RNA–Protein interactions for RNA: ENST00000515996.1

SCARNA21.1-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.1-201ENST00000515996 MIS18AQ9NYP9 233 aa-0.76□□□□□ -2.53
SCARNA21.1-201ENST00000515996 RAI14Q9P0K7 980 aa-0.76□□□□□ -2.53
SCARNA21.1-201ENST00000515996 SLC17A7Q9P2U7 560 aa-0.76□□□□□ -2.53
SCARNA21.1-201ENST00000515996 TSPAN16Q9UKR8 245 aa-0.76□□□□□ -2.53
SCARNA21.1-201ENST00000515996 MTUS1Q9ULD2 1270 aa-0.76□□□□□ -2.53
SCARNA21.1-201ENST00000515996 CCPG1Q9ULG6 757 aa-0.76□□□□□ -2.53
SCARNA21.1-201ENST00000515996 NOB1Q9ULX3 412 aaKnown RBP-0.76□□□□□ -2.53
SCARNA21.1-201ENST00000515996 KCNJ14Q9UNX9 436 aa-0.76□□□□□ -2.53
SCARNA21.1-201ENST00000515996 PCDHA10Q9Y5I2 948 aa-0.76□□□□□ -2.53
SCARNA21.1-201ENST00000515996 CLCA3PQ9Y6N3 262 aa-0.76□□□□□ -2.53
SCARNA21.1-201ENST00000515996 U3KQ87 197 aa-0.76□□□□□ -2.53
SCARNA21.1-201ENST00000515996 MROH7Q68CQ1 1323 aa-0.76□□□□□ -2.53
SCARNA21.1-201ENST00000515996 PCDH11XQ9BZA7 1347 aa-0.76□□□□□ -2.53
SCARNA21.1-201ENST00000515996 USP42Q9H9J4 1324 aaKnown RBP-0.76□□□□□ -2.53
SCARNA21.1-201ENST00000515996 CLSPNQ9HAW4 1339 aa-0.76□□□□□ -2.53
SCARNA21.1-201ENST00000515996 PNPLA6Q8IY17 1366 aa-0.76□□□□□ -2.53
SCARNA21.1-201ENST00000515996 NPC1L1Q9UHC9 1359 aa-0.76□□□□□ -2.53
SCARNA21.1-201ENST00000515996 CASKIN1Q8WXD9 1431 aa-0.76□□□□□ -2.53
SCARNA21.1-201ENST00000515996 ATP10DQ9P241 1426 aa-0.76□□□□□ -2.53
SCARNA21.1-201ENST00000515996 PTPRMP28827 1452 aa-0.76□□□□□ -2.53
SCARNA21.1-201ENST00000515996 SHANK2Q9UPX8 1470 aa-0.76□□□□□ -2.53
SCARNA21.1-201ENST00000515996 MAST1Q9Y2H9 1570 aa-0.76□□□□□ -2.53
SCARNA21.1-201ENST00000515996 CHD1O14646 1710 aa-0.76□□□□□ -2.53
SCARNA21.1-201ENST00000515996 BCORL1Q5H9F3 1711 aa-0.76□□□□□ -2.53
SCARNA21.1-201ENST00000515996 TNS1Q9HBL0 1735 aaKnown RBP-0.76□□□□□ -2.53
SCARNA21.1-201ENST00000515996 NUP98P52948 1817 aa-0.76□□□□□ -2.53
SCARNA21.1-201ENST00000515996 KIAA1671Q9BY89 1806 aa-0.76□□□□□ -2.53
SCARNA21.1-201ENST00000515996 NCKAP5O14513 1909 aa-0.76□□□□□ -2.53
SCARNA21.1-201ENST00000515996 KIAA1549Q9HCM3 1950 aa-0.76□□□□□ -2.53
SCARNA21.1-201ENST00000515996 HEATR5BQ9P2D3 2071 aa-0.76□□□□□ -2.53
SCARNA21.1-201ENST00000515996 DOCK8Q8NF50 2099 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 BAZ2AQ9UIF9 1905 aaKnown RBP-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 ARAP2Q8WZ64 1704 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 SHANK3Q9BYB0 1731 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 RIMS1Q86UR5 1692 aaKnown RBP-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 NFAT5O94916 1531 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 CLASP1Q7Z460 1538 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 NCOA2Q15596 1464 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 PXDNQ92626 1479 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 TDRD9Q8NDG6 1382 aaKnown RBP-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 RPAP1Q9BWH6 1393 aaPredicted RBP-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 ADGRF5Q8IZF2 1346 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 IGLV3-16A0A075B6K0 115 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 IGLV5-45A0A087WSX0 123 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 A0A1B0GW55 424 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 A0A1W2PRG0 241 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 HTR3EA5X5Y0 456 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 VWA3AA6NCI4 1184 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 LRRC14BA6NHZ5 514 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 ZNF233A6NK53 670 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 SH2D7A6NKC9 451 aaPredicted RBP-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 FAM90A26D6RGX4 464 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 C5orf67F2Z3F1 127 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 H0Y626 953 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 FXYD1O00168 92 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 CDC7O00311 574 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 PDPK1O15530 556 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 SLC7A4O43246 635 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 SYNGR3O43761 229 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 TLX2O43763 284 aaPredicted RBP-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 KATNA1O75449 491 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 RFPL2O75678 378 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 GJB3O75712 270 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 CNTN5O94779 1100 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 CPNE6O95741 557 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 AIFM1O95831 613 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 EML2O95834 649 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 TBX18O95935 607 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 MT-CO1P00395 513 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 TSHBP01222 138 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 TFPTP0C1Z6 253 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 DUX4L2P0CJ85 424 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 DUX4L3P0CJ86 424 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 DUX4L5P0CJ88 424 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 DUX4L6P0CJ89 424 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 DUX4L7P0CJ90 424 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 MBL2P11226 248 aaPredicted RBP-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 SFTPCP11686 197 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 RNASE3P12724 160 aaKnown RBP-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 POU2F1P14859 743 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 CPN1P15169 458 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 NCK1P16333 377 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 GCFC2P16383 781 aaKnown RBP-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 ZNF708P17019 499 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 BPIP17213 487 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 BTF3P20290 206 aaKnown RBP-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 MATN1P21941 496 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 TGM2P21980 687 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 OMGP23515 440 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 GCH1P30793 250 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 DUTP33316 252 aaKnown RBP-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 BTDP43251 543 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 MAGEB1P43366 347 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 SLC11A1P49279 550 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 TCTAP57738 103 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 IL2P60568 153 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 RPL37AP61513 92 aaKnown RBP-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 CCNA1P78396 465 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 ADORA2A-AS1P86434 159 aa-0.77□□□□□ -2.53
SCARNA21.1-201ENST00000515996 GALK2Q01415 458 aa-0.77□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms