RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Ndc1Q8VCB1 673 aaKnown RBP18.03■□□□□ 0.48
Trim71-201ENSMUST00000111816 Cox4i2Q91W29 172 aa18.03■□□□□ 0.48
Trim71-201ENSMUST00000111816 Tssk4Q9D411 328 aa18.03■□□□□ 0.48
Trim71-201ENSMUST00000111816 Olfr618K7N6B3 318 aa18.03■□□□□ 0.48
Trim71-201ENSMUST00000111816 Krt33bQ61897 404 aa18.03■□□□□ 0.48
Trim71-201ENSMUST00000111816 Tmem259Q8CIV2 574 aa18.03■□□□□ 0.48
Trim71-201ENSMUST00000111816 Dock10Q8BZN6 2150 aa18.03■□□□□ 0.48
Trim71-201ENSMUST00000111816 Stra6O70491 670 aa18.03■□□□□ 0.48
Trim71-201ENSMUST00000111816 Csf1rP09581 977 aa18.03■□□□□ 0.48
Trim71-201ENSMUST00000111816 Apba2P98084 750 aa18.03■□□□□ 0.48
Trim71-201ENSMUST00000111816 Olfr885Q7TRE0 309 aa18.03■□□□□ 0.48
Trim71-201ENSMUST00000111816 Slc39a13Q8BZH0 361 aa18.03■□□□□ 0.48
Trim71-201ENSMUST00000111816 Cmtm3Q99LJ5 184 aa18.03■□□□□ 0.48
Trim71-201ENSMUST00000111816 TprF6ZDS4 2431 aaKnown RBP18.03■□□□□ 0.48
Trim71-201ENSMUST00000111816 Gm45692D3Z0A0 150 aa18.03■□□□□ 0.48
Trim71-201ENSMUST00000111816 Phox2aQ62066 280 aa18.03■□□□□ 0.48
Trim71-201ENSMUST00000111816 Oxa1lQ8BGA9 433 aa18.03■□□□□ 0.48
Trim71-201ENSMUST00000111816 Atat1Q8K341 421 aa18.03■□□□□ 0.48
Trim71-201ENSMUST00000111816 Vmn1r21Q8R2C6 297 aa18.03■□□□□ 0.48
Trim71-201ENSMUST00000111816 Rab4bQ91ZR1 213 aa18.03■□□□□ 0.48
Trim71-201ENSMUST00000111816 Tmed9Q99KF1 235 aaKnown RBP18.02■□□□□ 0.48
Trim71-201ENSMUST00000111816 Nqo2Q9JI75 231 aa18.02■□□□□ 0.48
Trim71-201ENSMUST00000111816 Kif1aP33173 1695 aa18.02■□□□□ 0.48
Trim71-201ENSMUST00000111816 Mllt3A2AM29 569 aa18.02■□□□□ 0.48
Trim71-201ENSMUST00000111816 Vmn2r93L7N1Z9 857 aa18.02■□□□□ 0.48
Trim71-201ENSMUST00000111816 GstcdQ5RL51 634 aa18.02■□□□□ 0.48
Trim71-201ENSMUST00000111816 Papss1Q60967 624 aa18.02■□□□□ 0.48
Trim71-201ENSMUST00000111816 Ppp3r2Q63811 179 aa18.02■□□□□ 0.48
Trim71-201ENSMUST00000111816 Rftn1Q6A0D4 554 aa18.02■□□□□ 0.48
Trim71-201ENSMUST00000111816 MpstQ99J99 297 aa18.02■□□□□ 0.48
Trim71-201ENSMUST00000111816 Elp3Q9CZX0 547 aa18.02■□□□□ 0.48
Trim71-201ENSMUST00000111816 Ern2Q9Z2E3 911 aa18.02■□□□□ 0.48
Trim71-201ENSMUST00000111816 Obox6G3X9U1 347 aa18.02■□□□□ 0.48
Trim71-201ENSMUST00000111816 FhP97807 507 aa18.02■□□□□ 0.48
Trim71-201ENSMUST00000111816 Snx31Q6P8Y7 439 aa18.02■□□□□ 0.48
Trim71-201ENSMUST00000111816 Nt5dc1Q8C5P5 467 aa18.02■□□□□ 0.48
Trim71-201ENSMUST00000111816 Ablim1Q8K4G5 861 aa18.02■□□□□ 0.48
Trim71-201ENSMUST00000111816 Glo1Q9CPU0 184 aa18.02■□□□□ 0.48
Trim71-201ENSMUST00000111816 Klrc2Q9WTJ9 238 aa18.02■□□□□ 0.48
Trim71-201ENSMUST00000111816 Rgs11Q9Z2H1 443 aa18.02■□□□□ 0.48
Trim71-201ENSMUST00000111816 Knl1Q66JQ7 1612 aa18.02■□□□□ 0.48
Trim71-201ENSMUST00000111816 Syndig1lQ3USQ7 237 aa18.02■□□□□ 0.48
Trim71-201ENSMUST00000111816 Cers6Q8C172 384 aa18.02■□□□□ 0.48
Trim71-201ENSMUST00000111816 C1qbP14106 253 aa18.02■□□□□ 0.47
Trim71-201ENSMUST00000111816 Oser1Q9D722 291 aa18.02■□□□□ 0.47
Trim71-201ENSMUST00000111816 Chrm3Q9ERZ3 589 aa18.02■□□□□ 0.47
Trim71-201ENSMUST00000111816 Nt5c1aA3KFX0 365 aa18.02■□□□□ 0.47
Trim71-201ENSMUST00000111816 Gm10479K7N6H4 105 aa18.02■□□□□ 0.47
Trim71-201ENSMUST00000111816 Fam105aQ3TVP5 353 aa18.02■□□□□ 0.47
Trim71-201ENSMUST00000111816 4932443I19RikA0A286YE38 169 aa18.02■□□□□ 0.47
Trim71-201ENSMUST00000111816 AlpiF8VPQ6 554 aa18.02■□□□□ 0.47
Trim71-201ENSMUST00000111816 Prkar1bP12849 381 aa18.02■□□□□ 0.47
Trim71-201ENSMUST00000111816 Ruvbl1P60122 456 aaKnown RBP18.02■□□□□ 0.47
Trim71-201ENSMUST00000111816 Pramel5Q7TPY4 500 aa18.02■□□□□ 0.47
Trim71-201ENSMUST00000111816 Gm17124F6ZIG1 213 aa18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 Thsd4Q3UTY6 1018 aa18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 Psmf1Q8BHL8 271 aa18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 Tram1Q91V04 374 aa18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 Slc33a1Q99J27 550 aa18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 Man2a1P27046 1150 aa18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 SmsP97355 366 aa18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 Olfr328Q5NCD3 310 aa18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 Znf354aQ61751 572 aa18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 Lingo1Q9D1T0 614 aa18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 Sppl2cA2A6C4 690 aa18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 Pde12Q3TIU4 608 aa18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 Grhl3Q5FWH3 603 aa18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 Rnase12Q5GAM8 145 aa18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 Rad54bQ6PFE3 886 aa18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 Sdr16c5Q7TQA3 309 aa18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 Olfr389Q7TRX7 312 aa18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 Trmt10aQ8C1Z8 328 aaKnown RBP18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 Amigo3Q8C2S7 508 aa18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 Pcdhga11Q91XY8 933 aa18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 Trem2Q99NH8 227 aa18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 Fam136aQ9CR98 138 aa18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 Il1rl2Q9ERS7 574 aa18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 Avpr1bQ9WU02 421 aa18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 TnnQ80Z71 1560 aa18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 Itga10E9Q6R1 1167 aa18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 Hoxb9P20615 250 aa18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 Ctps2P70303 586 aa18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 Znf512Q69Z99 562 aa18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 Cpne5Q8JZW4 593 aa18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 Polr2hQ923G2 150 aa18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 Adamts15P59384 950 aa18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 Olfr304Q7TS03 333 aa18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 Hid1Q8R1F6 788 aa18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 Unc93b1Q8VCW4 598 aa18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 Cyp2j9Q924D1 502 aa18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 Ccdc107Q9DCC3 242 aa18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 1700031M16RikA0A087WSH0 82 aa18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 Pex10B1AUE5 324 aa18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 Aldh2P47738 519 aaKnown RBP18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 Zfp940Q8R2Q3 566 aa18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 Rcbtb2Q99LJ7 551 aa18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 Armc10Q9D0L7 306 aa18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 Smchd1Q6P5D8 2007 aaKnown RBP18.01■□□□□ 0.47
Trim71-201ENSMUST00000111816 Gsg1lD3Z7H4 322 aa18■□□□□ 0.47
Trim71-201ENSMUST00000111816 Ercc1P07903 298 aa18■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 26.2 ms