RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 TTC34A8MYJ7 566 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 PSMD11O00231 422 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 CLIC1O00299 241 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 SLC9A3R1O14745 358 aaPredicted RBP16.67■□□□□ 0.26
BRCA2-204ENST00000530893 FPGTO14772 594 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 CLGNO14967 610 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 SLC16A6O15403 523 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 NOL3O60936 208 aaKnown RBP16.67■□□□□ 0.26
BRCA2-204ENST00000530893 LRATO95237 230 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 SRPRAP08240 638 aaKnown RBP16.67■□□□□ 0.26
BRCA2-204ENST00000530893 MYCLP1P12525 358 aaPredicted RBP16.67■□□□□ 0.26
BRCA2-204ENST00000530893 CD22P20273 847 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 ASMTP46597 345 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 IST1P53990 364 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 PNLIPRP1P54315 467 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 TPD52P55327 224 aaPredicted RBP16.67■□□□□ 0.26
BRCA2-204ENST00000530893 ACSM2AQ08AH3 577 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 DOC2AQ14183 400 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 UGT8Q16880 541 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 SLC44A4Q53GD3 710 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.67■□□□□ 0.26
BRCA2-204ENST00000530893 ACSM2BQ68CK6 577 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 ARL10Q8N8L6 244 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 MRPL43Q8N983 215 aaKnown RBP16.67■□□□□ 0.26
BRCA2-204ENST00000530893 FOPNLQ96NB1 174 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 CCM2Q9BSQ5 444 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 AMBRA1Q9C0C7 1298 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 GABARAPL1Q9H0R8 117 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 EPHX3Q9H6B9 360 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 ETAA1Q9NY74 926 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 STOX2Q9P2F5 926 aaPredicted RBP16.67■□□□□ 0.26
BRCA2-204ENST00000530893 PCDHGA8Q9Y5G5 932 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 SLC5A10A0PJK1 596 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 MAGEB17A8MXT2 336 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 H3BMQ9 156 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 KIAA0355O15063 1070 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 TSPAN6O43657 245 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 SCN2BO60939 215 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 RHOP08100 348 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 COX7A2P14406 83 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 SYN1P17600 705 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 HOXA9P31269 272 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 YAP1P46937 504 aaKnown RBP16.67■□□□□ 0.26
BRCA2-204ENST00000530893 ARHGDIAP52565 204 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 TMBIM6P55061 237 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 CTBSQ01459 385 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 LRRC74AQ0VAA2 488 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 KCNAB2Q13303 367 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 E2F2Q14209 437 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 VMACQ2NL98 169 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 C6orf141Q5SZD1 244 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 C10orf62Q5T681 223 aaPredicted RBP16.67■□□□□ 0.26
BRCA2-204ENST00000530893 CPZQ66K79 652 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 ERAP2Q6P179 960 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 ZDHHC21Q8IVQ6 265 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 FBXO15Q8NCQ5 510 aaPredicted RBP16.67■□□□□ 0.26
BRCA2-204ENST00000530893 OR56A3Q8NH54 315 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 COG8Q96MW5 612 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 IL1RAPQ9NPH3 570 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 CIDEBQ9UHD4 219 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 FBXO10Q9UK96 956 aa16.67■□□□□ 0.26
BRCA2-204ENST00000530893 LOC100130705A0A1B0GUX0 176 aa16.66■□□□□ 0.26
BRCA2-204ENST00000530893 TRIM43BA6NCK2 446 aa16.66■□□□□ 0.26
BRCA2-204ENST00000530893 E7EQ34 232 aa16.66■□□□□ 0.26
BRCA2-204ENST00000530893 NOBOXO60393 691 aa16.66■□□□□ 0.26
BRCA2-204ENST00000530893 DNAJB5O75953 348 aa16.66■□□□□ 0.26
BRCA2-204ENST00000530893 SEC14L2O76054 403 aa16.66■□□□□ 0.26
BRCA2-204ENST00000530893 ACRP10323 421 aa16.66■□□□□ 0.26
BRCA2-204ENST00000530893 GSTM2P28161 218 aa16.66■□□□□ 0.26
BRCA2-204ENST00000530893 RYKP34925 604 aa16.66■□□□□ 0.26
BRCA2-204ENST00000530893 MMP12P39900 470 aa16.66■□□□□ 0.26
BRCA2-204ENST00000530893 CCR3P51677 355 aa16.66■□□□□ 0.26
BRCA2-204ENST00000530893 WNT3P56703 355 aa16.66■□□□□ 0.26
BRCA2-204ENST00000530893 ERVFC1P60507 584 aa16.66■□□□□ 0.26
BRCA2-204ENST00000530893 LAPTM5Q13571 262 aa16.66■□□□□ 0.26
BRCA2-204ENST00000530893 VEZF1Q14119 521 aa16.66■□□□□ 0.26
BRCA2-204ENST00000530893 GPR107Q5VW38 600 aa16.66■□□□□ 0.26
BRCA2-204ENST00000530893 GPR155Q7Z3F1 870 aa16.66■□□□□ 0.26
BRCA2-204ENST00000530893 CAMKMTQ7Z624 323 aa16.66■□□□□ 0.26
BRCA2-204ENST00000530893 DCP2Q8IU60 420 aaKnown RBP16.66■□□□□ 0.26
BRCA2-204ENST00000530893 CROCCP3Q8IVE0 287 aa16.66■□□□□ 0.26
BRCA2-204ENST00000530893 SLC22A15Q8IZD6 547 aa16.66■□□□□ 0.26
BRCA2-204ENST00000530893 RASGEF1AQ8N9B8 481 aa16.66■□□□□ 0.26
BRCA2-204ENST00000530893 TRIM43Q96BQ3 446 aaPredicted RBP16.66■□□□□ 0.26
BRCA2-204ENST00000530893 PHF12Q96QT6 1004 aa16.66■□□□□ 0.26
BRCA2-204ENST00000530893 ADNPQ9H2P0 1102 aa16.66■□□□□ 0.26
BRCA2-204ENST00000530893 CORO2BQ9UQ03 480 aa16.66■□□□□ 0.26
BRCA2-204ENST00000530893 INSL6Q9Y581 213 aa16.66■□□□□ 0.26
BRCA2-204ENST00000530893 DOCK6Q96HP0 2047 aa16.66■□□□□ 0.26
BRCA2-204ENST00000530893 HS6ST1O60243 411 aa16.65■□□□□ 0.26
BRCA2-204ENST00000530893 KCNK5O95279 499 aa16.65■□□□□ 0.26
BRCA2-204ENST00000530893 CTSLP07711 333 aa16.65■□□□□ 0.26
BRCA2-204ENST00000530893 ELFN1P0C7U0 828 aa16.65■□□□□ 0.26
BRCA2-204ENST00000530893 ITGAMP11215 1152 aa16.65■□□□□ 0.26
BRCA2-204ENST00000530893 ENGP17813 658 aa16.65■□□□□ 0.26
BRCA2-204ENST00000530893 PPIBP23284 216 aaKnown RBP16.65■□□□□ 0.26
BRCA2-204ENST00000530893 TMEM115Q12893 351 aaPredicted RBP16.65■□□□□ 0.26
BRCA2-204ENST00000530893 NAE1Q13564 534 aa16.65■□□□□ 0.26
BRCA2-204ENST00000530893 NEDD8Q15843 81 aa16.65■□□□□ 0.26
BRCA2-204ENST00000530893 SPIN4Q56A73 249 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms