RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	BDKRB2	P30411	391 aa		4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	CSTF2	P33240	577 aa	Known RBP eCLIP	4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	TCF7	P36402	384 aa	Predicted RBP	4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	ARPC4	P59998	168 aa		4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	MC1R	Q01726	317 aa		4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	LTB	Q06643	244 aa		4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	GRSF1	Q12849	480 aa	Known RBP eCLIP	4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	HNRNPD	Q14103	355 aa	Known RBP	4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	MEA1	Q16626	185 aa		4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	IMMT	Q16891	758 aa	Known RBP	4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	SHROOM1	Q2M3G4	852 aa	Predicted RBP	4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	AMZ1	Q400G9	498 aa		4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	RILPL1	Q5EBL4	403 aa		4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	FAM69B	Q5VUD6	431 aa		4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	PLPP4	Q5VZY2	271 aa		4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	NAA16	Q6N069	864 aa	Predicted RBP	4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	IRGC	Q6NXR0	463 aa		4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	SARM1	Q6SZW1	724 aa		4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	GBP6	Q6ZN66	633 aa		4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	ARMCX2	Q7L311	632 aa		4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	TBC1D10C	Q8IV04	446 aa		4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	C17orf53	Q8N3J3	647 aa	Predicted RBP	4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	MSANTD4	Q8NCY6	345 aa		4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	OR8K5	Q8NH50	307 aa		4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	NCOA7	Q8NI08	942 aa		4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	KIF18A	Q8NI77	898 aa		4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	SPATA20	Q8TB22	786 aa		4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	ANKRD49	Q8WVL7	239 aa		4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	ORAI1	Q96D31	301 aa		4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	TBC1D31	Q96DN5	1066 aa		4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	SCMH1	Q96GD3	660 aa		4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	GRAMD2B	Q96HH9	432 aa		4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	EPSTI1	Q96J88	318 aa		4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	ZNF479	Q96JC4	524 aa		4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	C3orf30	Q96M34	536 aa		4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	RUFY1	Q96T51	708 aa		4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	GAD1	Q99259	594 aa		4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	MTG1	Q9BT17	334 aa	Predicted RBP	4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	MMADHC	Q9H3L0	296 aa	Predicted RBP	4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	SEBOX	Q9HB31	216 aa	Predicted RBP	4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	PDRG1	Q9NUG6	133 aa		4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	SETD4	Q9NVD3	440 aa		4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	RRP15	Q9Y3B9	282 aa	Known RBP	4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	RP1L1	Q8IWN7	2480 aa	Predicted RBP	4.86	□□□□□ -1.63
CACNA1C-223	ENST00000465278	hCG_1807616	A0A1W2PRN6	198 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	HIDE1	A8MVS5	230 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278		E9PAM4	449 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	PLRG1	O43660	514 aa	Known RBP	4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	PRKAB2	O43741	272 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	PFKFB2	O60825	505 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	CLDN14	O95500	239 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	STAMBP	O95630	424 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	CAVIN2	O95810	425 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	EGF	P01133	1207 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	RPS2	P15880	293 aa	Known RBP	4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	ALOX12	P18054	663 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	ACTN2	P35609	894 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	MATR3	P43243	847 aa	Known RBP eCLIP	4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	CXCL12	P48061	93 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	PEX5	P50542	639 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	ZBED6	P86452	979 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	MYBPH	Q13203	477 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	IRF3	Q14653	427 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	LETM2	Q2VYF4	491 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	USH1G	Q495M9	461 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	TMEM198	Q66K66	360 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	TMEM154	Q6P9G4	183 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	RHBDF2	Q6PJF5	856 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	ABRAXAS1	Q6UWZ7	409 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	SYT10	Q6XYQ8	523 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	DPPA4	Q7L190	304 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	C10orf67	Q8IYJ2	551 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	CCAR2	Q8N163	923 aa	Known RBP	4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	CARNMT1	Q8N4J0	409 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	NKAIN3	Q8N8D7	197 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	KIAA1524	Q8TCG1	905 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	SGCD	Q92629	289 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	ZNF75CP	Q92670	426 aa	Predicted RBP	4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	APBB2	Q92870	758 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	SLC35B4	Q969S0	331 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	MTBP	Q96DY7	904 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	CMKLR1	Q99788	373 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	LLPH	Q9BRT6	129 aa	Known RBP	4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	WAC	Q9BTA9	647 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	PI4K2A	Q9BTU6	479 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	SLC7A5P2	Q9GIP4	190 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	ABCG4	Q9H172	646 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	C17orf75	Q9HAS0	396 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	STARD5	Q9NSY2	213 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	TCP11L1	Q9NUJ3	509 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	ZNF446	Q9NWS9	450 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	AIPL1	Q9NZN9	384 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	COPG2	Q9UBF2	871 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	FBXL17	Q9UF56	701 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	SESN1	Q9Y6P5	492 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	VWA8	A3KMH1	1905 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	ABCA7	Q8IZY2	2146 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	RYR3	Q15413	4870 aa		4.85	□□□□□ -1.63
CACNA1C-223	ENST00000465278	COL6A5	A8TX70	2615 aa		4.84	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms