RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 KERAO60938 352 aa11.86□□□□□ -0.51
NR4A1-215ENST00000550557 AQP1P29972 269 aa11.86□□□□□ -0.51
NR4A1-215ENST00000550557 HOXC13P31276 330 aa11.86□□□□□ -0.51
NR4A1-215ENST00000550557 CNPY1Q3B7I2 92 aa11.86□□□□□ -0.51
NR4A1-215ENST00000550557 EGFLAMQ63HQ2 1017 aa11.86□□□□□ -0.51
NR4A1-215ENST00000550557 LRRC70Q7Z2Q7 622 aa11.86□□□□□ -0.51
NR4A1-215ENST00000550557 OR4K17Q8NGC6 315 aa11.86□□□□□ -0.51
NR4A1-215ENST00000550557 NAT6Q93015 286 aa11.86□□□□□ -0.51
NR4A1-215ENST00000550557 IMP4Q96G21 291 aaKnown RBP11.86□□□□□ -0.51
NR4A1-215ENST00000550557 DIABLOQ9NR28 239 aa11.86□□□□□ -0.51
NR4A1-215ENST00000550557 PNPLA3Q9NST1 481 aa11.86□□□□□ -0.51
NR4A1-215ENST00000550557 CHRM1P11229 460 aaPredicted RBP11.86□□□□□ -0.51
NR4A1-215ENST00000550557 PTX3P26022 381 aaPredicted RBP11.86□□□□□ -0.51
NR4A1-215ENST00000550557 CLCN7P51798 805 aa11.86□□□□□ -0.51
NR4A1-215ENST00000550557 TOP3AQ13472 1001 aaPredicted RBP11.86□□□□□ -0.51
NR4A1-215ENST00000550557 FGL2Q14314 439 aa11.86□□□□□ -0.51
NR4A1-215ENST00000550557 ZBTB6Q15916 424 aa11.86□□□□□ -0.51
NR4A1-215ENST00000550557 FAM182AQ5T1J6 154 aa11.86□□□□□ -0.51
NR4A1-215ENST00000550557 TMEM173Q86WV6 379 aaPredicted RBP11.86□□□□□ -0.51
NR4A1-215ENST00000550557 DCP2Q8IU60 420 aaKnown RBP11.86□□□□□ -0.51
NR4A1-215ENST00000550557 METTL27Q8N6F8 245 aaPredicted RBP11.86□□□□□ -0.51
NR4A1-215ENST00000550557 SLC5A11Q8WWX8 675 aa11.86□□□□□ -0.51
NR4A1-215ENST00000550557 TDRD1Q9BXT4 1180 aaKnown RBP11.86□□□□□ -0.51
NR4A1-215ENST00000550557 PAIP1Q9H074 479 aaKnown RBP11.86□□□□□ -0.51
NR4A1-215ENST00000550557 RNF38Q9H0F5 515 aa11.86□□□□□ -0.51
NR4A1-215ENST00000550557 NECTIN3Q9NQS3 549 aa11.86□□□□□ -0.51
NR4A1-215ENST00000550557 POMPQ9Y244 141 aa11.86□□□□□ -0.51
NR4A1-215ENST00000550557 MYL12AP19105 171 aa11.86□□□□□ -0.51
NR4A1-215ENST00000550557 MSX2P35548 267 aaPredicted RBP11.86□□□□□ -0.51
NR4A1-215ENST00000550557 TALDO1P37837 337 aa11.86□□□□□ -0.51
NR4A1-215ENST00000550557 GRIA3P42263 894 aa11.86□□□□□ -0.51
NR4A1-215ENST00000550557 NCBP2P52298 156 aaKnown RBP eCLIP11.86□□□□□ -0.51
NR4A1-215ENST00000550557 DEFB133Q30KQ1 61 aa11.86□□□□□ -0.51
NR4A1-215ENST00000550557 ARL13AQ5H913 290 aaPredicted RBP11.86□□□□□ -0.51
NR4A1-215ENST00000550557 PLEKHS1Q5SXH7 462 aa11.86□□□□□ -0.51
NR4A1-215ENST00000550557 ZNF648Q5T619 568 aaPredicted RBP11.86□□□□□ -0.51
NR4A1-215ENST00000550557 TLDC1Q6P9B6 456 aa11.86□□□□□ -0.51
NR4A1-215ENST00000550557 TIFABQ6ZNK6 161 aa11.86□□□□□ -0.51
NR4A1-215ENST00000550557 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.86□□□□□ -0.51
NR4A1-215ENST00000550557 UBALD2Q8IYN6 164 aa11.86□□□□□ -0.51
NR4A1-215ENST00000550557 RORBQ92753 470 aa11.86□□□□□ -0.51
NR4A1-215ENST00000550557 NPAS2Q99743 824 aa11.86□□□□□ -0.51
NR4A1-215ENST00000550557 KLRF1Q9NZS2 232 aa11.86□□□□□ -0.51
NR4A1-215ENST00000550557 CNOT6Q9ULM6 557 aaKnown RBP11.86□□□□□ -0.51
NR4A1-215ENST00000550557 CEP290O15078 2479 aa11.86□□□□□ -0.51
NR4A1-215ENST00000550557 IL6P05231 212 aa11.86□□□□□ -0.51
NR4A1-215ENST00000550557 DPYSQ14117 519 aa11.86□□□□□ -0.51
NR4A1-215ENST00000550557 TRIM61Q5EBN2 209 aa11.86□□□□□ -0.51
NR4A1-215ENST00000550557 VANGL1Q8TAA9 524 aaPredicted RBP11.86□□□□□ -0.51
NR4A1-215ENST00000550557 ZNF483Q8TF39 744 aaPredicted RBP11.86□□□□□ -0.51
NR4A1-215ENST00000550557 PRR11Q96HE9 360 aaPredicted RBP11.86□□□□□ -0.51
NR4A1-215ENST00000550557 UHRF1Q96T88 793 aaPredicted RBP11.86□□□□□ -0.51
NR4A1-215ENST00000550557 ZCCHC3Q9NUD5 404 aaKnown RBP11.86□□□□□ -0.51
NR4A1-215ENST00000550557 WASH3PC4AMC7 463 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 XKRYO14609 159 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 TLX3O43711 291 aaPredicted RBP11.85□□□□□ -0.51
NR4A1-215ENST00000550557 HOXD8P13378 290 aaPredicted RBP11.85□□□□□ -0.51
NR4A1-215ENST00000550557 CASP9P55211 416 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 SNTA1Q13424 505 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 NEDD8Q15843 81 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 PTCHD3Q3KNS1 767 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 TIMM50Q3ZCQ8 353 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 ZNF781Q8N8C0 355 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 TRIM63Q969Q1 353 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 DEPDC7Q96QD5 511 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 GATA5Q9BWX5 397 aaPredicted RBP11.85□□□□□ -0.51
NR4A1-215ENST00000550557 SERINC1Q9NRX5 453 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 TAF1LQ8IZX4 1826 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 PAPPA2Q9BXP8 1791 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 PAPSS2O95340 614 aaPredicted RBP11.85□□□□□ -0.51
NR4A1-215ENST00000550557 CXCL10P02778 98 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 HSMCR30P0CW71 290 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 HOXB6P17509 224 aaKnown RBP11.85□□□□□ -0.51
NR4A1-215ENST00000550557 DGUOKQ16854 277 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 KLHL24Q6TFL4 600 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 SMYD1Q8NB12 490 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 JPH3Q8WXH2 748 aaPredicted RBP11.85□□□□□ -0.51
NR4A1-215ENST00000550557 SLC35G5Q96KT7 338 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 SLC38A2Q96QD8 506 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 OR8D2Q9GZM6 311 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 VPS29Q9UBQ0 182 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 LOXHD1Q8IVV2 1947 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 HMGB3O15347 200 aaKnown RBP11.85□□□□□ -0.51
NR4A1-215ENST00000550557 PROS1P07225 676 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 GIMD1P0DJR0 217 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 SAGP10523 405 aaPredicted RBP11.85□□□□□ -0.51
NR4A1-215ENST00000550557 ITGB7P26010 798 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 IDH2P48735 452 aaKnown RBP11.85□□□□□ -0.51
NR4A1-215ENST00000550557 ITGA1P56199 1179 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 NFKB2Q00653 900 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 BROXQ5VW32 411 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 CDC73Q6P1J9 531 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 SATL1Q86VE3 508 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 AMIGO1Q86WK6 493 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 OFCC1Q8IZS5 231 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 PGAM4Q8N0Y7 254 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 EEF1AKMT1Q8WVE0 214 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 SLC7A6OSQ96CW6 309 aaPredicted RBP11.85□□□□□ -0.51
NR4A1-215ENST00000550557 LRRC46Q96FV0 321 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 C1orf21Q9H246 121 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms