RNA–Protein interactions for RNA: ENST00000481004.1

LINC02040-201, Transcript of long intergenic non-protein coding RNA 2040, humanhuman

TSL 5 BASIC

Gene LINC02040, Length 556 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02040-201ENST00000481004 SNX1Q13596 522 aa5.37□□□□□ -1.55
LINC02040-201ENST00000481004 ITGA9Q13797 1035 aa5.37□□□□□ -1.55
LINC02040-201ENST00000481004 GTF2H3Q13889 308 aa5.37□□□□□ -1.55
LINC02040-201ENST00000481004 GPR19Q15760 415 aa5.37□□□□□ -1.55
LINC02040-201ENST00000481004 ZIC1Q15915 447 aa5.37□□□□□ -1.55
LINC02040-201ENST00000481004 PARP6Q2NL67 630 aa5.37□□□□□ -1.55
LINC02040-201ENST00000481004 ZRANB3Q5FWF4 1079 aa5.37□□□□□ -1.55
LINC02040-201ENST00000481004 CACHD1Q5VU97 1274 aa5.37□□□□□ -1.55
LINC02040-201ENST00000481004 ZDHHC20Q5W0Z9 365 aa5.37□□□□□ -1.55
LINC02040-201ENST00000481004 KRTAP5-3Q6L8H2 238 aa5.37□□□□□ -1.55
LINC02040-201ENST00000481004 FAM199XQ6PEV8 388 aaPredicted RBP5.37□□□□□ -1.55
LINC02040-201ENST00000481004 CEACAM20Q6UY09 585 aa5.37□□□□□ -1.55
LINC02040-201ENST00000481004 ARHGEF18Q6ZSZ5 1173 aa5.37□□□□□ -1.55
LINC02040-201ENST00000481004 SNX20Q7Z614 316 aa5.37□□□□□ -1.55
LINC02040-201ENST00000481004 LDB1Q86U70 411 aaPredicted RBP5.37□□□□□ -1.55
LINC02040-201ENST00000481004 SLC13A5Q86YT5 568 aaPredicted RBP5.37□□□□□ -1.55
LINC02040-201ENST00000481004 VRK3Q8IV63 474 aa5.37□□□□□ -1.55
LINC02040-201ENST00000481004 CFAP206Q8IYR0 622 aa5.37□□□□□ -1.55
LINC02040-201ENST00000481004 NLGN4XQ8N0W4 816 aa5.37□□□□□ -1.55
LINC02040-201ENST00000481004 NLGN4YQ8NFZ3 816 aaPredicted RBP5.37□□□□□ -1.55
LINC02040-201ENST00000481004 HM13Q8TCT9 377 aa5.37□□□□□ -1.55
LINC02040-201ENST00000481004 CT55Q8WUE5 264 aa5.37□□□□□ -1.55
LINC02040-201ENST00000481004 STARD8Q92502 1023 aa5.37□□□□□ -1.55
LINC02040-201ENST00000481004 ZNF501Q96CX3 271 aaPredicted RBP5.37□□□□□ -1.55
LINC02040-201ENST00000481004 SLC45A3Q96JT2 553 aa5.37□□□□□ -1.55
LINC02040-201ENST00000481004 C12orf66Q96MD2 445 aa5.37□□□□□ -1.55
LINC02040-201ENST00000481004 TTC25Q96NG3 672 aa5.37□□□□□ -1.55
LINC02040-201ENST00000481004 TEFMQ96QE5 360 aaKnown RBP5.37□□□□□ -1.55
LINC02040-201ENST00000481004 SPATA25Q9BR10 227 aa5.37□□□□□ -1.55
LINC02040-201ENST00000481004 TLR10Q9BXR5 811 aa5.37□□□□□ -1.55
LINC02040-201ENST00000481004 ULBP3Q9BZM4 244 aa5.37□□□□□ -1.55
LINC02040-201ENST00000481004 STN1Q9H668 368 aaKnown RBP5.37□□□□□ -1.55
LINC02040-201ENST00000481004 XKR8Q9H6D3 395 aa5.37□□□□□ -1.55
LINC02040-201ENST00000481004 KIR3DX1Q9H7L2 352 aa5.37□□□□□ -1.55
LINC02040-201ENST00000481004 LRRC40Q9H9A6 602 aa5.37□□□□□ -1.55
LINC02040-201ENST00000481004 COG4Q9H9E3 785 aa5.37□□□□□ -1.55
LINC02040-201ENST00000481004 GPN2Q9H9Y4 310 aaPredicted RBP5.37□□□□□ -1.55
LINC02040-201ENST00000481004 CATSPERZQ9NTU4 200 aa5.37□□□□□ -1.55
LINC02040-201ENST00000481004 AKAP7Q9P0M2 348 aaPredicted RBP5.37□□□□□ -1.55
LINC02040-201ENST00000481004 NDOR1Q9UHB4 597 aa5.37□□□□□ -1.55
LINC02040-201ENST00000481004 CROTQ9UKG9 612 aa5.37□□□□□ -1.55
LINC02040-201ENST00000481004 GUCA1BQ9UMX6 200 aa5.37□□□□□ -1.55
LINC02040-201ENST00000481004 ICKQ9UPZ9 632 aa5.37□□□□□ -1.55
LINC02040-201ENST00000481004 CDYLQ9Y232 598 aa5.37□□□□□ -1.55
LINC02040-201ENST00000481004 AAR2Q9Y312 384 aaKnown RBP5.37□□□□□ -1.55
LINC02040-201ENST00000481004 RPS6KL1Q9Y6S9 549 aa5.37□□□□□ -1.55
LINC02040-201ENST00000481004 SPTA1P02549 2419 aa5.37□□□□□ -1.55
LINC02040-201ENST00000481004 NUP210LQ5VU65 1888 aa5.37□□□□□ -1.55
LINC02040-201ENST00000481004 TCRBV7S3A2A0A539 114 aa5.36□□□□□ -1.55
LINC02040-201ENST00000481004 SLC5A10A0PJK1 596 aa5.36□□□□□ -1.55
LINC02040-201ENST00000481004 TLCD2A6NGC4 264 aa5.36□□□□□ -1.55
LINC02040-201ENST00000481004 SLC9B1P1A6NJY1 282 aa5.36□□□□□ -1.55
LINC02040-201ENST00000481004 EIF4E1BA6NMX2 242 aaKnown RBP5.36□□□□□ -1.55
LINC02040-201ENST00000481004 IQCF5A8MTL0 148 aa5.36□□□□□ -1.55
LINC02040-201ENST00000481004 TOX3O15405 576 aaPredicted RBP5.36□□□□□ -1.55
LINC02040-201ENST00000481004 ZW10O43264 779 aa5.36□□□□□ -1.55
LINC02040-201ENST00000481004 SUV39H1O43463 412 aa5.36□□□□□ -1.55
LINC02040-201ENST00000481004 KCNJ13O60928 360 aa5.36□□□□□ -1.55
LINC02040-201ENST00000481004 CRTAMO95727 393 aa5.36□□□□□ -1.55
LINC02040-201ENST00000481004 CAPN1P07384 714 aa5.36□□□□□ -1.55
LINC02040-201ENST00000481004 ATP1B2P14415 290 aaPredicted RBP5.36□□□□□ -1.55
LINC02040-201ENST00000481004 ST6GAL1P15907 406 aa5.36□□□□□ -1.55
LINC02040-201ENST00000481004 AMD1P17707 334 aa5.36□□□□□ -1.55
LINC02040-201ENST00000481004 VCLP18206 1134 aa5.36□□□□□ -1.55
LINC02040-201ENST00000481004 POLR2CP19387 275 aaPredicted RBP5.36□□□□□ -1.55
LINC02040-201ENST00000481004 MSNP26038 577 aaKnown RBP5.36□□□□□ -1.55
LINC02040-201ENST00000481004 ACADLP28330 430 aa5.36□□□□□ -1.55
LINC02040-201ENST00000481004 HALP42357 657 aa5.36□□□□□ -1.55
LINC02040-201ENST00000481004 KCNJ1P48048 391 aa5.36□□□□□ -1.55
LINC02040-201ENST00000481004 GABRA4P48169 554 aa5.36□□□□□ -1.55
LINC02040-201ENST00000481004 ACVR1Q04771 509 aa5.36□□□□□ -1.55
LINC02040-201ENST00000481004 ABHD18Q0P651 414 aa5.36□□□□□ -1.55
LINC02040-201ENST00000481004 GPS2Q13227 327 aa5.36□□□□□ -1.55
LINC02040-201ENST00000481004 TUBB3Q13509 450 aa5.36□□□□□ -1.55
LINC02040-201ENST00000481004 SEMA5AQ13591 1074 aa5.36□□□□□ -1.55
LINC02040-201ENST00000481004 IL10RAQ13651 578 aa5.36□□□□□ -1.55
LINC02040-201ENST00000481004 BOP1Q14137 746 aaKnown RBP5.36□□□□□ -1.55
LINC02040-201ENST00000481004 GRB7Q14451 532 aa5.36□□□□□ -1.55
LINC02040-201ENST00000481004 PRPSAP1Q14558 356 aa5.36□□□□□ -1.55
LINC02040-201ENST00000481004 P3H1Q32P28 736 aa5.36□□□□□ -1.55
LINC02040-201ENST00000481004 DNTTIP2Q5QJE6 756 aaKnown RBP5.36□□□□□ -1.55
LINC02040-201ENST00000481004 CPZQ66K79 652 aa5.36□□□□□ -1.55
LINC02040-201ENST00000481004 VASNQ6EMK4 673 aa5.36□□□□□ -1.55
LINC02040-201ENST00000481004 TTC27Q6P3X3 843 aa5.36□□□□□ -1.55
LINC02040-201ENST00000481004 PACS1Q6VY07 963 aa5.36□□□□□ -1.55
LINC02040-201ENST00000481004 ZNF517Q6ZMY9 492 aaPredicted RBP5.36□□□□□ -1.55
LINC02040-201ENST00000481004 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.36□□□□□ -1.55
LINC02040-201ENST00000481004 TRIM73Q86UV7 250 aa5.36□□□□□ -1.55
LINC02040-201ENST00000481004 STK32CQ86UX6 486 aa5.36□□□□□ -1.55
LINC02040-201ENST00000481004 ADGRF3Q8IZF5 1079 aa5.36□□□□□ -1.55
LINC02040-201ENST00000481004 D2HGDHQ8N465 521 aa5.36□□□□□ -1.55
LINC02040-201ENST00000481004 RNF10Q8N5U6 811 aaKnown RBP5.36□□□□□ -1.55
LINC02040-201ENST00000481004 UBL4BQ8N7F7 174 aa5.36□□□□□ -1.55
LINC02040-201ENST00000481004 AVL9Q8NBF6 648 aa5.36□□□□□ -1.55
LINC02040-201ENST00000481004 SYT8Q8NBV8 401 aa5.36□□□□□ -1.55
LINC02040-201ENST00000481004 CCDC112Q8NEF3 446 aa5.36□□□□□ -1.55
LINC02040-201ENST00000481004 OR4E2Q8NGC2 313 aa5.36□□□□□ -1.55
LINC02040-201ENST00000481004 OR52E1Q8NGJ3 308 aa5.36□□□□□ -1.55
LINC02040-201ENST00000481004 OR5AR1Q8NGP9 310 aa5.36□□□□□ -1.55
LINC02040-201ENST00000481004 KISS1RQ969F8 398 aaPredicted RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms