RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 AMD1P17707 334 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 PRPS1L1P21108 318 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 PAX7P23759 505 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 RPL5P46777 297 aaKnown RBP11.56□□□□□ -0.56
CTCFL-209ENST00000433949 ABRQ12979 859 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 XKR6Q5GH73 641 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 NHSL2Q5HYW2 709 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 KIAA1211LQ6NV74 962 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 SPRED1Q7Z699 444 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 CBR4Q8N4T8 237 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 KRTCAP2Q8N6L1 136 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 FLCNQ8NFG4 579 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 OR56A3Q8NH54 315 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 RAB7BQ96AH8 199 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 TSC22D3Q99576 134 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 WRAP53Q9BUR4 548 aaKnown RBP11.56□□□□□ -0.56
CTCFL-209ENST00000433949 YIPF3Q9GZM5 350 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 SLC6A17Q9H1V8 727 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 TRPV5Q9NQA5 729 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 PNPLA3Q9NST1 481 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 VPS29Q9UBQ0 182 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 DLGAP4Q9Y2H0 992 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 NEUROG3Q9Y4Z2 214 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 PCDHGA11Q9Y5H2 935 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 NUP214P35658 2090 aaPredicted RBP11.56□□□□□ -0.56
CTCFL-209ENST00000433949 TRBV5-3A0A0A0MS03 114 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 ELOVL7A1L3X0 281 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 TMEM202A6NGA9 273 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 C1QTNF3-AMACRE9PGA6 284 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 GSTA4O15217 222 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 TPST1O60507 370 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 SCELO95171 688 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 RASAL1O95294 804 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 ADRB3P13945 408 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 SDC1P18827 310 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 TNFRSF4P43489 277 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 NEK2P51955 445 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 MYBPC1Q00872 1141 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 SRSF11Q05519 484 aaKnown RBP11.56□□□□□ -0.56
CTCFL-209ENST00000433949 CHRNB3Q05901 458 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 GTF2H3Q13889 308 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 SELPLGQ14242 412 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.56□□□□□ -0.56
CTCFL-209ENST00000433949 NOXRED1Q6NXP6 359 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 IL17RCQ8NAC3 791 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 PHC3Q8NDX5 983 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 ZNF548Q8NEK5 533 aaPredicted RBP11.56□□□□□ -0.56
CTCFL-209ENST00000433949 RPLP0P6Q8NHW5 317 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 WDR20Q8TBZ3 569 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 TFAP2CQ92754 450 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 LINC00615Q96LM1 132 aaPredicted RBP11.56□□□□□ -0.56
CTCFL-209ENST00000433949 HHIPQ96QV1 700 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 CD320Q9NPF0 282 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 PRSS16Q9NQE7 514 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 OAZ3Q9UMX2 235 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 DUSP12Q9UNI6 340 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 GPR34Q9UPC5 381 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 RUVBL1Q9Y265 456 aaKnown RBP11.56□□□□□ -0.56
CTCFL-209ENST00000433949 INVSQ9Y283 1065 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 ITM2BQ9Y287 266 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 KCNE2Q9Y6J6 123 aa11.56□□□□□ -0.56
CTCFL-209ENST00000433949 TRPM6Q9BX84 2022 aa11.55□□□□□ -0.56
CTCFL-209ENST00000433949 SAC3D1A6NKF1 404 aa11.55□□□□□ -0.56
CTCFL-209ENST00000433949 RECQL5O94762 991 aaPredicted RBP11.55□□□□□ -0.56
CTCFL-209ENST00000433949 MYO1DO94832 1006 aa11.55□□□□□ -0.56
CTCFL-209ENST00000433949 GPR1P46091 355 aa11.55□□□□□ -0.56
CTCFL-209ENST00000433949 SH3BGRP55822 239 aaPredicted RBP11.55□□□□□ -0.56
CTCFL-209ENST00000433949 C21orf58P58505 322 aa11.55□□□□□ -0.56
CTCFL-209ENST00000433949 NAE1Q13564 534 aa11.55□□□□□ -0.56
CTCFL-209ENST00000433949 E2F2Q14209 437 aa11.55□□□□□ -0.56
CTCFL-209ENST00000433949 MLF2Q15773 248 aaPredicted RBP11.55□□□□□ -0.56
CTCFL-209ENST00000433949 TMEM52BQ4KMG9 183 aa11.55□□□□□ -0.56
CTCFL-209ENST00000433949 ZNF648Q5T619 568 aaPredicted RBP11.55□□□□□ -0.56
CTCFL-209ENST00000433949 Q6ZS52 159 aa11.55□□□□□ -0.56
CTCFL-209ENST00000433949 EPHX4Q8IUS5 362 aa11.55□□□□□ -0.56
CTCFL-209ENST00000433949 RIMKLAQ8IXN7 391 aa11.55□□□□□ -0.56
CTCFL-209ENST00000433949 SIX5Q8N196 739 aa11.55□□□□□ -0.56
CTCFL-209ENST00000433949 OR10A6Q8NH74 314 aa11.55□□□□□ -0.56
CTCFL-209ENST00000433949 REPS1Q96D71 796 aa11.55□□□□□ -0.56
CTCFL-209ENST00000433949 RNF145Q96MT1 663 aa11.55□□□□□ -0.56
CTCFL-209ENST00000433949 FAM129BQ96TA1 746 aa11.55□□□□□ -0.56
CTCFL-209ENST00000433949 HAUS8Q9BT25 410 aa11.55□□□□□ -0.56
CTCFL-209ENST00000433949 CHID1Q9BWS9 393 aa11.55□□□□□ -0.56
CTCFL-209ENST00000433949 PIF1Q9H611 641 aa11.55□□□□□ -0.56
CTCFL-209ENST00000433949 TRIM39Q9HCM9 518 aa11.55□□□□□ -0.56
CTCFL-209ENST00000433949 SLC2A4RGQ9NR83 387 aa11.55□□□□□ -0.56
CTCFL-209ENST00000433949 SPATA6Q9NWH7 488 aaPredicted RBP11.55□□□□□ -0.56
CTCFL-209ENST00000433949 ZNF639Q9UID6 485 aa11.55□□□□□ -0.56
CTCFL-209ENST00000433949 MUTYHQ9UIF7 546 aa11.55□□□□□ -0.56
CTCFL-209ENST00000433949 ARHGAP10A1A4S6 786 aa11.55□□□□□ -0.56
CTCFL-209ENST00000433949 KRBA1A5PL33 1030 aa11.55□□□□□ -0.56
CTCFL-209ENST00000433949 FAM220BPB1ANY3 271 aa11.55□□□□□ -0.56
CTCFL-209ENST00000433949 SPINT1O43278 529 aa11.55□□□□□ -0.56
CTCFL-209ENST00000433949 VEGFDO43915 354 aa11.55□□□□□ -0.56
CTCFL-209ENST00000433949 LZTS3O60299 673 aaPredicted RBP11.55□□□□□ -0.56
CTCFL-209ENST00000433949 PRAMEF4O60810 478 aa11.55□□□□□ -0.56
CTCFL-209ENST00000433949 SLC16A8O95907 504 aa11.55□□□□□ -0.56
CTCFL-209ENST00000433949 SOD1P00441 154 aa11.55□□□□□ -0.56
CTCFL-209ENST00000433949 RETP07949 1114 aa11.55□□□□□ -0.56
CTCFL-209ENST00000433949 SMIM18P0DKX4 95 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms