RNA–Protein interactions for RNA: ENST00000554336.5

TUBB3-205, Transcript of tubulin beta 3 class III, humanhuman

TSL 3 BASIC

Gene TUBB3, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-205ENST00000554336 TRAPPC9Q96Q05 1148 aa16.57■□□□□ 0.24
TUBB3-205ENST00000554336 SMC6Q96SB8 1091 aa16.57■□□□□ 0.24
TUBB3-205ENST00000554336 DPYSL5Q9BPU6 564 aa16.57■□□□□ 0.24
TUBB3-205ENST00000554336 SYNPO2LQ9H987 977 aa16.57■□□□□ 0.24
TUBB3-205ENST00000554336 GRID1Q9ULK0 1009 aa16.57■□□□□ 0.24
TUBB3-205ENST00000554336 SLC22A14Q9Y267 594 aa16.57■□□□□ 0.24
TUBB3-205ENST00000554336 PLLPQ9Y342 182 aa16.57■□□□□ 0.24
TUBB3-205ENST00000554336 SLC9B1P1A6NJY1 282 aa16.56■□□□□ 0.24
TUBB3-205ENST00000554336 HCRTR1O43613 425 aa16.56■□□□□ 0.24
TUBB3-205ENST00000554336 DLX3O60479 287 aa16.56■□□□□ 0.24
TUBB3-205ENST00000554336 PRAMEF4O60810 478 aa16.56■□□□□ 0.24
TUBB3-205ENST00000554336 RASSF9O75901 435 aa16.56■□□□□ 0.24
TUBB3-205ENST00000554336 C1QL1O75973 258 aa16.56■□□□□ 0.24
TUBB3-205ENST00000554336 GFAPP14136 432 aa16.56■□□□□ 0.24
TUBB3-205ENST00000554336 CDH3P22223 829 aa16.56■□□□□ 0.24
TUBB3-205ENST00000554336 RPA3P35244 121 aaPredicted RBP16.56■□□□□ 0.24
TUBB3-205ENST00000554336 SEPHS1P49903 392 aa16.56■□□□□ 0.24
TUBB3-205ENST00000554336 GABREP78334 506 aa16.56■□□□□ 0.24
TUBB3-205ENST00000554336 SF1Q15637 639 aaKnown RBP16.56■□□□□ 0.24
TUBB3-205ENST00000554336 PRAMEF9Q5VWM5 478 aa16.56■□□□□ 0.24
TUBB3-205ENST00000554336 FCRL6Q6DN72 434 aa16.56■□□□□ 0.24
TUBB3-205ENST00000554336 CAPN13Q6MZZ7 669 aaPredicted RBP16.56■□□□□ 0.24
TUBB3-205ENST00000554336 LCTLQ6UWM7 567 aa16.56■□□□□ 0.24
TUBB3-205ENST00000554336 THOC6Q86W42 341 aaKnown RBP16.56■□□□□ 0.24
TUBB3-205ENST00000554336 TCAIMQ8N3R3 496 aa16.56■□□□□ 0.24
TUBB3-205ENST00000554336 TCP10LQ8TDR4 215 aa16.56■□□□□ 0.24
TUBB3-205ENST00000554336 KLHL6Q8WZ60 621 aa16.56■□□□□ 0.24
TUBB3-205ENST00000554336 SLC39A7Q92504 469 aa16.56■□□□□ 0.24
TUBB3-205ENST00000554336 SLC41A2Q96JW4 573 aa16.56■□□□□ 0.24
TUBB3-205ENST00000554336 FAM111AQ96PZ2 611 aa16.56■□□□□ 0.24
TUBB3-205ENST00000554336 DEPDC7Q96QD5 511 aa16.56■□□□□ 0.24
TUBB3-205ENST00000554336 ZNF768Q9H5H4 540 aaKnown RBP16.56■□□□□ 0.24
TUBB3-205ENST00000554336 SSU72Q9NP77 194 aaKnown RBP16.56■□□□□ 0.24
TUBB3-205ENST00000554336 ACSS2Q9NR19 701 aa16.56■□□□□ 0.24
TUBB3-205ENST00000554336 C1GALT1Q9NS00 363 aa16.56■□□□□ 0.24
TUBB3-205ENST00000554336 PCDHB11Q9Y5F2 797 aa16.56■□□□□ 0.24
TUBB3-205ENST00000554336 ACTL7BQ9Y614 415 aa16.56■□□□□ 0.24
TUBB3-205ENST00000554336 MGAQ8IWI9 3026 aa16.55■□□□□ 0.24
TUBB3-205ENST00000554336 ATXN7O15265 892 aaPredicted RBP16.55■□□□□ 0.24
TUBB3-205ENST00000554336 IPO13O94829 963 aaKnown RBP16.55■□□□□ 0.24
TUBB3-205ENST00000554336 WDR47O94967 919 aa16.55■□□□□ 0.24
TUBB3-205ENST00000554336 S100BP04271 92 aaPredicted RBP16.55■□□□□ 0.24
TUBB3-205ENST00000554336 GRIA3P42263 894 aa16.55■□□□□ 0.24
TUBB3-205ENST00000554336 ETV4P43268 484 aa16.55■□□□□ 0.24
TUBB3-205ENST00000554336 ALDH18A1P54886 795 aaKnown RBP16.55■□□□□ 0.24
TUBB3-205ENST00000554336 MAGOHP61326 146 aaKnown RBP16.55■□□□□ 0.24
TUBB3-205ENST00000554336 NFKB2Q00653 900 aa16.55■□□□□ 0.24
TUBB3-205ENST00000554336 PRDX1Q06830 199 aaKnown RBP16.55■□□□□ 0.24
TUBB3-205ENST00000554336 KCNAB1Q14722 419 aa16.55■□□□□ 0.24
TUBB3-205ENST00000554336 PCLAFQ15004 111 aa16.55■□□□□ 0.24
TUBB3-205ENST00000554336 THEMIS2Q5TEJ8 643 aa16.55■□□□□ 0.24
TUBB3-205ENST00000554336 AGBL2Q5U5Z8 902 aa16.55■□□□□ 0.24
TUBB3-205ENST00000554336 ZYG11AQ6WRX3 759 aa16.55■□□□□ 0.24
TUBB3-205ENST00000554336 RPS27LQ71UM5 84 aaKnown RBP16.55■□□□□ 0.24
TUBB3-205ENST00000554336 ARMC2Q8NEN0 867 aa16.55■□□□□ 0.24
TUBB3-205ENST00000554336 NEIL2Q969S2 332 aa16.55■□□□□ 0.24
TUBB3-205ENST00000554336 SLC22A18Q96BI1 424 aa16.55■□□□□ 0.24
TUBB3-205ENST00000554336 PHF21BQ96EK2 531 aa16.55■□□□□ 0.24
TUBB3-205ENST00000554336 MOCOSQ96EN8 888 aa16.55■□□□□ 0.24
TUBB3-205ENST00000554336 TMEM74Q96NL1 305 aa16.55■□□□□ 0.24
TUBB3-205ENST00000554336 TMEM237Q96Q45 408 aa16.55■□□□□ 0.24
TUBB3-205ENST00000554336 CD244Q9BZW8 370 aa16.55■□□□□ 0.24
TUBB3-205ENST00000554336 FAM60AQ9NP50 221 aa16.55■□□□□ 0.24
TUBB3-205ENST00000554336 SIDT1Q9NXL6 827 aaKnown RBP16.55■□□□□ 0.24
TUBB3-205ENST00000554336 KLK4Q9Y5K2 254 aa16.55■□□□□ 0.24
TUBB3-205ENST00000554336 SPTBP11277 2137 aa16.54■□□□□ 0.24
TUBB3-205ENST00000554336 GOLGA6L10A6NI86 522 aa16.54■□□□□ 0.24
TUBB3-205ENST00000554336 STX16-NPEPL1H3BU86 382 aa16.54■□□□□ 0.24
TUBB3-205ENST00000554336 E2F3O00716 465 aa16.54■□□□□ 0.24
TUBB3-205ENST00000554336 STX16O14662 325 aa16.54■□□□□ 0.24
TUBB3-205ENST00000554336 TOX3O15405 576 aaPredicted RBP16.54■□□□□ 0.24
TUBB3-205ENST00000554336 STK16O75716 305 aa16.54■□□□□ 0.24
TUBB3-205ENST00000554336 RPS17P08708 135 aaKnown RBP16.54■□□□□ 0.24
TUBB3-205ENST00000554336 HGFP14210 728 aa16.54■□□□□ 0.24
TUBB3-205ENST00000554336 NELFEP18615 380 aaKnown RBP16.54■□□□□ 0.24
TUBB3-205ENST00000554336 CCND1P24385 295 aa16.54■□□□□ 0.24
TUBB3-205ENST00000554336 GABRA4P48169 554 aa16.54■□□□□ 0.24
TUBB3-205ENST00000554336 CXADRP78310 365 aa16.54■□□□□ 0.24
TUBB3-205ENST00000554336 SH3BP2P78314 561 aa16.54■□□□□ 0.24
TUBB3-205ENST00000554336 TRA2AQ13595 282 aaKnown RBP eCLIP16.54■□□□□ 0.24
TUBB3-205ENST00000554336 PCBP2Q15366 365 aaKnown RBP eCLIP16.54■□□□□ 0.242e-6■■□□□ 13.3
TUBB3-205ENST00000554336 CCDC153Q494R4 210 aa16.54■□□□□ 0.24
TUBB3-205ENST00000554336 ZNF425Q6IV72 752 aa16.54■□□□□ 0.24
TUBB3-205ENST00000554336 LRRC70Q7Z2Q7 622 aa16.54■□□□□ 0.24
TUBB3-205ENST00000554336 CARFQ8N187 725 aa16.54■□□□□ 0.24
TUBB3-205ENST00000554336 BMPERQ8N8U9 685 aa16.54■□□□□ 0.24
TUBB3-205ENST00000554336 C19orf47Q8N9M1 422 aaKnown RBP16.54■□□□□ 0.24
TUBB3-205ENST00000554336 LIN37Q96GY3 246 aaPredicted RBP16.54■□□□□ 0.24
TUBB3-205ENST00000554336 ATP6V1G3Q96LB4 118 aa16.54■□□□□ 0.24
TUBB3-205ENST00000554336 NSUN5Q96P11 429 aaKnown RBP16.54■□□□□ 0.24
TUBB3-205ENST00000554336 DPH7Q9BTV6 452 aa16.54■□□□□ 0.24
TUBB3-205ENST00000554336 SPNS1Q9H2V7 528 aa16.54■□□□□ 0.24
TUBB3-205ENST00000554336 COPG2Q9UBF2 871 aa16.54■□□□□ 0.24
TUBB3-205ENST00000554336 BTRCQ9Y297 605 aa16.54■□□□□ 0.24
TUBB3-205ENST00000554336 KALRNO60229 2985 aa16.54■□□□□ 0.24
TUBB3-205ENST00000554336 OR2A25A4D2G3 310 aa16.53■□□□□ 0.24
TUBB3-205ENST00000554336 HGSO14964 777 aaPredicted RBP16.53■□□□□ 0.24
TUBB3-205ENST00000554336 PRPF4O43172 522 aaKnown RBP eCLIP16.53■□□□□ 0.243e-7■■■□□ 16.7
TUBB3-205ENST00000554336 CCNT2O60583 730 aaKnown RBP16.53■□□□□ 0.24
TUBB3-205ENST00000554336 CTSVO60911 334 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms