RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 NUCB2P80303 420 aa3.74□□□□□ -1.81
CHD9-212ENST00000564641 CREB5Q02930 508 aa3.74□□□□□ -1.81
CHD9-212ENST00000564641 ZNF239Q16600 458 aaKnown RBP3.74□□□□□ -1.81
CHD9-212ENST00000564641 PCGF3Q3KNV8 242 aa3.74□□□□□ -1.81
CHD9-212ENST00000564641 HSP90AB3PQ58FF7 597 aa3.74□□□□□ -1.81
CHD9-212ENST00000564641 PLEKHS1Q5SXH7 462 aa3.74□□□□□ -1.81
CHD9-212ENST00000564641 TEX35Q5T0J7 233 aa3.74□□□□□ -1.81
CHD9-212ENST00000564641 ACSM2BQ68CK6 577 aa3.74□□□□□ -1.81
CHD9-212ENST00000564641 CAVIN1Q6NZI2 390 aaKnown RBP3.74□□□□□ -1.81
CHD9-212ENST00000564641 KLC3Q6P597 504 aa3.74□□□□□ -1.81
CHD9-212ENST00000564641 NCEH1Q6PIU2 408 aa3.74□□□□□ -1.81
CHD9-212ENST00000564641 CYP20A1Q6UW02 462 aa3.74□□□□□ -1.81
CHD9-212ENST00000564641 ANKRD23Q86SG2 305 aa3.74□□□□□ -1.81
CHD9-212ENST00000564641 KRT222Q8N1A0 295 aa3.74□□□□□ -1.81
CHD9-212ENST00000564641 AMER3Q8N944 861 aa3.74□□□□□ -1.81
CHD9-212ENST00000564641 GPATCH11Q8N954 259 aa3.74□□□□□ -1.81
CHD9-212ENST00000564641 SEMA4DQ92854 862 aa3.74□□□□□ -1.81
CHD9-212ENST00000564641 CCDC34Q96HJ3 373 aa3.74□□□□□ -1.81
CHD9-212ENST00000564641 NCAPGQ9BPX3 1015 aa3.74□□□□□ -1.81
CHD9-212ENST00000564641 RWDD1Q9H446 243 aaPredicted RBP3.74□□□□□ -1.81
CHD9-212ENST00000564641 RBM28Q9NW13 759 aaKnown RBP3.74□□□□□ -1.81
CHD9-212ENST00000564641 EHD2Q9NZN4 543 aa3.74□□□□□ -1.81
CHD9-212ENST00000564641 RSPH14Q9UHP6 348 aa3.74□□□□□ -1.81
CHD9-212ENST00000564641 MTMR6Q9Y217 621 aa3.74□□□□□ -1.81
CHD9-212ENST00000564641 KCNE2Q9Y6J6 123 aa3.74□□□□□ -1.81
CHD9-212ENST00000564641 KCPQ6ZWJ8 1503 aa3.74□□□□□ -1.81
CHD9-212ENST00000564641 DICER1Q9UPY3 1922 aaKnown RBP3.74□□□□□ -1.81
CHD9-212ENST00000564641 VIRMAQ69YN4 1812 aaKnown RBP3.73□□□□□ -1.81
CHD9-212ENST00000564641 SYNDIG1LA6NDD5 238 aa3.73□□□□□ -1.81
CHD9-212ENST00000564641 LIPT2A6NK58 231 aa3.73□□□□□ -1.81
CHD9-212ENST00000564641 TMEM189-UBE2V1I3L0A0 370 aa3.73□□□□□ -1.81
CHD9-212ENST00000564641 AP3D1O14617 1153 aa3.73□□□□□ -1.81
CHD9-212ENST00000564641 VILLO15195 856 aa3.73□□□□□ -1.81
CHD9-212ENST00000564641 PGM3O95394 542 aa3.73□□□□□ -1.81
CHD9-212ENST00000564641 AKR1B1P15121 316 aa3.73□□□□□ -1.81
CHD9-212ENST00000564641 PBX3P40426 434 aa3.73□□□□□ -1.81
CHD9-212ENST00000564641 SLC6A12P48065 614 aa3.73□□□□□ -1.81
CHD9-212ENST00000564641 SNX16P57768 344 aa3.73□□□□□ -1.81
CHD9-212ENST00000564641 MC1RQ01726 317 aa3.73□□□□□ -1.81
CHD9-212ENST00000564641 CEBPZQ03701 1054 aaKnown RBP3.73□□□□□ -1.81
CHD9-212ENST00000564641 CHAF1BQ13112 559 aa3.73□□□□□ -1.81
CHD9-212ENST00000564641 UBE2V1Q13404 147 aa3.73□□□□□ -1.81
CHD9-212ENST00000564641 RILPL1Q5EBL4 403 aa3.73□□□□□ -1.81
CHD9-212ENST00000564641 CFAP58Q5T655 872 aa3.73□□□□□ -1.81
CHD9-212ENST00000564641 PSRC1Q6PGN9 363 aaPredicted RBP3.73□□□□□ -1.81
CHD9-212ENST00000564641 SARM1Q6SZW1 724 aa3.73□□□□□ -1.81
CHD9-212ENST00000564641 SUSD1Q6UWL2 747 aa3.73□□□□□ -1.81
CHD9-212ENST00000564641 KIF6Q6ZMV9 814 aa3.73□□□□□ -1.81
CHD9-212ENST00000564641 CLEC17AQ6ZS10 378 aa3.73□□□□□ -1.81
CHD9-212ENST00000564641 SZRD1Q7Z422 152 aa3.73□□□□□ -1.81
CHD9-212ENST00000564641 MNS1Q8NEH6 495 aa3.73□□□□□ -1.81
CHD9-212ENST00000564641 SCFD2Q8WU76 684 aa3.73□□□□□ -1.81
CHD9-212ENST00000564641 TSPY26PQ9H489 355 aa3.73□□□□□ -1.81
CHD9-212ENST00000564641 SEPT11Q9NVA2 429 aaKnown RBP3.73□□□□□ -1.81
CHD9-212ENST00000564641 MIOSQ9NXC5 875 aa3.73□□□□□ -1.81
CHD9-212ENST00000564641 CTNNA3Q9UI47 895 aa3.73□□□□□ -1.81
CHD9-212ENST00000564641 HACL1Q9UJ83 578 aa3.73□□□□□ -1.81
CHD9-212ENST00000564641 TMEM5Q9Y2B1 443 aa3.73□□□□□ -1.81
CHD9-212ENST00000564641 B3GALT5Q9Y2C3 310 aa3.73□□□□□ -1.81
CHD9-212ENST00000564641 DLEC1Q9Y238 1755 aa3.73□□□□□ -1.81
CHD9-212ENST00000564641 HEG1Q9ULI3 1381 aa3.73□□□□□ -1.81
CHD9-212ENST00000564641 CCDC88AQ3V6T2 1871 aa3.73□□□□□ -1.81
CHD9-212ENST00000564641 AFDNP55196 1824 aaKnown RBP3.72□□□□□ -1.81
CHD9-212ENST00000564641 IGLV9-49A0A0B4J1Y8 123 aa3.72□□□□□ -1.81
CHD9-212ENST00000564641 MED19A0JLT2 244 aaPredicted RBP3.72□□□□□ -1.81
CHD9-212ENST00000564641 TMEM8BA6NDV4 472 aa3.72□□□□□ -1.81
CHD9-212ENST00000564641 H3BQ06 376 aaPredicted RBP3.72□□□□□ -1.81
CHD9-212ENST00000564641 OGG1O15527 345 aa3.72□□□□□ -1.81
CHD9-212ENST00000564641 DKC1O60832 514 aaKnown RBP eCLIP3.72□□□□□ -1.81
CHD9-212ENST00000564641 REC8O95072 547 aa3.72□□□□□ -1.81
CHD9-212ENST00000564641 GCNT3O95395 438 aa3.72□□□□□ -1.81
CHD9-212ENST00000564641 NGFP01138 241 aa3.72□□□□□ -1.81
CHD9-212ENST00000564641 ADRB2P07550 413 aa3.72□□□□□ -1.81
CHD9-212ENST00000564641 HMOX1P09601 288 aa3.72□□□□□ -1.81
CHD9-212ENST00000564641 FRMD6-AS1P0C7T7 363 aa3.72□□□□□ -1.81
CHD9-212ENST00000564641 GATA1P15976 413 aaPredicted RBP3.72□□□□□ -1.81
CHD9-212ENST00000564641 CASQ1P31415 396 aa3.72□□□□□ -1.81
CHD9-212ENST00000564641 KRT20P35900 424 aa3.72□□□□□ -1.81
CHD9-212ENST00000564641 TDO2P48775 406 aa3.72□□□□□ -1.81
CHD9-212ENST00000564641 GALCP54803 685 aa3.72□□□□□ -1.81
CHD9-212ENST00000564641 TAF13Q15543 124 aa3.72□□□□□ -1.81
CHD9-212ENST00000564641 SPECC1Q5M775 1068 aa3.72□□□□□ -1.81
CHD9-212ENST00000564641 SLC30A6Q6NXT4 461 aa3.72□□□□□ -1.81
CHD9-212ENST00000564641 TMCO3Q6UWJ1 677 aa3.72□□□□□ -1.81
CHD9-212ENST00000564641 FAM43BQ6ZT52 329 aaPredicted RBP3.72□□□□□ -1.81
CHD9-212ENST00000564641 DENND5BQ6ZUT9 1274 aa3.72□□□□□ -1.81
CHD9-212ENST00000564641 SLC16A9Q7RTY1 509 aa3.72□□□□□ -1.81
CHD9-212ENST00000564641 PPP1R42Q7Z4L9 355 aa3.72□□□□□ -1.81
CHD9-212ENST00000564641 CCDC91Q7Z6B0 441 aa3.72□□□□□ -1.81
CHD9-212ENST00000564641 CEP97Q8IW35 865 aa3.72□□□□□ -1.81
CHD9-212ENST00000564641 GPC2Q8N158 579 aa3.72□□□□□ -1.81
CHD9-212ENST00000564641 TTC39CQ8N584 583 aa3.72□□□□□ -1.81
CHD9-212ENST00000564641 ARHGEF2Q92974 986 aaKnown RBP3.72□□□□□ -1.81
CHD9-212ENST00000564641 NSL1Q96IY1 281 aa3.72□□□□□ -1.81
CHD9-212ENST00000564641 C18orf12Q96KH6 178 aa3.72□□□□□ -1.81
CHD9-212ENST00000564641 DACH2Q96NX9 599 aa3.72□□□□□ -1.81
CHD9-212ENST00000564641 TXLNGYQ9BZA5 131 aa3.72□□□□□ -1.81
CHD9-212ENST00000564641 P2RY12Q9H244 342 aa3.72□□□□□ -1.81
CHD9-212ENST00000564641 POLR1BQ9H9Y6 1135 aa3.72□□□□□ -1.81
CHD9-212ENST00000564641 RPS10P5Q9NQ39 176 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms