RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 ANKRD42Q8N9B4 389 aa15.05■□□□□ -0
PCDHGC3-204ENST00000617222 SNX31Q8N9S9 440 aa15.05■□□□□ -0
PCDHGC3-204ENST00000617222 OR2L3Q8NG85 312 aa15.05■□□□□ -0
PCDHGC3-204ENST00000617222 RDH11Q8TC12 318 aa15.05■□□□□ -0
PCDHGC3-204ENST00000617222 UBTD2Q8WUN7 234 aa15.05■□□□□ -0
PCDHGC3-204ENST00000617222 ADAMTS14Q8WXS8 1223 aa15.05■□□□□ -0
PCDHGC3-204ENST00000617222 TMEM74Q96NL1 305 aa15.05■□□□□ -0
PCDHGC3-204ENST00000617222 HAUS8Q9BT25 410 aa15.05■□□□□ -0
PCDHGC3-204ENST00000617222 MRPS30Q9NP92 439 aaKnown RBP15.05■□□□□ -0
PCDHGC3-204ENST00000617222 C1GALT1Q9NS00 363 aa15.05■□□□□ -0
PCDHGC3-204ENST00000617222 DNAJC11Q9NVH1 559 aa15.05■□□□□ -0
PCDHGC3-204ENST00000617222 COPG2Q9UBF2 871 aa15.05■□□□□ -0
PCDHGC3-204ENST00000617222 MID2Q9UJV3 735 aa15.05■□□□□ -0
PCDHGC3-204ENST00000617222 TNPO3Q9Y5L0 923 aaKnown RBP15.05■□□□□ -0
PCDHGC3-204ENST00000617222 ANKRD12Q6UB98 2062 aa15.05■□□□□ -0
PCDHGC3-204ENST00000617222 TMEM120BA0PK00 339 aa15.04■□□□□ -0
PCDHGC3-204ENST00000617222 K7EPI3 171 aa15.04■□□□□ -0
PCDHGC3-204ENST00000617222 PRAMEF10O60809 474 aa15.04■□□□□ -0
PCDHGC3-204ENST00000617222 CSO75390 466 aaKnown RBP15.04■□□□□ -0
PCDHGC3-204ENST00000617222 ZWINTO95229 277 aa15.04■□□□□ -0
PCDHGC3-204ENST00000617222 CCNDBP1O95273 360 aa15.04■□□□□ -0
PCDHGC3-204ENST00000617222 FKBP9O95302 570 aa15.04■□□□□ -0
PCDHGC3-204ENST00000617222 JUPP14923 745 aa15.04■□□□□ -0
PCDHGC3-204ENST00000617222 ST6GAL1P15907 406 aa15.04■□□□□ -0
PCDHGC3-204ENST00000617222 GRIA3P42263 894 aa15.04■□□□□ -0
PCDHGC3-204ENST00000617222 SEPHS1P49903 392 aa15.04■□□□□ -0
PCDHGC3-204ENST00000617222 PDX1P52945 283 aa15.04■□□□□ -0
PCDHGC3-204ENST00000617222 PRKAA2P54646 552 aa15.04■□□□□ -0
PCDHGC3-204ENST00000617222 ABATP80404 500 aa15.04■□□□□ -0
PCDHGC3-204ENST00000617222 ISXQ2M1V0 245 aa15.04■□□□□ -0
PCDHGC3-204ENST00000617222 FIGLAQ6QHK4 219 aa15.04■□□□□ -0
PCDHGC3-204ENST00000617222 LRRC70Q7Z2Q7 622 aa15.04■□□□□ -0
PCDHGC3-204ENST00000617222 PRSS42Q7Z5A4 293 aa15.04■□□□□ -0
PCDHGC3-204ENST00000617222 C17orf64Q86WR6 236 aa15.04■□□□□ -0
PCDHGC3-204ENST00000617222 SLC22A9Q8IVM8 553 aa15.04■□□□□ -0
PCDHGC3-204ENST00000617222 C10orf107Q8IVU9 208 aa15.04■□□□□ -0
PCDHGC3-204ENST00000617222 RCBTB1Q8NDN9 531 aa15.04■□□□□ -0
PCDHGC3-204ENST00000617222 TRAPPC9Q96Q05 1148 aa15.04■□□□□ -0
PCDHGC3-204ENST00000617222 SELENOSQ9BQE4 189 aa15.04■□□□□ -0
PCDHGC3-204ENST00000617222 PITPNM3Q9BZ71 974 aa15.04■□□□□ -0
PCDHGC3-204ENST00000617222 ACSS2Q9NR19 701 aa15.04■□□□□ -0
PCDHGC3-204ENST00000617222 CUEDC1Q9NWM3 386 aaPredicted RBP15.04■□□□□ -0
PCDHGC3-204ENST00000617222 SEMA5BQ9P283 1151 aa15.04■□□□□ -0
PCDHGC3-204ENST00000617222 OPTCQ9UBM4 332 aa15.04■□□□□ -0
PCDHGC3-204ENST00000617222 CLCA2Q9UQC9 943 aa15.04■□□□□ -0
PCDHGC3-204ENST00000617222 SH2B3Q9UQQ2 575 aa15.04■□□□□ -0
PCDHGC3-204ENST00000617222 DYRK1BQ9Y463 629 aa15.04■□□□□ -0
PCDHGC3-204ENST00000617222 ANGPTL3Q9Y5C1 460 aa15.04■□□□□ -0
PCDHGC3-204ENST00000617222 KCNE2Q9Y6J6 123 aa15.04■□□□□ -0
PCDHGC3-204ENST00000617222 TM9SF1O15321 606 aa15.03■□□□□ -0
PCDHGC3-204ENST00000617222 TOX3O15405 576 aaPredicted RBP15.03■□□□□ -0
PCDHGC3-204ENST00000617222 ZBTB11O95625 1053 aaPredicted RBP15.03■□□□□ -0
PCDHGC3-204ENST00000617222 IMPDH1P20839 514 aa15.03■□□□□ -0
PCDHGC3-204ENST00000617222 MAGP20916 626 aa15.03■□□□□ -0
PCDHGC3-204ENST00000617222 ALDH3A1P30838 453 aa15.03■□□□□ -0
PCDHGC3-204ENST00000617222 HPDP32754 393 aaPredicted RBP15.03■□□□□ -0
PCDHGC3-204ENST00000617222 ETV4P43268 484 aa15.03■□□□□ -0
PCDHGC3-204ENST00000617222 ID4P47928 161 aa15.03■□□□□ -0
PCDHGC3-204ENST00000617222 ARL4DP49703 201 aa15.03■□□□□ -0
PCDHGC3-204ENST00000617222 NFKB2Q00653 900 aa15.03■□□□□ -0
PCDHGC3-204ENST00000617222 CDC16Q13042 620 aa15.03■□□□□ -0
PCDHGC3-204ENST00000617222 TRA2AQ13595 282 aaKnown RBP eCLIP15.03■□□□□ -0
PCDHGC3-204ENST00000617222 TMPRSS12Q86WS5 348 aa15.03■□□□□ -0
PCDHGC3-204ENST00000617222 CHCHD4Q8N4Q1 142 aa15.03■□□□□ -0
PCDHGC3-204ENST00000617222 TEX9Q8N6V9 391 aa15.03■□□□□ -0
PCDHGC3-204ENST00000617222 KLHL6Q8WZ60 621 aa15.03■□□□□ -0
PCDHGC3-204ENST00000617222 CCDC126Q96EE4 140 aa15.03■□□□□ -0
PCDHGC3-204ENST00000617222 MOCOSQ96EN8 888 aa15.03■□□□□ -0
PCDHGC3-204ENST00000617222 DEPDC7Q96QD5 511 aa15.03■□□□□ -0
PCDHGC3-204ENST00000617222 DPH7Q9BTV6 452 aa15.03■□□□□ -0
PCDHGC3-204ENST00000617222 SLC6A20Q9NP91 592 aa15.03■□□□□ -0
PCDHGC3-204ENST00000617222 OXSMQ9NWU1 459 aa15.03■□□□□ -0
PCDHGC3-204ENST00000617222 IGKV1-8A0A0C4DH67 115 aa15.02■□□□□ -0
PCDHGC3-204ENST00000617222 FAM149AA5PLN7 773 aa15.02■□□□□ -0
PCDHGC3-204ENST00000617222 TMX2-CTNND1H3BSU7 103 aa15.02■□□□□ -0
PCDHGC3-204ENST00000617222 H7BY64 318 aa15.02■□□□□ -0
PCDHGC3-204ENST00000617222 ANKRD34CP0C6C1 535 aa15.02■□□□□ -0
PCDHGC3-204ENST00000617222 CDH1P12830 882 aa15.02■□□□□ -0
PCDHGC3-204ENST00000617222 CCKBRP32239 447 aa15.02■□□□□ -0
PCDHGC3-204ENST00000617222 HERVK_113P63132 956 aa15.02■□□□□ -0
PCDHGC3-204ENST00000617222 TARDBPQ13148 414 aaKnown RBP eCLIP15.02■□□□□ -0
PCDHGC3-204ENST00000617222 GTF2H2Q13888 395 aa15.02■□□□□ -0
PCDHGC3-204ENST00000617222 C16orf72Q14CZ0 275 aa15.02■□□□□ -0
PCDHGC3-204ENST00000617222 PCLAFQ15004 111 aa15.02■□□□□ -0
PCDHGC3-204ENST00000617222 ZIC1Q15915 447 aa15.02■□□□□ -0
PCDHGC3-204ENST00000617222 PDK4Q16654 411 aa15.02■□□□□ -0
PCDHGC3-204ENST00000617222 UNC50Q53HI1 259 aa15.02■□□□□ -0
PCDHGC3-204ENST00000617222 ZNF678Q5SXM1 525 aa15.02■□□□□ -0
PCDHGC3-204ENST00000617222 CATSPEREQ5SY80 951 aa15.02■□□□□ -0
PCDHGC3-204ENST00000617222 FCRL6Q6DN72 434 aa15.02■□□□□ -0
PCDHGC3-204ENST00000617222 GTF2H2CQ6P1K8 395 aa15.02■□□□□ -0
PCDHGC3-204ENST00000617222 RPS27LQ71UM5 84 aaKnown RBP15.02■□□□□ -0
PCDHGC3-204ENST00000617222 ADCK2Q7Z695 626 aa15.02■□□□□ -0
PCDHGC3-204ENST00000617222 MARCH9Q86YJ5 346 aa15.02■□□□□ -0
PCDHGC3-204ENST00000617222 CARFQ8N187 725 aa15.02■□□□□ -0
PCDHGC3-204ENST00000617222 CCNYL1Q8N7R7 359 aa15.02■□□□□ -0
PCDHGC3-204ENST00000617222 DCBLD1Q8N8Z6 715 aa15.02■□□□□ -0
PCDHGC3-204ENST00000617222 MGARPQ8TDB4 240 aa15.02■□□□□ -0
PCDHGC3-204ENST00000617222 PPP4R1Q8TF05 950 aa15.02■□□□□ -0
PCDHGC3-204ENST00000617222 SLC5A11Q8WWX8 675 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms