RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 AGAP14A8MT82 685 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 FADS2P1A8MWK0 482 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 ANGPTL1O95841 491 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 OR56A5P0C7T3 313 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 PCMT1P22061 227 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 PDHA2P29803 388 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 CRYBA2P53672 197 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 VBP1P61758 197 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 SNRPD1P62314 119 aaKnown RBP13.63□□□□□ -0.23
UBE3B-210ENST00000539599 IRF8Q02556 426 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 NAE1Q13564 534 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 CBX2Q14781 532 aaPredicted RBP13.63□□□□□ -0.23
UBE3B-210ENST00000539599 TMEM236Q5W0B7 351 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 TMEM215Q68D42 235 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 ANGPTL8Q6UXH0 198 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 ZNF852Q6ZMS4 543 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 PRR23BQ6ZRT6 265 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 PTOV1Q86YD1 416 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 CCDC71Q8IV32 467 aaPredicted RBP13.63□□□□□ -0.23
UBE3B-210ENST00000539599 LEMD2Q8NC56 503 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 MRPS31Q92665 395 aaKnown RBP13.63□□□□□ -0.23
UBE3B-210ENST00000539599 RPL3LQ92901 407 aaKnown RBP13.63□□□□□ -0.23
UBE3B-210ENST00000539599 HSH2DQ96JZ2 352 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 NODALQ96S42 347 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 C8orf4Q9NR00 106 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 TMEM184CQ9NVA4 438 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 SNX6Q9UNH7 406 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 SH2B3Q9UQQ2 575 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 ARHGEF33A8MVX0 844 aa13.62□□□□□ -0.23
UBE3B-210ENST00000539599 ZNF701M0R085 212 aaPredicted RBP13.62□□□□□ -0.23
UBE3B-210ENST00000539599 ERN1O75460 977 aaKnown RBP13.62□□□□□ -0.23
UBE3B-210ENST00000539599 KCNK5O95279 499 aa13.62□□□□□ -0.23
UBE3B-210ENST00000539599 FUCA1P04066 466 aa13.62□□□□□ -0.23
UBE3B-210ENST00000539599 ATP1B2P14415 290 aaPredicted RBP13.62□□□□□ -0.23
UBE3B-210ENST00000539599 GSTM2P28161 218 aa13.62□□□□□ -0.23
UBE3B-210ENST00000539599 MEF2AQ02078 507 aaPredicted RBP13.62□□□□□ -0.23
UBE3B-210ENST00000539599 OCA2Q04671 838 aa13.62□□□□□ -0.23
UBE3B-210ENST00000539599 NR1D2Q14995 579 aa13.62□□□□□ -0.23
UBE3B-210ENST00000539599 ATG9BQ674R7 924 aa13.62□□□□□ -0.23
UBE3B-210ENST00000539599 Q6ZNX1 250 aa13.62□□□□□ -0.23
UBE3B-210ENST00000539599 TMC8Q8IU68 726 aa13.62□□□□□ -0.23
UBE3B-210ENST00000539599 SMYD1Q8NB12 490 aa13.62□□□□□ -0.23
UBE3B-210ENST00000539599 FIBINQ8TAL6 211 aa13.62□□□□□ -0.23
UBE3B-210ENST00000539599 OR4K3Q96R72 315 aa13.62□□□□□ -0.23
UBE3B-210ENST00000539599 RIOK2Q9BVS4 552 aaKnown RBP13.62□□□□□ -0.23
UBE3B-210ENST00000539599 PNMA8BQ9ULN7 279 aaPredicted RBP13.62□□□□□ -0.23
UBE3B-210ENST00000539599 A0A0C4DFX4 3053 aa13.62□□□□□ -0.23
UBE3B-210ENST00000539599 ZBBXA8MT70 800 aa13.62□□□□□ -0.23
UBE3B-210ENST00000539599 MAGEB17A8MXT2 336 aa13.62□□□□□ -0.23
UBE3B-210ENST00000539599 TTC34A8MYJ7 566 aa13.62□□□□□ -0.23
UBE3B-210ENST00000539599 TSPAN6O43657 245 aa13.62□□□□□ -0.23
UBE3B-210ENST00000539599 RFPL2O75678 378 aa13.62□□□□□ -0.23
UBE3B-210ENST00000539599 HPRP00739 348 aa13.62□□□□□ -0.23
UBE3B-210ENST00000539599 RETP07949 1114 aa13.62□□□□□ -0.23
UBE3B-210ENST00000539599 ACRP10323 421 aa13.62□□□□□ -0.23
UBE3B-210ENST00000539599 MASP1P48740 699 aa13.62□□□□□ -0.23
UBE3B-210ENST00000539599 GAB1Q13480 694 aa13.62□□□□□ -0.23
UBE3B-210ENST00000539599 RBM48Q5RL73 367 aaKnown RBP13.62□□□□□ -0.23
UBE3B-210ENST00000539599 ZZZ3Q8IYH5 903 aa13.62□□□□□ -0.23
UBE3B-210ENST00000539599 C2orf73Q8N5S3 287 aaPredicted RBP13.62□□□□□ -0.23
UBE3B-210ENST00000539599 FAR1Q8WVX9 515 aa13.62□□□□□ -0.23
UBE3B-210ENST00000539599 REXO5Q96IC2 774 aaKnown RBP13.62□□□□□ -0.23
UBE3B-210ENST00000539599 DNAJC11Q9NVH1 559 aa13.62□□□□□ -0.23
UBE3B-210ENST00000539599 C3orf18Q9UK00 162 aa13.62□□□□□ -0.23
UBE3B-210ENST00000539599 PSME2Q9UL46 239 aa13.62□□□□□ -0.23
UBE3B-210ENST00000539599 COQ6Q9Y2Z9 468 aa13.62□□□□□ -0.23
UBE3B-210ENST00000539599 SPEGQ15772 3267 aa13.62□□□□□ -0.23
UBE3B-210ENST00000539599 SCN2BO60939 215 aa13.61□□□□□ -0.23
UBE3B-210ENST00000539599 ITGB8P26012 769 aa13.61□□□□□ -0.23
UBE3B-210ENST00000539599 HOXD10P28358 340 aa13.61□□□□□ -0.23
UBE3B-210ENST00000539599 HOXA9P31269 272 aa13.61□□□□□ -0.23
UBE3B-210ENST00000539599 RAD23AP54725 363 aa13.61□□□□□ -0.23
UBE3B-210ENST00000539599 MVKQ03426 396 aa13.61□□□□□ -0.23
UBE3B-210ENST00000539599 GRSF1Q12849 480 aaKnown RBP eCLIP13.61□□□□□ -0.23
UBE3B-210ENST00000539599 COL9A2Q14055 689 aaPredicted RBP13.61□□□□□ -0.23
UBE3B-210ENST00000539599 DOC2AQ14183 400 aa13.61□□□□□ -0.23
UBE3B-210ENST00000539599 MPPE1Q53F39 396 aa13.61□□□□□ -0.23
UBE3B-210ENST00000539599 PERM1Q5SV97 790 aa13.61□□□□□ -0.23
UBE3B-210ENST00000539599 TCEAL8Q8IYN2 117 aa13.61□□□□□ -0.23
UBE3B-210ENST00000539599 ABHD11Q8NFV4 315 aa13.61□□□□□ -0.23
UBE3B-210ENST00000539599 OR4K1Q8NGD4 311 aa13.61□□□□□ -0.23
UBE3B-210ENST00000539599 OR52J3Q8NH60 311 aa13.61□□□□□ -0.23
UBE3B-210ENST00000539599 ECHDC3Q96DC8 303 aa13.61□□□□□ -0.23
UBE3B-210ENST00000539599 SLC29A3Q9BZD2 475 aa13.61□□□□□ -0.23
UBE3B-210ENST00000539599 SELENONQ9NZV5 590 aa13.61□□□□□ -0.23
UBE3B-210ENST00000539599 RAPGEFL1Q9UHV5 662 aa13.61□□□□□ -0.23
UBE3B-210ENST00000539599 ACSL6Q9UKU0 697 aa13.61□□□□□ -0.23
UBE3B-210ENST00000539599 ZNF106Q9H2Y7 1883 aaKnown RBP13.61□□□□□ -0.23
UBE3B-210ENST00000539599 ANTXRLA6NF34 631 aa13.61□□□□□ -0.23
UBE3B-210ENST00000539599 VIPP01282 170 aa13.61□□□□□ -0.23
UBE3B-210ENST00000539599 OR1E2P47887 323 aa13.61□□□□□ -0.23
UBE3B-210ENST00000539599 NCS1P62166 190 aa13.61□□□□□ -0.23
UBE3B-210ENST00000539599 CTF1Q16619 201 aa13.61□□□□□ -0.23
UBE3B-210ENST00000539599 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.61□□□□□ -0.23
UBE3B-210ENST00000539599 IGFN1Q86VF2 1251 aa13.61□□□□□ -0.23
UBE3B-210ENST00000539599 CENPSQ8N2Z9 138 aa13.61□□□□□ -0.23
UBE3B-210ENST00000539599 SVOPLQ8N434 492 aa13.61□□□□□ -0.23
UBE3B-210ENST00000539599 C1orf52Q8N6N3 182 aaKnown RBP13.61□□□□□ -0.23
UBE3B-210ENST00000539599 PXYLP1Q8TE99 480 aa13.61□□□□□ -0.23
UBE3B-210ENST00000539599 MUL1Q969V5 352 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms