RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 PWP1Q13610 501 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 LY6DQ14210 128 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 GBX1Q14549 363 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 C16orf72Q14CZ0 275 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 OR4D1Q15615 310 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 PYCR3Q53H96 274 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 ACSBG2Q5FVE4 666 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 PHF19Q5T6S3 580 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 NKAIN2Q5VXU1 208 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 ZNF385CQ66K41 422 aaPredicted RBP7.35□□□□□ -1.23
CLDN1-202ENST00000490800 INO80CQ6PI98 192 aaPredicted RBP7.35□□□□□ -1.23
CLDN1-202ENST00000490800 FAM47EQ6ZV65 393 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 ZNF605Q86T29 641 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 TRIM74Q86UV6 250 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 ZFAND4Q86XD8 727 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 PHYKPLQ8IUZ5 450 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 SLITRK4Q8IW52 837 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 ZNF843Q8N446 348 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 ZBTB2Q8N680 514 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 RASGEF1AQ8N9B8 481 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 OR6Y1Q8NGX8 325 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 RAB3IL1Q8TBN0 382 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 EEF1AKMT1Q8WVE0 214 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 SNRNP27Q8WVK2 155 aaKnown RBP7.35□□□□□ -1.23
CLDN1-202ENST00000490800 USP7Q93009 1102 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 KIAA1191Q96A73 305 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 SGF29Q96ES7 293 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 LINGO1Q96FE5 620 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 WBP1Q96G27 269 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 SCARF2Q96GP6 870 aaPredicted RBP7.35□□□□□ -1.23
CLDN1-202ENST00000490800 PDLIM5Q96HC4 596 aaKnown RBP7.35□□□□□ -1.23
CLDN1-202ENST00000490800 COX14Q96I36 57 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 PANX3Q96QZ0 392 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 CCNL2Q96S94 520 aaPredicted RBP7.35□□□□□ -1.23
CLDN1-202ENST00000490800 CMKLR1Q99788 373 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 FAM107BQ9H098 131 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 TFB2MQ9H5Q4 396 aaKnown RBP7.35□□□□□ -1.23
CLDN1-202ENST00000490800 ALG9Q9H6U8 611 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 SRA1Q9HD15 236 aaKnown RBP7.35□□□□□ -1.23
CLDN1-202ENST00000490800 SLCO1B3Q9NPD5 702 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 FGFR1OP2Q9NVK5 253 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 OXSMQ9NWU1 459 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 ZNHIT2Q9UHR6 403 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 ANKRD12Q6UB98 2062 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 KALRNO60229 2985 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 PRAMEF33A0A0G2JMD5 474 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 NPEPPSL1A6NEC2 478 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 OR2AG2A6NM03 316 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 F8W8V4 182 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 ZW10O43264 779 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 PRAMEF10O60809 474 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 TRIM13O60858 407 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 EDF1O60869 148 aaKnown RBP7.34□□□□□ -1.23
CLDN1-202ENST00000490800 SNNO75324 88 aaPredicted RBP7.34□□□□□ -1.23
CLDN1-202ENST00000490800 SERPINE1P05121 402 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 CCL4P13236 92 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 ATP5F1P24539 256 aaPredicted RBP7.34□□□□□ -1.23
CLDN1-202ENST00000490800 CCR7P32248 378 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 PRLHRP49683 370 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 DNAJB13P59910 316 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 OCRLQ01968 901 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 SRSF6Q13247 344 aaKnown RBP7.34□□□□□ -1.23
CLDN1-202ENST00000490800 STX3Q13277 289 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 TSNQ15631 228 aaKnown RBP7.34□□□□□ -1.23
CLDN1-202ENST00000490800 BCL7AQ4VC05 210 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 ATG16L1Q676U5 607 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 CGB2Q6NT52 195 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 TMEM220Q6QAJ8 160 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 NAPRTQ6XQN6 538 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 CYHR1Q6ZMK1 362 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 ZCCHC23Q6ZST2 131 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 OTOAQ7RTW8 1153 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 PIWIL4Q7Z3Z4 852 aaKnown RBP7.34□□□□□ -1.23
CLDN1-202ENST00000490800 PIGWQ7Z7B1 504 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 CPLX4Q7Z7G2 160 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 ADGRG6Q86SQ4 1221 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 DMRTC2Q8IXT2 367 aaPredicted RBP7.34□□□□□ -1.23
CLDN1-202ENST00000490800 BEND7Q8N7W2 519 aaPredicted RBP7.34□□□□□ -1.23
CLDN1-202ENST00000490800 RCBTB1Q8NDN9 531 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 PHC3Q8NDX5 983 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 PPP1R14CQ8TAE6 165 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 RHEBL1Q8TAI7 183 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 BCAS4Q8TDM0 211 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 ZNF473Q8WTR7 871 aaKnown RBP7.34□□□□□ -1.23
CLDN1-202ENST00000490800 TMEM159Q96B96 161 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 OR2M4Q96R27 311 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 ATOH8Q96SQ7 321 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 NUDT22Q9BRQ3 303 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 RSRP1Q9BUV0 290 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 GATA5Q9BWX5 397 aaPredicted RBP7.34□□□□□ -1.23
CLDN1-202ENST00000490800 TSSK1BQ9BXA7 367 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 SEMA4CQ9C0C4 833 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 OR2AG1Q9H205 316 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 TRIM39Q9HCM9 518 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 FOXJ2Q9P0K8 574 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 ATXN10Q9UBB4 475 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 PRKAB1Q9Y478 270 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 PCYT1BQ9Y5K3 369 aaPredicted RBP7.34□□□□□ -1.23
CLDN1-202ENST00000490800 KIF26BQ2KJY2 2108 aa7.34□□□□□ -1.23
CLDN1-202ENST00000490800 ATMQ13315 3056 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms