RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 RNF11Q9Y3C5 154 aa19.17■□□□□ 0.66
SNX27-204ENST00000458013 ARHGAP23Q9P227 1491 aa19.16■□□□□ 0.66
SNX27-204ENST00000458013 INHAP05111 366 aa19.16■□□□□ 0.66
SNX27-204ENST00000458013 CDH1P12830 882 aa19.16■□□□□ 0.66
SNX27-204ENST00000458013 CLCNKAP51800 687 aa19.16■□□□□ 0.66
SNX27-204ENST00000458013 TLCD1Q96CP7 247 aa19.16■□□□□ 0.66
SNX27-204ENST00000458013 ZNF347Q96SE7 839 aa19.16■□□□□ 0.66
SNX27-204ENST00000458013 ZNF471Q9BX82 626 aaPredicted RBP19.16■□□□□ 0.66
SNX27-204ENST00000458013 ZCCHC3Q9NUD5 404 aaKnown RBP19.16■□□□□ 0.66
SNX27-204ENST00000458013 KLRF1Q9NZS2 232 aa19.16■□□□□ 0.66
SNX27-204ENST00000458013 TRAV6A0A075B6T7 132 aa19.16■□□□□ 0.66
SNX27-204ENST00000458013 ALPPL2P10696 532 aa19.16■□□□□ 0.66
SNX27-204ENST00000458013 PRPS2P11908 318 aa19.16■□□□□ 0.66
SNX27-204ENST00000458013 GATMP50440 423 aa19.16■□□□□ 0.66
SNX27-204ENST00000458013 RASSF5Q8WWW0 418 aa19.16■□□□□ 0.66
SNX27-204ENST00000458013 GSKIPQ9P0R6 139 aa19.16■□□□□ 0.66
SNX27-204ENST00000458013 KIAA1210Q9ULL0 1709 aa19.16■□□□□ 0.66
SNX27-204ENST00000458013 CLIC1O00299 241 aa19.16■□□□□ 0.66
SNX27-204ENST00000458013 CLIC3O95833 236 aa19.16■□□□□ 0.66
SNX27-204ENST00000458013 RAB12Q6IQ22 244 aa19.16■□□□□ 0.66
SNX27-204ENST00000458013 THOC6Q86W42 341 aaKnown RBP19.16■□□□□ 0.66
SNX27-204ENST00000458013 NLGN2Q8NFZ4 835 aa19.16■□□□□ 0.66
SNX27-204ENST00000458013 ANKRA2Q9H9E1 313 aa19.16■□□□□ 0.66
SNX27-204ENST00000458013 SIX2Q9NPC8 291 aa19.16■□□□□ 0.66
SNX27-204ENST00000458013 LYARQ9NX58 379 aaKnown RBP19.16■□□□□ 0.66
SNX27-204ENST00000458013 UPK3BL1B0FP48 263 aa19.16■□□□□ 0.66
SNX27-204ENST00000458013 UPK3BL2E5RIL1 263 aa19.16■□□□□ 0.66
SNX27-204ENST00000458013 APOL3O95236 402 aa19.16■□□□□ 0.66
SNX27-204ENST00000458013 CD40LGP29965 261 aa19.16■□□□□ 0.66
SNX27-204ENST00000458013 GDI1P31150 447 aa19.16■□□□□ 0.66
SNX27-204ENST00000458013 SLITRK4Q8IW52 837 aa19.16■□□□□ 0.66
SNX27-204ENST00000458013 ANKHQ9HCJ1 492 aa19.16■□□□□ 0.66
SNX27-204ENST00000458013 ZNF226Q9NYT6 803 aa19.16■□□□□ 0.66
SNX27-204ENST00000458013 CALML5Q9NZT1 146 aa19.16■□□□□ 0.66
SNX27-204ENST00000458013 WASH3PC4AMC7 463 aa19.16■□□□□ 0.66
SNX27-204ENST00000458013 GJA8P48165 433 aa19.16■□□□□ 0.66
SNX27-204ENST00000458013 MLIPQ5VWP3 458 aa19.16■□□□□ 0.66
SNX27-204ENST00000458013 ZNF285Q96NJ3 590 aa19.16■□□□□ 0.66
SNX27-204ENST00000458013 WDR26Q9H7D7 661 aa19.16■□□□□ 0.66
SNX27-204ENST00000458013 TMEM88BA6NKF7 163 aa19.15■□□□□ 0.66
SNX27-204ENST00000458013 LOC730098B7Z3J9 87 aa19.15■□□□□ 0.66
SNX27-204ENST00000458013 H6PDO95479 791 aa19.15■□□□□ 0.66
SNX27-204ENST00000458013 ESR1P03372 595 aa19.15■□□□□ 0.66
SNX27-204ENST00000458013 ARL3P36405 182 aa19.15■□□□□ 0.66
SNX27-204ENST00000458013 KCNQ1P51787 676 aa19.15■□□□□ 0.66
SNX27-204ENST00000458013 BPIFB1Q8TDL5 484 aa19.15■□□□□ 0.66
SNX27-204ENST00000458013 DNAJC27Q9NZQ0 273 aa19.15■□□□□ 0.66
SNX27-204ENST00000458013 CNTN3Q9P232 1028 aa19.15■□□□□ 0.66
SNX27-204ENST00000458013 GALPQ9UBC7 116 aa19.15■□□□□ 0.66
SNX27-204ENST00000458013 KCNK6Q9Y257 313 aa19.15■□□□□ 0.66
SNX27-204ENST00000458013 NRP1O14786 923 aa19.15■□□□□ 0.66
SNX27-204ENST00000458013 ELK4P28324 431 aa19.15■□□□□ 0.66
SNX27-204ENST00000458013 TEAD4Q15561 434 aa19.15■□□□□ 0.66
SNX27-204ENST00000458013 POGLUT1Q8NBL1 392 aa19.15■□□□□ 0.66
SNX27-204ENST00000458013 OR52E4Q8NGH9 312 aa19.15■□□□□ 0.66
SNX27-204ENST00000458013 HSPBAP1Q96EW2 488 aa19.15■□□□□ 0.66
SNX27-204ENST00000458013 MSLNLQ96KJ4 702 aa19.15■□□□□ 0.66
SNX27-204ENST00000458013 A0A1W2PPL8 197 aa19.15■□□□□ 0.66
SNX27-204ENST00000458013 A8MT66 165 aa19.15■□□□□ 0.66
SNX27-204ENST00000458013 GNAZP19086 355 aa19.15■□□□□ 0.66
SNX27-204ENST00000458013 HOXA10P31260 410 aaPredicted RBP19.15■□□□□ 0.66
SNX27-204ENST00000458013 VIPR1P32241 457 aa19.15■□□□□ 0.66
SNX27-204ENST00000458013 RAB8AP61006 207 aa19.15■□□□□ 0.66
SNX27-204ENST00000458013 RPS13P62277 151 aaKnown RBP19.15■□□□□ 0.66
SNX27-204ENST00000458013 TOMM5Q8N4H5 51 aa19.15■□□□□ 0.66
SNX27-204ENST00000458013 LOC100130705A0A1B0GUX0 176 aa19.15■□□□□ 0.66
SNX27-204ENST00000458013 HCKP08631 526 aa19.15■□□□□ 0.66
SNX27-204ENST00000458013 SRCP12931 536 aa19.15■□□□□ 0.66
SNX27-204ENST00000458013 HLA-EP13747 358 aa19.15■□□□□ 0.66
SNX27-204ENST00000458013 NRG3P56975 720 aa19.15■□□□□ 0.66
SNX27-204ENST00000458013 ZDHHC24Q6UX98 284 aa19.15■□□□□ 0.66
SNX27-204ENST00000458013 PCDHGA11Q9Y5H2 935 aa19.15■□□□□ 0.66
SNX27-204ENST00000458013 TRBC2A0A5B9 178 aa19.15■□□□□ 0.66
SNX27-204ENST00000458013 ITGA5P08648 1049 aa19.15■□□□□ 0.66
SNX27-204ENST00000458013 IMPDH1P20839 514 aa19.15■□□□□ 0.66
SNX27-204ENST00000458013 PRAMEF14Q5SWL7 426 aa19.15■□□□□ 0.66
SNX27-204ENST00000458013 PRAMEF13Q5VWM6 474 aa19.15■□□□□ 0.66
SNX27-204ENST00000458013 OR4F6Q8NGB9 312 aa19.15■□□□□ 0.66
SNX27-204ENST00000458013 RNF39Q9H2S5 420 aa19.15■□□□□ 0.66
SNX27-204ENST00000458013 PIGVQ9NUD9 493 aa19.15■□□□□ 0.66
SNX27-204ENST00000458013 MST1RQ04912 1400 aa19.14■□□□□ 0.66
SNX27-204ENST00000458013 C6orf47O95873 294 aa19.14■□□□□ 0.66
SNX27-204ENST00000458013 TYRP1P17643 537 aa19.14■□□□□ 0.66
SNX27-204ENST00000458013 PGGT1BP53609 377 aa19.14■□□□□ 0.66
SNX27-204ENST00000458013 AP1S1P61966 158 aa19.14■□□□□ 0.66
SNX27-204ENST00000458013 PRKD1Q15139 912 aaPredicted RBP19.14■□□□□ 0.66
SNX27-204ENST00000458013 CARD17Q5XLA6 110 aa19.14■□□□□ 0.66
SNX27-204ENST00000458013 PHC3Q8NDX5 983 aa19.14■□□□□ 0.66
SNX27-204ENST00000458013 OR5T2Q8NGG2 359 aa19.14■□□□□ 0.66
SNX27-204ENST00000458013 FAM92BQ6ZTR7 304 aa19.14■□□□□ 0.65
SNX27-204ENST00000458013 OXR1Q8N573 874 aa19.14■□□□□ 0.65
SNX27-204ENST00000458013 EZH1Q92800 747 aaPredicted RBP19.14■□□□□ 0.65
SNX27-204ENST00000458013 SH3YL1Q96HL8 342 aaPredicted RBP19.14■□□□□ 0.65
SNX27-204ENST00000458013 KCTD7Q96MP8 289 aa19.14■□□□□ 0.65
SNX27-204ENST00000458013 OXSMQ9NWU1 459 aa19.14■□□□□ 0.65
SNX27-204ENST00000458013 P2RX2Q9UBL9 471 aa19.14■□□□□ 0.65
SNX27-204ENST00000458013 VPS29Q9UBQ0 182 aa19.14■□□□□ 0.65
SNX27-204ENST00000458013 SYN3O14994 580 aa19.14■□□□□ 0.65
SNX27-204ENST00000458013 AGTR2P50052 363 aa19.14■□□□□ 0.65
SNX27-204ENST00000458013 ATXN7L3Q14CW9 347 aaPredicted RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms