDEC1O15204 470 aa14.59□□□□□ -0.07
USP47-207ENST00000527733 CAPN5O15484 640 aaPredicted RBP14.59□□□□□ -0.07
USP47-207ENST00000527733 SNNO75324 88 aaPredicted RBP14.59□□□□□ -0.07
USP47-207ENST00000527733 SLC16A8O95907 504 aa14.59□□□□□ -0.07
USP47-207ENST00000527733 PENKP01210 267 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms