RNA–Protein interactions for RNA: ENST00000556210.1

CUX1-215, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-215ENST00000556210 RTCAO00442 366 aaKnown RBP14.42□□□□□ -0.1
CUX1-215ENST00000556210 EEDO75530 441 aaKnown RBP14.42□□□□□ -0.1
CUX1-215ENST00000556210 FABP3P05413 133 aa14.42□□□□□ -0.1
CUX1-215ENST00000556210 RPS13P62277 151 aaKnown RBP14.42□□□□□ -0.1
CUX1-215ENST00000556210 EPS8Q12929 822 aa14.42□□□□□ -0.1
CUX1-215ENST00000556210 GPR33Q49SQ1 333 aa14.42□□□□□ -0.1
CUX1-215ENST00000556210 NIPAL1Q6NVV3 410 aa14.42□□□□□ -0.1
CUX1-215ENST00000556210 ZNF605Q86T29 641 aa14.42□□□□□ -0.1
CUX1-215ENST00000556210 PDPRQ8NCN5 879 aa14.42□□□□□ -0.1
CUX1-215ENST00000556210 ARMC1Q9NVT9 282 aa14.42□□□□□ -0.1
CUX1-215ENST00000556210 IGLV3-10A0A075B6K4 115 aa14.42□□□□□ -0.1
CUX1-215ENST00000556210 CACNG3O60359 315 aa14.42□□□□□ -0.1
CUX1-215ENST00000556210 NDUFS2O75306 463 aa14.42□□□□□ -0.1
CUX1-215ENST00000556210 PCCBP05166 539 aa14.42□□□□□ -0.1
CUX1-215ENST00000556210 KLK1P06870 262 aa14.42□□□□□ -0.1
CUX1-215ENST00000556210 SRCP12931 536 aa14.42□□□□□ -0.1
CUX1-215ENST00000556210 MANFP55145 182 aaKnown RBP14.42□□□□□ -0.1
CUX1-215ENST00000556210 GALNT1Q10472 559 aaPredicted RBP14.42□□□□□ -0.1
CUX1-215ENST00000556210 SLBPQ14493 270 aaKnown RBP eCLIP14.42□□□□□ -0.1
CUX1-215ENST00000556210 INO80DQ53TQ3 878 aaPredicted RBP14.42□□□□□ -0.1
CUX1-215ENST00000556210 NOXRED1Q6NXP6 359 aa14.42□□□□□ -0.1
CUX1-215ENST00000556210 THOC6Q86W42 341 aaKnown RBP14.42□□□□□ -0.1
CUX1-215ENST00000556210 S100ZQ8WXG8 99 aa14.42□□□□□ -0.1
CUX1-215ENST00000556210 SGCDQ92629 289 aa14.42□□□□□ -0.1
CUX1-215ENST00000556210 ZHX1-C8orf76Q96EF9 292 aa14.42□□□□□ -0.1
CUX1-215ENST00000556210 MCMBPQ9BTE3 642 aa14.42□□□□□ -0.1
CUX1-215ENST00000556210 MIR1-1HGQ9H1L0 117 aa14.42□□□□□ -0.1
CUX1-215ENST00000556210 TDP1Q9NUW8 608 aa14.42□□□□□ -0.1
CUX1-215ENST00000556210 C5AR2Q9P296 337 aa14.42□□□□□ -0.1
CUX1-215ENST00000556210 PTPRFP10586 1907 aa14.42□□□□□ -0.1
CUX1-215ENST00000556210 LOC100130705A0A1B0GUX0 176 aa14.42□□□□□ -0.1
CUX1-215ENST00000556210 GLOD5A6NK44 160 aa14.42□□□□□ -0.1
CUX1-215ENST00000556210 WASH3PC4AMC7 463 aa14.42□□□□□ -0.1
CUX1-215ENST00000556210 HSD17B1P14061 328 aa14.42□□□□□ -0.1
CUX1-215ENST00000556210 CTSKP43235 329 aa14.42□□□□□ -0.1
CUX1-215ENST00000556210 INPP1P49441 399 aa14.42□□□□□ -0.1
CUX1-215ENST00000556210 C6orf183Q5T699 404 aa14.42□□□□□ -0.1
CUX1-215ENST00000556210 LYPLAL1Q5VWZ2 237 aa14.42□□□□□ -0.1
CUX1-215ENST00000556210 SNX29P2Q8IUI4 249 aa14.42□□□□□ -0.1
CUX1-215ENST00000556210 SETD9Q8NE22 299 aa14.42□□□□□ -0.1
CUX1-215ENST00000556210 GPR150Q8NGU9 434 aa14.42□□□□□ -0.1
CUX1-215ENST00000556210 RHBDF1Q96CC6 855 aa14.42□□□□□ -0.1
CUX1-215ENST00000556210 POPDC3Q9HBV1 291 aa14.42□□□□□ -0.1
CUX1-215ENST00000556210 ELOVL2Q9NXB9 296 aa14.42□□□□□ -0.1
CUX1-215ENST00000556210 LHX3Q9UBR4 397 aa14.42□□□□□ -0.1
CUX1-215ENST00000556210 RPS6KA6Q9UK32 745 aa14.42□□□□□ -0.1
CUX1-215ENST00000556210 SAMD4AQ9UPU9 718 aaKnown RBP14.42□□□□□ -0.1
CUX1-215ENST00000556210 M0R129 80 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 TULP3O75386 442 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 SCELO95171 688 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 HLA-FP30511 346 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 PSMD8P48556 350 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 HLCSP50747 726 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 ALDH3A2P51648 485 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 DEFA1P59665 94 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 DEFA3P59666 94 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 RPS26P62854 115 aaKnown RBP14.41□□□□□ -0.1
CUX1-215ENST00000556210 TYSND1Q2T9J0 566 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.41□□□□□ -0.18e-7■■■■■ 33
CUX1-215ENST00000556210 LCN8Q6JVE9 175 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 CCDC80Q76M96 950 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 PIWIL3Q7Z3Z3 882 aaKnown RBP14.41□□□□□ -0.1
CUX1-215ENST00000556210 TICAM1Q8IUC6 712 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 VRK3Q8IV63 474 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 OR8H2Q8N162 312 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 IL4I1Q96RQ9 567 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 KLF16Q9BXK1 252 aaPredicted RBP14.41□□□□□ -0.1
CUX1-215ENST00000556210 TPT1P8Q9HAU6 139 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 M0QX08 132 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 OR7A17O14581 309 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 OR10H3O60404 316 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 HMGA1P17096 107 aaKnown RBP14.41□□□□□ -0.1
CUX1-215ENST00000556210 VIPR2P41587 438 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 TRAF3Q13114 568 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 PON2Q15165 354 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 ALDH16A1Q8IZ83 802 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 ARMC5Q96C12 935 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 PKP4Q99569 1192 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 P2RY13Q9BPV8 354 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 SEZ6LQ9BYH1 1024 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 TNFRSF11BO00300 401 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 PCDH7O60245 1069 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 SLC16A8O95907 504 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 EIF2S1P05198 315 aaKnown RBP14.41□□□□□ -0.1
CUX1-215ENST00000556210 EBLN1P0CF75 366 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 CCL5P13501 91 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 TNNI3P19429 210 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 CNTN1Q12860 1018 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 TOP3AQ13472 1001 aaPredicted RBP14.41□□□□□ -0.1
CUX1-215ENST00000556210 TYW3Q6IPR3 259 aaKnown RBP14.41□□□□□ -0.1
CUX1-215ENST00000556210 CAPN13Q6MZZ7 669 aaPredicted RBP14.41□□□□□ -0.1
CUX1-215ENST00000556210 GAREM2Q75VX8 874 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 SCML4Q8N228 414 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 PSD4Q8NDX1 1056 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 MCFD2Q8NI22 146 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 SLC46A2Q9BY10 475 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 POLE4Q9NR33 117 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 AGPAT4Q9NRZ5 378 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 ZNF225Q9UK10 706 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 NEU3Q9UQ49 428 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms