RNA–Protein interactions for RNA: ENST00000406548.5

EWSR1-207, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,207 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-207ENST00000406548 HIST1H2AJQ99878 128 aa17.92■□□□□ 0.46
EWSR1-207ENST00000406548 H2AFJQ9BTM1 129 aa17.92■□□□□ 0.46
EWSR1-207ENST00000406548 EBPLQ9BY08 206 aa17.92■□□□□ 0.46
EWSR1-207ENST00000406548 NDRG4Q9ULP0 352 aaKnown RBP17.92■□□□□ 0.46
EWSR1-207ENST00000406548 ZNF821O75541 412 aaPredicted RBP17.91■□□□□ 0.46
EWSR1-207ENST00000406548 EPN2O95208 641 aa17.91■□□□□ 0.46
EWSR1-207ENST00000406548 KCNK5O95279 499 aa17.91■□□□□ 0.46
EWSR1-207ENST00000406548 PRPS1L1P21108 318 aa17.91■□□□□ 0.46
EWSR1-207ENST00000406548 PSMB9P28065 219 aa17.91■□□□□ 0.46
EWSR1-207ENST00000406548 ALDH4A1P30038 563 aa17.91■□□□□ 0.46
EWSR1-207ENST00000406548 HOXA9P31269 272 aa17.91■□□□□ 0.46
EWSR1-207ENST00000406548 SERPINB10P48595 397 aa17.91■□□□□ 0.46
EWSR1-207ENST00000406548 HNMTP50135 292 aa17.91■□□□□ 0.46
EWSR1-207ENST00000406548 LSM3P62310 102 aaKnown RBP17.91■□□□□ 0.46
EWSR1-207ENST00000406548 ZXDBP98169 803 aa17.91■□□□□ 0.46
EWSR1-207ENST00000406548 HSPA14Q0VDF9 509 aa17.91■□□□□ 0.46
EWSR1-207ENST00000406548 ABRQ12979 859 aa17.91■□□□□ 0.46
EWSR1-207ENST00000406548 CLCA4Q14CN2 919 aa17.91■□□□□ 0.46
EWSR1-207ENST00000406548 MAD2L1BPQ15013 274 aaPredicted RBP17.91■□□□□ 0.46
EWSR1-207ENST00000406548 FRG2Q64ET8 278 aa17.91■□□□□ 0.46
EWSR1-207ENST00000406548 LRRC66Q68CR7 880 aa17.91■□□□□ 0.46
EWSR1-207ENST00000406548 CYP2U1Q7Z449 544 aa17.91■□□□□ 0.46
EWSR1-207ENST00000406548 VTCN1Q7Z7D3 282 aa17.91■□□□□ 0.46
EWSR1-207ENST00000406548 SVOPQ8N4V2 548 aa17.91■□□□□ 0.46
EWSR1-207ENST00000406548 ZNF540Q8NDQ6 660 aa17.91■□□□□ 0.46
EWSR1-207ENST00000406548 ASIC4Q96FT7 647 aa17.91■□□□□ 0.46
EWSR1-207ENST00000406548 HSH2DQ96JZ2 352 aa17.91■□□□□ 0.46
EWSR1-207ENST00000406548 FCRL1Q96LA6 429 aa17.91■□□□□ 0.46
EWSR1-207ENST00000406548 FRG2BQ96QU4 278 aa17.91■□□□□ 0.46
EWSR1-207ENST00000406548 RHNO1Q9BSD3 238 aa17.91■□□□□ 0.46
EWSR1-207ENST00000406548 CCNB1IP1Q9NPC3 277 aa17.91■□□□□ 0.46
EWSR1-207ENST00000406548 KIF17Q9P2E2 1029 aa17.91■□□□□ 0.46
EWSR1-207ENST00000406548 PABPN1LA6NDY0 278 aaKnown RBP17.91■□□□□ 0.46
EWSR1-207ENST00000406548 RGS10O43665 173 aa17.91■□□□□ 0.46
EWSR1-207ENST00000406548 NUAK1O60285 661 aa17.91■□□□□ 0.46
EWSR1-207ENST00000406548 FAM20BO75063 409 aa17.91■□□□□ 0.46
EWSR1-207ENST00000406548 NADKO95544 446 aaPredicted RBP17.91■□□□□ 0.46
EWSR1-207ENST00000406548 FADS2O95864 444 aaKnown RBP17.91■□□□□ 0.46
EWSR1-207ENST00000406548 OR56A5P0C7T3 313 aa17.91■□□□□ 0.46
EWSR1-207ENST00000406548 KDELR2P33947 212 aa17.91■□□□□ 0.46
EWSR1-207ENST00000406548 ALDH7A1P49419 539 aaKnown RBP17.91■□□□□ 0.46
EWSR1-207ENST00000406548 ST13P50502 369 aaKnown RBP17.91■□□□□ 0.46
EWSR1-207ENST00000406548 VBP1P61758 197 aa17.91■□□□□ 0.46
EWSR1-207ENST00000406548 MVKQ03426 396 aa17.91■□□□□ 0.46
EWSR1-207ENST00000406548 TPRG1Q6ZUI0 275 aa17.91■□□□□ 0.46
EWSR1-207ENST00000406548 SYT12Q8IV01 421 aa17.91■□□□□ 0.46
EWSR1-207ENST00000406548 ARL14EPQ8N8R7 260 aaPredicted RBP17.91■□□□□ 0.46
EWSR1-207ENST00000406548 ASB11Q8WXH4 323 aa17.91■□□□□ 0.46
EWSR1-207ENST00000406548 PAIP2BQ9ULR5 123 aaKnown RBP17.91■□□□□ 0.46
EWSR1-207ENST00000406548 SAMHD1Q9Y3Z3 626 aaKnown RBP17.91■□□□□ 0.46
EWSR1-207ENST00000406548 SERTM1A2A2V5 107 aa17.9■□□□□ 0.46
EWSR1-207ENST00000406548 MAGEB17A8MXT2 336 aa17.9■□□□□ 0.46
EWSR1-207ENST00000406548 PRAMEF4O60810 478 aa17.9■□□□□ 0.46
EWSR1-207ENST00000406548 GPX2P18283 190 aa17.9■□□□□ 0.46
EWSR1-207ENST00000406548 ITPKAP23677 461 aa17.9■□□□□ 0.46
EWSR1-207ENST00000406548 DGCR6Q14129 220 aa17.9■□□□□ 0.46
EWSR1-207ENST00000406548 SMN1Q16637 294 aaKnown RBP17.9■□□□□ 0.46
EWSR1-207ENST00000406548 UGT8Q16880 541 aa17.9■□□□□ 0.46
EWSR1-207ENST00000406548 DGKKQ5KSL6 1271 aa17.9■□□□□ 0.46
EWSR1-207ENST00000406548 PRAMEF9Q5VWM5 478 aa17.9■□□□□ 0.46
EWSR1-207ENST00000406548 CBLL1Q75N03 491 aa17.9■□□□□ 0.46
EWSR1-207ENST00000406548 PTOV1Q86YD1 416 aa17.9■□□□□ 0.46
EWSR1-207ENST00000406548 FAM217AQ8IXS0 508 aa17.9■□□□□ 0.46
EWSR1-207ENST00000406548 MFSD4AQ8N468 514 aa17.9■□□□□ 0.46
EWSR1-207ENST00000406548 OR2AP1Q8NGE2 309 aa17.9■□□□□ 0.46
EWSR1-207ENST00000406548 MYOCQ99972 504 aa17.9■□□□□ 0.46
EWSR1-207ENST00000406548 TSEN34Q9BSV6 310 aaKnown RBP17.9■□□□□ 0.46
EWSR1-207ENST00000406548 FBXO8Q9NRD0 319 aa17.9■□□□□ 0.46
EWSR1-207ENST00000406548 KRT84Q9NSB2 600 aa17.9■□□□□ 0.46
EWSR1-207ENST00000406548 DNAJC11Q9NVH1 559 aa17.9■□□□□ 0.46
EWSR1-207ENST00000406548 SLC22A14Q9Y267 594 aa17.9■□□□□ 0.46
EWSR1-207ENST00000406548 MICAL3Q7RTP6 2002 aa17.9■□□□□ 0.46
EWSR1-207ENST00000406548 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.9■□□□□ 0.46
EWSR1-207ENST00000406548 KRBA1A5PL33 1030 aa17.9■□□□□ 0.46
EWSR1-207ENST00000406548 HALP42357 657 aa17.9■□□□□ 0.46
EWSR1-207ENST00000406548 ITGA1P56199 1179 aa17.9■□□□□ 0.46
EWSR1-207ENST00000406548 WNT3P56703 355 aa17.9■□□□□ 0.46
EWSR1-207ENST00000406548 SRSF11Q05519 484 aaKnown RBP17.9■□□□□ 0.46
EWSR1-207ENST00000406548 LMAN2Q12907 356 aa17.9■□□□□ 0.46
EWSR1-207ENST00000406548 PERM1Q5SV97 790 aa17.9■□□□□ 0.46
EWSR1-207ENST00000406548 KIAA1614Q5VZ46 1190 aa17.9■□□□□ 0.46
EWSR1-207ENST00000406548 TPGS2Q68CL5 300 aa17.9■□□□□ 0.46
EWSR1-207ENST00000406548 ZNF621Q6ZSS3 439 aa17.9■□□□□ 0.46
EWSR1-207ENST00000406548 EIF3MQ7L2H7 374 aaKnown RBP17.9■□□□□ 0.46
EWSR1-207ENST00000406548 GPR155Q7Z3F1 870 aa17.9■□□□□ 0.46
EWSR1-207ENST00000406548 DNAJB7Q7Z6W7 309 aaPredicted RBP17.9■□□□□ 0.46
EWSR1-207ENST00000406548 ADCK1Q86TW2 530 aa17.9■□□□□ 0.46
EWSR1-207ENST00000406548 TSPYL5Q86VY4 417 aaPredicted RBP17.9■□□□□ 0.46
EWSR1-207ENST00000406548 VRK3Q8IV63 474 aa17.9■□□□□ 0.46
EWSR1-207ENST00000406548 RNF175Q8N4F7 328 aa17.9■□□□□ 0.46
EWSR1-207ENST00000406548 DYNC2LI1Q8TCX1 351 aa17.9■□□□□ 0.46
EWSR1-207ENST00000406548 ITPKCQ96DU7 683 aa17.9■□□□□ 0.46
EWSR1-207ENST00000406548 ASPSCR1Q9BZE9 553 aa17.9■□□□□ 0.46
EWSR1-207ENST00000406548 ACOT13Q9NPJ3 140 aa17.9■□□□□ 0.46
EWSR1-207ENST00000406548 PMF1-BGLAPU3KQ54 211 aa17.9■□□□□ 0.46
EWSR1-207ENST00000406548 IGLV3-16A0A075B6K0 115 aa17.89■□□□□ 0.45
EWSR1-207ENST00000406548 TMEM247A6NEH6 219 aa17.89■□□□□ 0.45
EWSR1-207ENST00000406548 PRMT3O60678 531 aa17.89■□□□□ 0.45
EWSR1-207ENST00000406548 MRPS14O60783 128 aaKnown RBP17.89■□□□□ 0.45
EWSR1-207ENST00000406548 SCN2BO60939 215 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms