RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 ABT1Q9ULW3 272 aaKnown RBP12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 HSPE1-MOB4S4R3N1 261 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 RLN1P04808 185 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 CDKN2DP55273 166 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 RNF180Q86T96 592 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 SNX29P2Q8IUI4 249 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 FAM20CQ8IXL6 584 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 RFKQ969G6 155 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 MRGPRX2Q96LB1 330 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 PCYT2Q99447 389 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 WDR83Q9BRX9 315 aaKnown RBP12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 IFT52Q9Y366 437 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 PCDHGA8Q9Y5G5 932 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 H7C0S8 307 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 MANBAO00462 879 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 ACSL4O60488 711 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 FUCA1P04066 466 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 AKR1A1P14550 325 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 RPS3P23396 243 aaKnown RBP eCLIP12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 XKP51811 444 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 SMAD3P84022 425 aaKnown RBP12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 CDK5R2Q13319 367 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 SCARB2Q14108 478 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 PAGE3Q5JUK9 113 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 C10orf62Q5T681 223 aaPredicted RBP12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 ZNF431Q8TF32 576 aaPredicted RBP12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 PYCR2Q96C36 320 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 ZFP3Q96NJ6 502 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 CYP2S1Q96SQ9 504 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 PDCD10Q9BUL8 212 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 RNF39Q9H2S5 420 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 TPT1P8Q9HAU6 139 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 SEC14L4Q9UDX3 406 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 HS3ST4Q9Y661 456 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 KIAA0513O60268 411 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 FGBP02675 491 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 RPN2P04844 631 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 DGKEP52429 567 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 RAPSNQ13702 412 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 SPCS2Q15005 226 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 PON2Q15165 354 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 DESI1Q6ICB0 168 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 LYSMD3Q7Z3D4 306 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 DTWD1Q8N5C7 304 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 SHKBP1Q8TBC3 707 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 L3HYPDHQ96EM0 354 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 GSTO2Q9H4Y5 243 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 IGSF5Q9NSI5 407 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 KPNA3O00505 521 aaPredicted RBP12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 OR2B3O76000 313 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 CDH4P55283 916 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 NPRL3Q12980 569 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 SEMA3AQ14563 771 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 HEPACAMQ14CZ8 416 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 ZBTB6Q15916 424 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 PRSS48Q7RTY5 328 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 COL26A1Q96A83 441 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 MND1Q9BWT6 205 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 MS4A12Q9NXJ0 267 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 PCDHGB6Q9Y5F9 930 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 PCDHGA11Q9Y5H2 935 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 ZNF142P52746 1687 aaPredicted RBP12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 MITFO75030 526 aaPredicted RBP12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 CRHBPP24387 322 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 TIGD5Q53EQ6 642 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 NHSL2Q5HYW2 709 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 PHC2Q8IXK0 858 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 MGLLQ99685 303 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 SLC29A3Q9BZD2 475 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 TLR6Q9Y2C9 796 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 IRAK3Q9Y616 596 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 ZFP37Q9Y6Q3 630 aaPredicted RBP12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 PHRF1Q9P1Y6 1649 aaKnown RBP12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 C12orf71A8MTZ7 269 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 CAPN15O75808 1086 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 VIPP01282 170 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 AKIRIN2Q53H80 203 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 CCDC157Q569K6 752 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 FBXL22Q6P050 247 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 LARP4Q71RC2 724 aaKnown RBP eCLIP12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 ZNF534Q76KX8 674 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 NPWQ8N729 165 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 ANKRD49Q8WVL7 239 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 GEMIN6Q8WXD5 167 aaKnown RBP12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 SLC32A1Q9H598 525 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 SMURF1Q9HCE7 757 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 SPG21Q9NZD8 308 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 MARCH4Q9P2E8 410 aaPredicted RBP12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 VPS29Q9UBQ0 182 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 RIMKLBQ9ULI2 386 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 NCKAP1Q9Y2A7 1128 aa12.79□□□□□ -0.36
PCDHGB3-201ENST00000576222 TPST2O60704 377 aa12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 URODP06132 367 aa12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 LCKP06239 509 aa12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 C8GP07360 202 aa12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 STSP08842 583 aa12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 DCTP40126 519 aa12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 HTR2BP41595 481 aa12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 KANK2Q63ZY3 851 aa12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 MED27Q6P2C8 311 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms