RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Wbp11Q923D5 641 aaKnown RBP8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Snrpb2Q9CQI7 225 aaKnown RBP8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Hacd2Q9D3B1 254 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Jph2Q9ET78 696 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Gpc1Q9QZF2 557 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Itgb1bp2Q9R000 350 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Cldn9Q9Z0S7 217 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Slc22a4Q9Z306 553 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Cfap77A0A087WRI3 283 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Slfn3A0A1L1STQ7 640 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Gm29776A0A286YEC0 699 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Olfr1253A2AUA2 318 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Wsb2O54929 404 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Srp54P14576 504 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Cyp2a4P15392 494 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Cyp2a5P20852 494 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Cdkn2bP55271 130 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Kpnb1P70168 876 aaKnown RBP8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Cpt1aP97742 773 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 ptchd1Q14B62 888 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Gm11992Q5SS90 291 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Lix1Q6P566 282 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Znf728Q6P5C7 752 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Tmeff1Q6PFE7 372 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Ubfd1Q78JW9 368 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Olfr1251Q7TQZ3 318 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Gstm7Q80W21 218 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Zcchc4Q8BKW4 512 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Cpne3Q8BT60 533 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Irf2bp1Q8R3Y8 584 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Lsm1Q8VC85 133 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Rnh1Q91VI7 456 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Crtc3Q91X84 619 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Tma16Q9CR02 221 aaKnown RBP8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Rex1bdQ9CYZ6 169 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Nudt14Q9D142 222 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Rhobtb1Q9DAK3 695 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 ItgaxQ9QXH4 1169 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Nr4a3Q9QZB6 627 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Morf4l2Q9R0Q4 288 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 VarsQ9Z1Q9 1263 aaKnown RBP8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Olfr652B9EHE6 318 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 MrasO08989 208 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Gnpda1O88958 289 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Bmp8aP34821 399 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Lrrc3P59034 257 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Lrrn4P59383 733 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Nanos3P60324 178 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Naa20P61600 178 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Fezf1Q0VDQ9 475 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Q32P12 615 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Arhgap17Q3UIA2 846 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Zfp280bQ505F4 534 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 UnklQ5FWH2 727 aaKnown RBP8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 9930111J21Rik1Q5SVP0 844 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Fam189a1Q6A044 515 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Olfr1036Q7TR85 310 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Megf11Q80T91 1091 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Fndc11Q80WB0 326 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 H2-M10.5Q85ZW7 330 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Lyve1Q8BHC0 318 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Naa25Q8BWZ3 972 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 PigtQ8BXQ2 582 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Shisa7Q8C3Q5 558 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Agr3Q8R3W7 165 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Cdhr1Q8VHP6 859 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 EtfdhQ921G7 616 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Gm16286Q9CQX6 220 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Gpn3Q9D3W4 284 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Tnfsf13Q9D777 241 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Tmigd1Q9D7L8 261 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Rgs20Q9QZB1 239 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Adam23Q9R1V7 829 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Cfap54Q8C6S9 3106 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Gm3173A6NAS3 172 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Tgfbr3lD3YZZ2 297 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 AmacrO09174 381 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 AlplP09242 524 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Clec2lP0C7M9 211 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 C2P21180 760 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 FurinP23188 793 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Fgf14P70379 247 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Micall2Q3TN34 1009 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Q3U7U4 132 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Krtcap2Q5RL79 136 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Khdrbs1Q60749 443 aaKnown RBP8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Muc19Q6JHY2 733 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Txndc15Q6P6J9 344 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Fbxl19Q6PB97 674 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 PrlhrQ6VMN6 370 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Nadsyn1Q711T7 725 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Avl9Q80U56 649 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Wipi2Q80W47 445 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Trmt2bQ8BQJ6 493 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Gk5Q8BX05 534 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Retreg1dQ8VE91 480 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Olfr53Q8VGL8 312 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Cers2Q924Z4 380 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 MINDY3Q9CV28 444 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Sp2Q9D2H6 612 aa8.41□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 31.9 ms