RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 FAM214AQ32MH5 1076 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 USP49Q70CQ1 688 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 SVBPQ8N300 66 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 MFSD8Q8NHS3 518 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 BTF3L4Q96K17 158 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 C7orf50Q9BRJ6 194 aaKnown RBP12.95□□□□□ -0.34
PRDM16-201ENST00000270722 PTPRHQ9HD43 1115 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 POLE4Q9NR33 117 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 HIF3AQ9Y2N7 669 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 CLTCL1P53675 1640 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 AIMP2Q13155 320 aaKnown RBP12.95□□□□□ -0.34
PRDM16-201ENST00000270722 WSCD2Q2TBF2 565 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 PLEKHN1Q494U1 663 aaPredicted RBP12.95□□□□□ -0.34
PRDM16-201ENST00000270722 MBOAT1Q6ZNC8 495 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 HORMAD2Q8N7B1 307 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 OR51D1Q8NGF3 324 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 FNDC8Q8TC99 324 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 ELMO3Q96BJ8 720 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 NPIPA5E9PKD4 350 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 NRP2O60462 931 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 TPSB2P20231 275 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 GRIA2P42262 883 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 TPSAB1Q15661 275 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 MOGQ16653 247 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 CDKAL1Q5VV42 579 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 DEFB132Q7Z7B7 95 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 GHDCQ8N2G8 530 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 C22orf15Q8WYQ4 148 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 HIPK2Q9H2X6 1198 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 GPATCH2Q9NW75 528 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 NPIPA1Q9UND3 350 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 SLC27A5Q9Y2P5 690 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 A0A0A6YYH2 397 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 A6NJ64 397 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 TMEM127O75204 238 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 GPIP06744 558 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 HNF1AP20823 631 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 AHCYP23526 432 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 DGKQP52824 942 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 DCDC1P59894 354 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 GTPBP3Q969Y2 492 aaKnown RBP12.95□□□□□ -0.34
PRDM16-201ENST00000270722 KCNF1Q9H3M0 494 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 BPIFA1Q9NP55 256 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 SDHAF2Q9NX18 166 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 DUSP10Q9Y6W6 482 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 KHNYNO15037 678 aaKnown RBP12.95□□□□□ -0.34
PRDM16-201ENST00000270722 CTPS1P17812 591 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 POMZP3Q6PJE2 187 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 RHOUQ7L0Q8 258 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 POU5F2Q8N7G0 328 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 TRAPPC12Q8WVT3 735 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 RGMAQ96B86 450 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 TRMT61BQ9BVS5 477 aaKnown RBP12.95□□□□□ -0.34
PRDM16-201ENST00000270722 Q9N2J8 555 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 KLRF1Q9NZS2 232 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 SLC6A4P31645 630 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 VEGFCP49767 419 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 AARDQ4LEZ3 155 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 ARSKQ6UWY0 536 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 COX15Q7KZN9 410 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 FOXRED2Q8IWF2 684 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 ADIPOR1Q96A54 375 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 CAPN6Q9Y6Q1 641 aa12.95□□□□□ -0.34
PRDM16-201ENST00000270722 NIPAL4Q0D2K0 466 aa12.94□□□□□ -0.34
PRDM16-201ENST00000270722 SCGB2A2Q13296 93 aa12.94□□□□□ -0.34
PRDM16-201ENST00000270722 MELKQ14680 651 aa12.94□□□□□ -0.34
PRDM16-201ENST00000270722 RNASEH2BQ5TBB1 312 aaKnown RBP12.94□□□□□ -0.34
PRDM16-201ENST00000270722 ZNF776Q68DI1 518 aaPredicted RBP12.94□□□□□ -0.34
PRDM16-201ENST00000270722 PELOQ9BRX2 385 aaKnown RBP12.94□□□□□ -0.34
PRDM16-201ENST00000270722 ATRNO75882 1429 aa12.94□□□□□ -0.34
PRDM16-201ENST00000270722 ADAMTS13Q76LX8 1427 aa12.94□□□□□ -0.34
PRDM16-201ENST00000270722 EDDM13A0A1B0GTR0 161 aa12.94□□□□□ -0.34
PRDM16-201ENST00000270722 LRATO95237 230 aa12.94□□□□□ -0.34
PRDM16-201ENST00000270722 LUMP51884 338 aaPredicted RBP12.94□□□□□ -0.34
PRDM16-201ENST00000270722 PDK4Q16654 411 aa12.94□□□□□ -0.34
PRDM16-201ENST00000270722 RBM48Q5RL73 367 aaKnown RBP12.94□□□□□ -0.34
PRDM16-201ENST00000270722 DACT2Q5SW24 774 aa12.94□□□□□ -0.34
PRDM16-201ENST00000270722 FAM111BQ6SJ93 734 aa12.94□□□□□ -0.34
PRDM16-201ENST00000270722 SPATA22Q8NHS9 363 aa12.94□□□□□ -0.34
PRDM16-201ENST00000270722 EXOSC8Q96B26 276 aaKnown RBP12.94□□□□□ -0.34
PRDM16-201ENST00000270722 APOLD1Q96LR9 279 aa12.94□□□□□ -0.34
PRDM16-201ENST00000270722 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.94□□□□□ -0.34
PRDM16-201ENST00000270722 CDT1Q9H211 546 aa12.94□□□□□ -0.34
PRDM16-201ENST00000270722 NRXN1Q9ULB1 1477 aa12.94□□□□□ -0.34
PRDM16-201ENST00000270722 CD63P08962 238 aa12.94□□□□□ -0.34
PRDM16-201ENST00000270722 SLC2A2P11168 524 aaPredicted RBP12.94□□□□□ -0.34
PRDM16-201ENST00000270722 POLR2JP52435 117 aaKnown RBP12.94□□□□□ -0.34
PRDM16-201ENST00000270722 HMGN3Q15651 99 aa12.94□□□□□ -0.34
PRDM16-201ENST00000270722 CES3Q6UWW8 571 aa12.94□□□□□ -0.34
PRDM16-201ENST00000270722 SATL1Q86VE3 508 aa12.94□□□□□ -0.34
PRDM16-201ENST00000270722 CELF5Q8N6W0 485 aaKnown RBP12.94□□□□□ -0.34
PRDM16-201ENST00000270722 SLC35G5Q96KT7 338 aa12.94□□□□□ -0.34
PRDM16-201ENST00000270722 CD320Q9NPF0 282 aa12.94□□□□□ -0.34
PRDM16-201ENST00000270722 TMLHEQ9NVH6 421 aa12.94□□□□□ -0.34
PRDM16-201ENST00000270722 ASB6Q9NWX5 421 aa12.94□□□□□ -0.34
PRDM16-201ENST00000270722 CACNA1CQ13936 2221 aa12.94□□□□□ -0.34
PRDM16-201ENST00000270722 TNFRSF11BO00300 401 aa12.94□□□□□ -0.34
PRDM16-201ENST00000270722 IFNA1P01562 189 aa12.94□□□□□ -0.34
PRDM16-201ENST00000270722 APOC3P02656 99 aa12.94□□□□□ -0.34
PRDM16-201ENST00000270722 RPLP0P05388 317 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms