RNA–Protein interactions for RNA: ENST00000445481.1

RPL39P40-201, Transcript of ribosomal protein L39 pseudogene 40, humanhuman

BASIC

Gene RPL39P40, Length 146 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P40-201ENST00000445481 RIMBP3CA6NJZ7 1639 aa2.78□□□□□ -1.96
RPL39P40-201ENST00000445481 RIMBP3BA6NNM3 1639 aa2.78□□□□□ -1.96
RPL39P40-201ENST00000445481 RIMBP3Q9UFD9 1639 aa2.78□□□□□ -1.96
RPL39P40-201ENST00000445481 A0A1B0GUL6 1792 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 PLIN4Q96Q06 1357 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 TMEM2Q9UHN6 1383 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 SPATA31A5Q5VU36 1347 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 SPATA31A7Q8IWB4 1347 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 A0A1B0GVI7 797 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 A0A1W2PPL8 197 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 TCRBV5S4A2TA0A5A2 114 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 OR6C74A6NCV1 312 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 FAM86C2PA6NEL3 165 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 FAM159BA6NKW6 160 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 A8MV72 311 aaPredicted RBP2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 B4DXG7 233 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 C1QTNF3-AMACRE9PGA6 284 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 UBXN8O00124 270 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 SGK1O00141 431 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 AIPO00170 330 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 SLC1A7O00341 560 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 POLRMTO00411 1230 aaKnown RBP2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 IFRD1O00458 451 aaPredicted RBP2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 PPEF2O14830 753 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 SYN3O14994 580 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 PER2O15055 1255 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 TBX3O15119 743 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 TO15178 435 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 CHADO15335 359 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 EIF3DO15371 548 aaKnown RBP eCLIP2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 SLC31A2O15432 143 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 AIREO43918 545 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 BRINP1O60477 761 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 HCN1O60741 890 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 NDUFS6O75380 124 aaKnown RBP2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 SLC43A1O75387 559 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 VPS26AO75436 327 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 PMPCBO75439 489 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 PRDM1O75626 825 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 RPS6KA4O75676 772 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 CDC123O75794 336 aaPredicted RBP2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 ZMPSTE24O75844 475 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 AKAP3O75969 853 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 INMTO95050 263 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 PTBP3O95758 552 aaKnown RBP2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 ANGPTL1O95841 491 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 IFNA10P01566 189 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 IGHV2-70P01814 119 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 DNTTP04053 509 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 RPLP0P05388 317 aaKnown RBP2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 URODP06132 367 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 FCER2P06734 321 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 HTR1AP08908 422 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 FGRP09769 529 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 ACSM4P0C7M7 580 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 OR56A5P0C7T3 313 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 ZNF806P0C7X5 589 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 CD36P16671 472 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 ARF4P18085 180 aaPredicted RBP2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 TNNI1P19237 187 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 CD72P21854 359 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 KCNA5P22460 613 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 XPAP23025 273 aaPredicted RBP2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 RPS3P23396 243 aaKnown RBP eCLIP2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 DDX6P26196 483 aaKnown RBP eCLIP2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 PSMB9P28065 219 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 ELK4P28324 431 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 GTF2E2P29084 291 aaKnown RBP2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 ACSL1P33121 698 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 BMP8BP34820 402 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 SPRP35270 261 aaPredicted RBP2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 ATP5C1P36542 298 aaKnown RBP2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 ETV5P41161 510 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 TECP42680 631 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 SLC1A3P43003 542 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 BRCC3P46736 316 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 ATP5OP48047 213 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 RFX2P48378 723 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 PPP3CCP48454 512 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 LIG4P49917 911 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 RPL14P50914 215 aaKnown RBP2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 CYP2J2P51589 502 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 NR0B1P51843 470 aaKnown RBP2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 CAPZA1P52907 286 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 ATXN3P54252 364 aaPredicted RBP2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 ARSFP54793 590 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 CASP7P55210 303 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 EIF6P56537 245 aaKnown RBP2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 RRAS2P62070 204 aaPredicted RBP2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 TIMM10P62072 90 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 NCS1P62166 190 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 BTG1P62324 171 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 HERVK_113P63132 956 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 NOMO3P69849 1222 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 CCNA1P78396 465 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 TFAMQ00059 246 aaKnown RBP2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 PURAQ00577 322 aaKnown RBP2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 MYL7Q01449 175 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 DEFA6Q01524 100 aa2.77□□□□□ -1.97
RPL39P40-201ENST00000445481 EMX1Q04741 257 aaPredicted RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms