RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 TCF3P15923 654 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 SERPINB10P48595 397 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 CENPAP49450 140 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 TMED10P49755 219 aaKnown RBP4.79□□□□□ -1.64
SMAD4-202ENST00000398417 PRKAG1P54619 331 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 SSTP61278 116 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 ARSIQ5FYB1 569 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 XKR7Q5GH72 579 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 COQ5Q5HYK3 327 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 RBM12BQ8IXT5 1001 aaKnown RBP4.79□□□□□ -1.64
SMAD4-202ENST00000398417 SPARTQ8N0X7 666 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 PSD4Q8NDX1 1056 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 OR8J3Q8NGG0 315 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 CPPED1Q9BRF8 314 aaPredicted RBP4.79□□□□□ -1.64
SMAD4-202ENST00000398417 CHCHD6Q9BRQ6 235 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 ELAC1Q9H777 363 aaKnown RBP4.79□□□□□ -1.64
SMAD4-202ENST00000398417 POLE4Q9NR33 117 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 SRRDQ9UH36 339 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 PSME2Q9UL46 239 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 AP3M1Q9Y2T2 418 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 PCDHGA8Q9Y5G5 932 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 M0R129 80 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 SUV39H1O43463 412 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 FPR1P21462 350 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 GRK3P35626 688 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 SUOXP51687 545 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 VBP1P61758 197 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 SMN1Q16637 294 aaKnown RBP4.79□□□□□ -1.64
SMAD4-202ENST00000398417 TBRG1Q3YBR2 411 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 TRAPPC5Q8IUR0 188 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 RIMKLAQ8IXN7 391 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 NXPE1Q8N323 547 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 OR10G2Q8NGC3 310 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 TBC1D15Q8TC07 691 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 RHBDF1Q96CC6 855 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 BARD1Q99728 777 aaKnown RBP4.79□□□□□ -1.64
SMAD4-202ENST00000398417 EPS8L2Q9H6S3 715 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 CD320Q9NPF0 282 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 HEBP1Q9NRV9 189 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 FAIMQ9NVQ4 179 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 ABCG2Q9UNQ0 655 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 TMEM189-UBE2V1I3L0A0 370 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 CNOT3O75175 753 aaKnown RBP4.78□□□□□ -1.64
SMAD4-202ENST00000398417 ERN1O75460 977 aaKnown RBP4.78□□□□□ -1.64
SMAD4-202ENST00000398417 C6orf47O95873 294 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 C1SP09871 688 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 CLCN7P51798 805 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 RPS13P62277 151 aaKnown RBP4.78□□□□□ -1.64
SMAD4-202ENST00000398417 NFATC3Q12968 1075 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 DGKKQ5KSL6 1271 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 GPRC6AQ5T6X5 926 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 ANXA8L1Q5VT79 327 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 BORAQ6PGQ7 559 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 HMGN2P46Q86SG4 172 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 NDNFQ8TB73 568 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 SORCS1Q8WY21 1168 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 MTERF1Q99551 399 aaKnown RBP4.78□□□□□ -1.64
SMAD4-202ENST00000398417 OR2AG1Q9H205 316 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 IL26Q9NPH9 171 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 ACSL6Q9UKU0 697 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 PRKAB1Q9Y478 270 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 KIAA1217Q5T5P2 1943 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 URB1O60287 2271 aaKnown RBP4.78□□□□□ -1.64
SMAD4-202ENST00000398417 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.78□□□□□ -1.64
SMAD4-202ENST00000398417 H0YAE9 185 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 TSPAN12O95859 305 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 TGFB1P01137 390 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 SRCP12931 536 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 EPORP19235 508 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 SEPHS1P49903 392 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 CDC42P60953 191 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 ARF3P61204 181 aaPredicted RBP4.78□□□□□ -1.64
SMAD4-202ENST00000398417 ARF1P84077 181 aaKnown RBP4.78□□□□□ -1.64
SMAD4-202ENST00000398417 SMARCB1Q12824 385 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 CAMK2GQ13555 558 aaPredicted RBP4.78□□□□□ -1.64
SMAD4-202ENST00000398417 ATP13A5Q4VNC0 1218 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 GCNT6Q5T4J0 391 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 CPTPQ5TA50 214 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 RAET1GQ6H3X3 334 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 C8orf82Q6P1X6 216 aaPredicted RBP4.78□□□□□ -1.64
SMAD4-202ENST00000398417 DLEU7Q6UYE1 221 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 GALNT7Q86SF2 657 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 VRK3Q8IV63 474 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 NFKBIDQ8NI38 313 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 CYB5D2Q8WUJ1 264 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 HDAC2Q92769 488 aaKnown RBP4.78□□□□□ -1.64
SMAD4-202ENST00000398417 VMP1Q96GC9 406 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 KAT8Q9H7Z6 458 aaKnown RBP4.78□□□□□ -1.64
SMAD4-202ENST00000398417 CTPS2Q9NRF8 586 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 RPS6KA6Q9UK32 745 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 WNT9AO14904 365 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 LAG3P18627 525 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 SDC1P18827 310 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 RRM2P31350 389 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 GPR1P46091 355 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 SCARB2Q14108 478 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 RFX4Q33E94 735 aa4.78□□□□□ -1.64
SMAD4-202ENST00000398417 FNDC3BQ53EP0 1204 aaKnown RBP4.78□□□□□ -1.64
SMAD4-202ENST00000398417 INO80DQ53TQ3 878 aaPredicted RBP4.78□□□□□ -1.64
SMAD4-202ENST00000398417 PLPP4Q5VZY2 271 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms