RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 MED20Q9H944 212 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 CNOT10Q9H9A5 744 aaKnown RBP1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 DNAJC4Q9NNZ3 241 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 CHST11Q9NPF2 352 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 EPHA6Q9UF33 1036 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 SLC24A2Q9UI40 661 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 KLK13Q9UKR3 277 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 WIPI2Q9Y4P8 454 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 ANGPTL3Q9Y5C1 460 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 CSAG2Q9Y5P2 127 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 TRPV2Q9Y5S1 764 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 IL16Q14005 1332 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 A0A1W2PR80 420 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 RNF103O00237 685 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 UBE2CO00762 179 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 CLDN4O14493 209 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 EPHB6O15197 1021 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 PI15O43692 258 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 SRSF10O75494 262 aaKnown RBP1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 DUS4LO95620 317 aaKnown RBP1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 CLDN1O95832 211 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 CD59P13987 128 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 AKR1B1P15121 316 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 CYP11B2P19099 503 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 RAD52P43351 418 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 CCR10P46092 362 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 CSE1LP55060 971 aaKnown RBP1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 IRX4P78413 519 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 MYL7Q01449 175 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 RBPJQ06330 500 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 ACSM1Q08AH1 577 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 TRA2AQ13595 282 aaKnown RBP eCLIP1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 NECTIN1Q15223 517 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 MTHFSDQ2M296 383 aaKnown RBP1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 GPR33Q49SQ1 333 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 BMP2KLQ5H9B9 411 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 TCTEX1D4Q5JR98 221 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 ARMC4Q5T2S8 1044 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 WDR78Q5VTH9 848 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 OR4A47Q6IF82 309 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 ZNF343Q6P1L6 599 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 ENOSF1Q7L5Y1 443 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 ANKRD33Q7Z3H0 272 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 CENPVQ7Z7K6 275 aaPredicted RBP1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 CATSPERDQ86XM0 798 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 C17orf47Q8NEP4 570 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 ZNF519Q8TB69 540 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 TEKT4Q8WW24 435 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 PIK3R3Q92569 461 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 ARHGAP45Q92619 1136 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 PGAP3Q96FM1 320 aaPredicted RBP1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 C18orf12Q96KH6 178 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 FAM218AQ96MZ4 157 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 SPAG5Q96R06 1193 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 IWS1Q96ST2 819 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 CDCA3Q99618 268 aaPredicted RBP1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 NKX3-1Q99801 234 aaPredicted RBP1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 NUDT16L1Q9BRJ7 211 aaKnown RBP1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 APOL6Q9BWW8 343 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 TDRD1Q9BXT4 1180 aaKnown RBP1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 HOXD1Q9GZZ0 328 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 ACTL8Q9H568 366 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 PPANQ9NQ55 473 aaKnown RBP1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 GSN-AS1Q9NRJ2 163 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 STAU2Q9NUL3 570 aaKnown RBP eCLIP1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 NDE1Q9NXR1 346 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 NKIRAS2Q9NYR9 191 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 PRDM4Q9UKN5 801 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 ELF5Q9UKW6 265 aaPredicted RBP1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 PPP1R3CQ9UQK1 317 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 TNNQ9UQP3 1299 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 SMAD5-AS1Q9Y6J3 95 aa1.91□□□□□ -2.1
RNU6-541P-201ENST00000384709 HEG1Q9ULI3 1381 aa1.9□□□□□ -2.11
RNU6-541P-201ENST00000384709 A8MXE2 369 aa1.9□□□□□ -2.11
RNU6-541P-201ENST00000384709 ZNF195O14628 629 aa1.9□□□□□ -2.11
RNU6-541P-201ENST00000384709 PSMD10O75832 226 aa1.9□□□□□ -2.11
RNU6-541P-201ENST00000384709 DARSP14868 501 aaKnown RBP1.9□□□□□ -2.11
RNU6-541P-201ENST00000384709 ACHEP22303 614 aa1.9□□□□□ -2.11
RNU6-541P-201ENST00000384709 CD27P26842 260 aa1.9□□□□□ -2.11
RNU6-541P-201ENST00000384709 RBMS1P29558 406 aaKnown RBP1.9□□□□□ -2.11
RNU6-541P-201ENST00000384709 KRT2P35908 639 aa1.9□□□□□ -2.11
RNU6-541P-201ENST00000384709 MMP12P39900 470 aa1.9□□□□□ -2.11
RNU6-541P-201ENST00000384709 PTGER3P43115 390 aa1.9□□□□□ -2.11
RNU6-541P-201ENST00000384709 MATR3P43243 847 aaKnown RBP eCLIP1.9□□□□□ -2.11
RNU6-541P-201ENST00000384709 OR3A2P47893 321 aa1.9□□□□□ -2.11
RNU6-541P-201ENST00000384709 PGFP49763 221 aa1.9□□□□□ -2.11
RNU6-541P-201ENST00000384709 RAB28P51157 221 aa1.9□□□□□ -2.11
RNU6-541P-201ENST00000384709 PRELPP51888 382 aa1.9□□□□□ -2.11
RNU6-541P-201ENST00000384709 TMEM50BP56557 158 aa1.9□□□□□ -2.11
RNU6-541P-201ENST00000384709 SLC8A3P57103 927 aa1.9□□□□□ -2.11
RNU6-541P-201ENST00000384709 OR1D5P58170 312 aa1.9□□□□□ -2.11
RNU6-541P-201ENST00000384709 DLK1P80370 383 aa1.9□□□□□ -2.11
RNU6-541P-201ENST00000384709 TRAP1Q12931 704 aaKnown RBP1.9□□□□□ -2.11
RNU6-541P-201ENST00000384709 RIGQ13278 110 aa1.9□□□□□ -2.11
RNU6-541P-201ENST00000384709 VEZF1Q14119 521 aa1.9□□□□□ -2.11
RNU6-541P-201ENST00000384709 MTF1Q14872 753 aa1.9□□□□□ -2.11
RNU6-541P-201ENST00000384709 FASTKD3Q14CZ7 662 aaKnown RBP1.9□□□□□ -2.11
RNU6-541P-201ENST00000384709 PTPN14Q15678 1187 aa1.9□□□□□ -2.11
RNU6-541P-201ENST00000384709 KYNUQ16719 465 aa1.9□□□□□ -2.11
RNU6-541P-201ENST00000384709 TAF1BQ53T94 588 aaPredicted RBP1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms