RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 LRIF1Q5T3J3 769 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 THOC7Q6I9Y2 204 aaKnown RBP11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 GIPC3Q8TF64 312 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 C11orf24Q96F05 449 aaPredicted RBP11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 TUBGCP5Q96RT8 1024 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 TMEM209Q96SK2 561 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 TBX5Q99593 518 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 RNF39Q9H2S5 420 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 MARCH7Q9H992 704 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 SPATA7Q9P0W8 599 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 MAN2B2Q9Y2E5 1009 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 BCKDKO14874 412 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 ADAMTS3O15072 1205 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 TSPAN6O43657 245 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 HCKP08631 526 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 HSD3B2P26439 372 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 ZNF805Q5CZA5 627 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 SLC51AQ86UW1 340 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 PRELID2Q8N945 189 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 HM13Q8TCT9 377 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 TRIB2Q92519 343 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 UCK2Q9BZX2 261 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 DAPL1A0PJW8 107 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 C2CD4BA6NLJ0 364 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 H3BQ06 376 aaPredicted RBP11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 hCG_2039718K7EN88 272 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 ALOX15BO15296 676 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 C8orf89P0DMQ9 161 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 POU2F1P14859 743 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 DPP6P42658 865 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 SCN1BQ07699 218 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 CCSAPQ6IQ19 270 aaPredicted RBP11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 USP53Q70EK8 1073 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 DCUN1D3Q8IWE4 304 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 ZNF565Q8N9K5 539 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 ZDHHC1Q8WTX9 485 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 JPH3Q8WXH2 748 aaPredicted RBP11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 PYCR2Q96C36 320 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 CAMK1GQ96NX5 476 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 TRIM39Q9HCM9 518 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 ERVK-18Q9QC07 812 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 PCDHGA2Q9Y5H1 932 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 AP4B1Q9Y6B7 739 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 LTBP3Q9NS15 1303 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 GPR37L1O60883 481 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 CDC123O75794 336 aaPredicted RBP11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 SEMA4FO95754 770 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 PAK4O96013 591 aaPredicted RBP11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 PFKLP17858 780 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 NTSR1P30989 418 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 CHRNA4P43681 627 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 RAB8AP61006 207 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 ZNF542PQ5EBM4 170 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 RALGPS1Q5JS13 557 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 DENND5AQ6IQ26 1287 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 NLGN4XQ8N0W4 816 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 ZNF676Q8N7Q3 588 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 TRMT10AQ8TBZ6 339 aaKnown RBP11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 PXYLP1Q8TE99 480 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 WDR60Q8WVS4 1066 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 TMCO6Q96DC7 493 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 OMA1Q96E52 524 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 GRHPRQ9UBQ7 328 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 SH3BGRL2Q9UJC5 107 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 HS3ST4Q9Y661 456 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 ARHGEF28Q8N1W1 1705 aaKnown RBP11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 HSPA12AO43301 675 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 APOC1P02654 83 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 UBE2NP61088 152 aaKnown RBP11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 KBTBD2Q8IY47 623 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 TRPV1Q8NER1 839 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 SH3YL1Q96HL8 342 aaPredicted RBP11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 PTCHD1Q96NR3 888 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 ZNF347Q96SE7 839 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 HERC2P3Q9BVR0 1158 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 VPS29Q9UBQ0 182 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 TBC1D24Q9ULP9 559 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 PRPF19Q9UMS4 504 aaKnown RBP11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 PIP5K1BO14986 540 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 OR2B3O76000 313 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 IL12AP29459 219 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 DSTNP60981 165 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 GBX1Q14549 363 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 MLC1Q15049 377 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 GXYLT1Q4G148 440 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 CRTC1Q6UUV9 634 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 MSANTD1Q6ZTZ1 278 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 SLC5A11Q8WWX8 675 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 PIWIL1Q96J94 861 aaKnown RBP11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 NELL2Q99435 816 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 SDCBP2Q9H190 292 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 MUC13Q9H3R2 512 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 ABCB10Q9NRK6 738 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 GIN1Q9NXP7 522 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 NENFQ9UMX5 172 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 SEMA3DO95025 777 aa11.75□□□□□ -0.53
CACNA1C-213ENST00000399629 KAT7O95251 611 aa11.75□□□□□ -0.53
CACNA1C-213ENST00000399629 OAS1P00973 400 aaKnown RBP11.75□□□□□ -0.53
CACNA1C-213ENST00000399629 CDKN2BP42772 138 aa11.75□□□□□ -0.53
CACNA1C-213ENST00000399629 RABIFP47224 123 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms