RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 C1orf186Q6ZWK4 172 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 UTS2BQ765I0 119 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 MEPCEQ7L2J0 689 aaKnown RBP1.96□□□□□ -2.1
RTF1-207ENST00000561076 ERASQ7Z444 233 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 ARHGAP22Q7Z5H3 698 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 ASPGQ86U10 573 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 CD163Q86VB7 1156 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 VPS36Q86VN1 386 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 ZC3HC1Q86WB0 502 aaKnown RBP1.96□□□□□ -2.1
RTF1-207ENST00000561076 TGIF2LXQ8IUE1 241 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 SFTPA2Q8IWL1 248 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 MB21D2Q8IYB1 491 aaPredicted RBP1.96□□□□□ -2.1
RTF1-207ENST00000561076 CDK20Q8IZL9 346 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 GCNT2Q8N0V5 402 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 LGI4Q8N135 537 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 CARFQ8N187 725 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 SLC43A2Q8N370 569 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 COMMD1Q8N668 190 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 SLC5A8Q8N695 610 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 HORMAD2Q8N7B1 307 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 RASGEF1AQ8N9B8 481 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 TERB1Q8NA31 727 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 Q8NA96 180 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 C8orf58Q8NAV2 365 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 SMYD1Q8NB12 490 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 CPEB3Q8NE35 698 aaKnown RBP1.96□□□□□ -2.1
RTF1-207ENST00000561076 SPATA4Q8NEY3 305 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 BPIFCQ8NFQ6 507 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 OR4N2Q8NGD1 307 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 VANGL1Q8TAA9 524 aaPredicted RBP1.96□□□□□ -2.1
RTF1-207ENST00000561076 SLC2A14Q8TDB8 520 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 ADAMTS17Q8TE56 1095 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 WIPF2Q8TF74 440 aaPredicted RBP1.96□□□□□ -2.1
RTF1-207ENST00000561076 SSMEM1Q8WWF3 244 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 ADAMTS14Q8WXS8 1223 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 PHYHIPQ92561 330 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 APBB2Q92870 758 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 NCLNQ969V3 563 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 RFT1Q96AA3 541 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 LENG9Q96B70 501 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 C19orf60Q96EN9 201 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 FAM89AQ96GI7 184 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 SIGLEC10Q96LC7 697 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 PRICKLE1Q96MT3 831 aaPredicted RBP1.96□□□□□ -2.1
RTF1-207ENST00000561076 RPRD1AQ96P16 312 aaPredicted RBP1.96□□□□□ -2.1
RTF1-207ENST00000561076 TSSK2Q96PF2 358 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 VPS35Q96QK1 796 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 GFM1Q96RP9 751 aaKnown RBP1.96□□□□□ -2.1
RTF1-207ENST00000561076 KRT12Q99456 494 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 CITED1Q99966 193 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 BCL7BQ9BQE9 202 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 C11orf70Q9BRQ4 267 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 LMF2Q9BU23 707 aaKnown RBP1.96□□□□□ -2.1
RTF1-207ENST00000561076 MSTO1Q9BUK6 570 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 EDEM2Q9BV94 578 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 NUP58Q9BVL2 599 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 SGPP1Q9BX95 441 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 GON7Q9BXV9 100 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 LRRC2Q9BYS8 371 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 SIRPDQ9H106 197 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 DPAGT1Q9H3H5 408 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 ZNF768Q9H5H4 540 aaKnown RBP1.96□□□□□ -2.1
RTF1-207ENST00000561076 PPP1R3EQ9H7J1 279 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 SYNDIG1Q9H7V2 258 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 METTL7AQ9H8H3 244 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 SEC61A2Q9H9S3 476 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 FN3KRPQ9HA64 309 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 POLD4Q9HCU8 107 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 TXNRD2Q9NNW7 524 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 KCNMB3Q9NPA1 279 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 AKIP1Q9NQ31 210 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 HPS4Q9NQG7 708 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 GSN-AS1Q9NRJ2 163 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 GPR173Q9NS66 373 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 ECHDC1Q9NTX5 307 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 FAM120CQ9NX05 1096 aaKnown RBP1.96□□□□□ -2.1
RTF1-207ENST00000561076 RDH8Q9NYR8 311 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 SPATA7Q9P0W8 599 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 PLEKHB1Q9UF11 243 aaPredicted RBP1.96□□□□□ -2.1
RTF1-207ENST00000561076 NARFQ9UHQ1 456 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 RAPGEFL1Q9UHV5 662 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 PCDHA7Q9UN72 937 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 ERVK-19Q9WJR5 959 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 NCKAP1Q9Y2A7 1128 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 MAB21L2Q9Y586 359 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 DUSP10Q9Y6W6 482 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 MST1RQ04912 1400 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 DISP3Q9P2K9 1392 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 MAST3O60307 1309 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 SF3B1O75533 1304 aaKnown RBP eCLIP1.95□□□□□ -2.1
RTF1-207ENST00000561076 ADGRA2Q96PE1 1338 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 ZNF541Q9H0D2 1346 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 PTCH1Q13635 1447 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 A0A087WUV0 522 aaPredicted RBP1.95□□□□□ -2.1
RTF1-207ENST00000561076 A0A0U1RQF3 1178 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 A0A0U1RQS6 177 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 HYKKA2RU49 373 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 ARHGEF35A5YM69 484 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 NPEPPSL1A6NEC2 478 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 MFSD2BA6NFX1 497 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms