RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 PRDX1Q06830 199 aaKnown RBP12.36□□□□□ -0.43
CLK3-214ENST00000564096 SLBPQ14493 270 aaKnown RBP eCLIP12.36□□□□□ -0.43
CLK3-214ENST00000564096 SF1Q15637 639 aaKnown RBP12.36□□□□□ -0.43
CLK3-214ENST00000564096 SLC5A12Q1EHB4 618 aa12.36□□□□□ -0.43
CLK3-214ENST00000564096 CLEC6AQ6EIG7 209 aa12.36□□□□□ -0.43
CLK3-214ENST00000564096 SPESP1Q6UW49 350 aa12.36□□□□□ -0.43
CLK3-214ENST00000564096 NXPE4Q6UWF7 544 aa12.36□□□□□ -0.43
CLK3-214ENST00000564096 RNF165Q6ZSG1 346 aa12.36□□□□□ -0.43
CLK3-214ENST00000564096 ACAD11Q709F0 780 aa12.36□□□□□ -0.43
CLK3-214ENST00000564096 SFTPA2Q8IWL1 248 aa12.36□□□□□ -0.43
CLK3-214ENST00000564096 DDIASQ8IXT1 998 aa12.36□□□□□ -0.43
CLK3-214ENST00000564096 ADGRF3Q8IZF5 1079 aa12.36□□□□□ -0.43
CLK3-214ENST00000564096 DCBLD1Q8N8Z6 715 aa12.36□□□□□ -0.43
CLK3-214ENST00000564096 OR2L3Q8NG85 312 aa12.36□□□□□ -0.43
CLK3-214ENST00000564096 ZNF473Q8WTR7 871 aaKnown RBP12.36□□□□□ -0.43
CLK3-214ENST00000564096 STON2Q8WXE9 905 aa12.36□□□□□ -0.43
CLK3-214ENST00000564096 C19orf60Q96EN9 201 aa12.36□□□□□ -0.43
CLK3-214ENST00000564096 WDR34Q96EX3 536 aa12.36□□□□□ -0.43
CLK3-214ENST00000564096 ELAC2Q9BQ52 826 aaKnown RBP12.36□□□□□ -0.43
CLK3-214ENST00000564096 PLCD4Q9BRC7 762 aa12.36□□□□□ -0.43
CLK3-214ENST00000564096 EDEM2Q9BV94 578 aa12.36□□□□□ -0.43
CLK3-214ENST00000564096 RABEP2Q9H5N1 569 aa12.36□□□□□ -0.43
CLK3-214ENST00000564096 RIC8BQ9NVN3 520 aa12.36□□□□□ -0.43
CLK3-214ENST00000564096 HRASLS2Q9NWW9 162 aa12.36□□□□□ -0.43
CLK3-214ENST00000564096 PADI4Q9UM07 663 aa12.36□□□□□ -0.43
CLK3-214ENST00000564096 APOBEC2Q9Y235 224 aaKnown RBP12.36□□□□□ -0.43
CLK3-214ENST00000564096 PCDHGA11Q9Y5H2 935 aa12.36□□□□□ -0.43
CLK3-214ENST00000564096 RNF215Q9Y6U7 377 aa12.36□□□□□ -0.43
CLK3-214ENST00000564096 FANCMQ8IYD8 2048 aa12.36□□□□□ -0.43
CLK3-214ENST00000564096 A0A0J9YY10 115 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 TMEM233B4DJY2 109 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 H0YIV9 168 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 TRIM38O00635 465 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 PPP6CO00743 305 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 PPM1DO15297 605 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 SIGLEC6O43699 453 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 SNX3O60493 162 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 DIAPH2O60879 1101 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 VPS4BO75351 444 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 ULK1O75385 1050 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 GIMD1P0DJR0 217 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 C1GALT1C1LP0DN25 315 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 UGT2B7P16662 529 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 POLR2CP19387 275 aaPredicted RBP12.35□□□□□ -0.43
CLK3-214ENST00000564096 GSTM2P28161 218 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 PRDX3P30048 256 aaKnown RBP12.35□□□□□ -0.43
CLK3-214ENST00000564096 ARFIP2P53365 341 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 INHBCP55103 352 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 REEP5Q00765 189 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 SLC14A1Q13336 389 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 DOC2AQ14183 400 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 E2F2Q14209 437 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 NR1D2Q14995 579 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 CPSF6Q16630 551 aaKnown RBP eCLIP12.35□□□□□ -0.43
CLK3-214ENST00000564096 CGB2Q6NT52 195 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 MED27Q6P2C8 311 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 SLCO4C1Q6ZQN7 724 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 ZNF761Q86XN6 746 aaPredicted RBP12.35□□□□□ -0.43
CLK3-214ENST00000564096 CACNA2D3Q8IZS8 1091 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 EID2Q8N6I1 236 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 LMNTD1Q8N9Z9 388 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 CCDC197Q8NCU1 140 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 ABHD11Q8NFV4 315 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 TTLQ8NG68 377 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 OR2A1Q8NGT9 310 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 OR2I1PQ8NGU4 316 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 RSC1A1Q92681 617 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 APOLD1Q96LR9 279 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 KCNA7Q96RP8 456 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 CD180Q99467 661 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 TBC1D10AQ9BXI6 508 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 NUF2Q9BZD4 464 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 SPHK1Q9NYA1 384 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 DCTN4Q9UJW0 460 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 POMT2Q9UKY4 750 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 SNX7Q9UNH6 387 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 RNF11Q9Y3C5 154 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 HCN4Q9Y3Q4 1203 aa12.35□□□□□ -0.43
CLK3-214ENST00000564096 CACNA1EQ15878 2313 aa12.34□□□□□ -0.43
CLK3-214ENST00000564096 FFAR3O14843 346 aa12.34□□□□□ -0.43
CLK3-214ENST00000564096 PIP5K1BO14986 540 aa12.34□□□□□ -0.43
CLK3-214ENST00000564096 GPR42O15529 346 aa12.34□□□□□ -0.43
CLK3-214ENST00000564096 WFS1O76024 890 aa12.34□□□□□ -0.43
CLK3-214ENST00000564096 HSD3B1P14060 373 aa12.34□□□□□ -0.43
CLK3-214ENST00000564096 EZRP15311 586 aaKnown RBP12.34□□□□□ -0.43
CLK3-214ENST00000564096 HSD3B2P26439 372 aa12.34□□□□□ -0.43
CLK3-214ENST00000564096 VARSP26640 1264 aaKnown RBP12.34□□□□□ -0.43
CLK3-214ENST00000564096 PEBP1P30086 187 aaKnown RBP12.34□□□□□ -0.43
CLK3-214ENST00000564096 ZRSR2Q15696 482 aaKnown RBP12.34□□□□□ -0.43
CLK3-214ENST00000564096 CSRP2Q16527 193 aa12.34□□□□□ -0.43
CLK3-214ENST00000564096 IMPG1Q17R60 797 aa12.34□□□□□ -0.43
CLK3-214ENST00000564096 AASDHQ4L235 1098 aaPredicted RBP12.34□□□□□ -0.43
CLK3-214ENST00000564096 FRG2Q64ET8 278 aa12.34□□□□□ -0.43
CLK3-214ENST00000564096 IRGCQ6NXR0 463 aa12.34□□□□□ -0.43
CLK3-214ENST00000564096 CARFQ8N187 725 aa12.34□□□□□ -0.43
CLK3-214ENST00000564096 SELENOMQ8WWX9 145 aa12.34□□□□□ -0.43
CLK3-214ENST00000564096 CCDC74AQ96AQ1 378 aa12.34□□□□□ -0.43
CLK3-214ENST00000564096 THOC1Q96FV9 657 aaKnown RBP12.34□□□□□ -0.43
CLK3-214ENST00000564096 ZDHHC12Q96GR4 267 aa12.34□□□□□ -0.43
CLK3-214ENST00000564096 SEC16BQ96JE7 1060 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms