RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 POC1B-GALNT4F8VUJ3 575 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 CASC3O15234 703 aaKnown RBP5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 NPHS1O60500 1241 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 RFPL1O75677 317 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 SLCO2B1O94956 709 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 MT-CO3P00414 261 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 RPN2P04844 631 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 INHBAP08476 426 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 TYRP1P17643 537 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 ENDOUP21128 410 aaKnown RBP5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 ACADLP28330 430 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 NDUFS1P28331 727 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 TNFRSF8P28908 595 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 GP5P40197 560 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 GPR3P46089 330 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 RGS4P49798 205 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 PGGT1BP53609 377 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 CDKN2DP55273 166 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 CLDN6P56747 220 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 SESN3P58005 492 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 TAS2R39P59534 338 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 UBE2IP63279 158 aaKnown RBP5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 SPIDRQ14159 915 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 GPR18Q14330 331 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 SLC29A2Q14542 456 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 USP10Q14694 798 aaKnown RBP5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 EFTUD2Q15029 972 aaKnown RBP eCLIP5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 PLCL1Q15111 1095 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 KLHL38Q2WGJ6 581 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 ZNF658BQ4V348 819 aaPredicted RBP5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 UBAP2Q5T6F2 1119 aaKnown RBP5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 FAM45BPQ6NSW5 357 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 ARMC6Q6NXE6 501 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 PAQR3Q6TCH7 311 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 RAPH1Q70E73 1250 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 THAP5Q7Z6K1 395 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 GALNT7Q86SF2 657 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 ZC3HC1Q86WB0 502 aaKnown RBP5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 SPACA3Q8IXA5 215 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 RBM12BQ8IXT5 1001 aaKnown RBP5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 CPNE9Q8IYJ1 553 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 SLC22A15Q8IZD6 547 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 EIF1ADQ8N9N8 165 aaKnown RBP5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 CLRN3Q8NCR9 226 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 TMEM52Q8NDY8 209 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 ACVR1CQ8NER5 493 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 OR4E2Q8NGC2 313 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 OR10G6Q8NH81 332 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 FAM45AQ8TCE6 357 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 UBLCP1Q8WVY7 318 aaPredicted RBP5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 ZFPM2Q8WW38 1151 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 LCN9Q8WX39 176 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 ADAMTS14Q8WXS8 1223 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 NCSTNQ92542 709 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 KCNJ9Q92806 393 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 VPS39Q96JC1 886 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 GFM1Q96RP9 751 aaKnown RBP5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 CCDC77Q9BR77 488 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 RHOJQ9H4E5 214 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 MVB12BQ9H7P6 319 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 CAB39LQ9H9S4 337 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 RDH14Q9HBH5 336 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 SYTL2Q9HCH5 934 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 RRAGDQ9NQL2 400 aaPredicted RBP5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 POLG2Q9UHN1 485 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 SLC24A2Q9UI40 661 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 DUSP13Q9UII6 198 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 CDYLQ9Y232 598 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 MED16Q9Y2X0 877 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 MTO1Q9Y2Z2 717 aaKnown RBP5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 HEBP2Q9Y5Z4 205 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 SCN8AQ9UQD0 1980 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 SPTBN4Q9H254 2564 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 VPS13AQ96RL7 3174 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 KNTC1P50748 2209 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 ASXL3Q9C0F0 2248 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 IGHV1OR21-1A0A087WYE8 117 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 EXOC1LA0A1B0GW35 172 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 TMEM82A0PJX8 343 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 FAM149AA5PLN7 773 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 OR6C74A6NCV1 312 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 RIPK2O43353 540 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 WIPF1O43516 503 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 DUX1O43812 170 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 ZBTB14O43829 449 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 KDM1AO60341 852 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 KRT37O76014 449 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 UBXN7O94888 489 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 SNUPNO95149 360 aaKnown RBP5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 CPNE6O95741 557 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 SYF2O95926 243 aaKnown RBP5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 TOP3BO95985 862 aaKnown RBP5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 C1QAP02745 245 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 PROS1P07225 676 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 TUBBP07437 444 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 ITGA2BP08514 1039 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 HIST1H2AGP0C0S8 130 aaPredicted RBP5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 MPC1LP0DKB6 136 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms